RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 Q9HAA7 133 aa12.73□□□□□ -0.37
SMN1-211ENST00000625245 OTORQ9NRC9 128 aa12.73□□□□□ -0.37
SMN1-211ENST00000625245 MBD2Q9UBB5 411 aa12.73□□□□□ -0.37
SMN1-211ENST00000625245 LRCOL1A6NCL2 159 aa12.72□□□□□ -0.37
SMN1-211ENST00000625245 F6UZH7 168 aa12.72□□□□□ -0.37
SMN1-211ENST00000625245 TYMSP04818 313 aa12.72□□□□□ -0.37
SMN1-211ENST00000625245 GATA1P15976 413 aaPredicted RBP12.72□□□□□ -0.37
SMN1-211ENST00000625245 CYCSP99999 105 aaKnown RBP12.72□□□□□ -0.37
SMN1-211ENST00000625245 OR10J3Q5JRS4 329 aa12.72□□□□□ -0.37
SMN1-211ENST00000625245 FAM74A1Q5RGS3 127 aa12.72□□□□□ -0.37
SMN1-211ENST00000625245 GOLT1AQ6ZVE7 132 aa12.72□□□□□ -0.37
SMN1-211ENST00000625245 ENKURQ8TC29 256 aa12.72□□□□□ -0.37
SMN1-211ENST00000625245 SMIM3Q9BZL3 60 aa12.72□□□□□ -0.37
SMN1-211ENST00000625245 TRAV8-6A0A0B4J262 113 aa12.71□□□□□ -0.37
SMN1-211ENST00000625245 TIRAPP58753 221 aa12.71□□□□□ -0.37
SMN1-211ENST00000625245 ASAH1Q13510 395 aa12.71□□□□□ -0.37
SMN1-211ENST00000625245 LINC01556Q5JQF7 62 aa12.71□□□□□ -0.37
SMN1-211ENST00000625245 Q6ZSN1 163 aa12.71□□□□□ -0.37
SMN1-211ENST00000625245 NTN5Q8WTR8 489 aaPredicted RBP12.71□□□□□ -0.37
SMN1-211ENST00000625245 TMEM70Q9BUB7 260 aa12.71□□□□□ -0.37
SMN1-211ENST00000625245 SDF2L1Q9HCN8 221 aa12.71□□□□□ -0.37
SMN1-211ENST00000625245 TREM1Q9NP99 234 aa12.71□□□□□ -0.37
SMN1-211ENST00000625245 SRRM2Q9UQ35 2752 aaKnown RBP12.71□□□□□ -0.38
SMN1-211ENST00000625245 TRAV8-1A0A0A6YYK1 113 aa12.7□□□□□ -0.38
SMN1-211ENST00000625245 FBLL1A6NHQ2 334 aaKnown RBP12.7□□□□□ -0.38
SMN1-211ENST00000625245 IBA57-AS1B1ANH7 110 aa12.7□□□□□ -0.38
SMN1-211ENST00000625245 IGHV3-30P01768 117 aa12.7□□□□□ -0.38
SMN1-211ENST00000625245 IGHV3-33P01772 117 aa12.7□□□□□ -0.38
SMN1-211ENST00000625245 PFN1P07737 140 aaKnown RBP12.7□□□□□ -0.38
SMN1-211ENST00000625245 IGHV3-30-3P0DP02 117 aa12.7□□□□□ -0.38
SMN1-211ENST00000625245 IGHV3-30-5P0DP03 117 aa12.7□□□□□ -0.38
SMN1-211ENST00000625245 TVP23CQ96ET8 276 aa12.7□□□□□ -0.38
SMN1-211ENST00000625245 KCNS1Q96KK3 526 aa12.7□□□□□ -0.38
SMN1-211ENST00000625245 NDUFA13Q9P0J0 144 aa12.7□□□□□ -0.38
SMN1-211ENST00000625245 HSPB11Q9Y547 144 aa12.7□□□□□ -0.38
SMN1-211ENST00000625245 SLC25A29Q8N8R3 303 aa12.69□□□□□ -0.38
SMN1-211ENST00000625245 PPP1R1CQ8WVI7 109 aa12.69□□□□□ -0.38
SMN1-211ENST00000625245 ASB13Q8WXK3 278 aa12.69□□□□□ -0.38
SMN1-211ENST00000625245 PRADC1Q9BSG0 188 aa12.69□□□□□ -0.38
SMN1-211ENST00000625245 MYCBP2O75592 4640 aa12.69□□□□□ -0.38
SMN1-211ENST00000625245 IGHV3-73A0A0B4J1V6 119 aa12.68□□□□□ -0.38
SMN1-211ENST00000625245 GNG5P63218 68 aa12.68□□□□□ -0.38
SMN1-211ENST00000625245 Q8N814 137 aa12.68□□□□□ -0.38
SMN1-211ENST00000625245 SGK494Q96LW2 274 aa12.68□□□□□ -0.38
SMN1-211ENST00000625245 A0A1W2PPV4 95 aa12.67□□□□□ -0.38
SMN1-211ENST00000625245 H2BFSP57053 126 aa12.67□□□□□ -0.38
SMN1-211ENST00000625245 ZNF876PQ49A33 203 aa12.67□□□□□ -0.38
SMN1-211ENST00000625245 FAM30AQ9NZY2 134 aa12.67□□□□□ -0.38
SMN1-211ENST00000625245 J3QL48 77 aa12.66□□□□□ -0.38
SMN1-211ENST00000625245 HMGB3O15347 200 aaKnown RBP12.66□□□□□ -0.38
SMN1-211ENST00000625245 RPL12P30050 165 aaKnown RBP12.66□□□□□ -0.38
SMN1-211ENST00000625245 ACOT6Q3I5F7 207 aaPredicted RBP12.66□□□□□ -0.38
SMN1-211ENST00000625245 PQLC2Q6ZP29 291 aa12.66□□□□□ -0.38
SMN1-211ENST00000625245 BOLA1Q9Y3E2 137 aa12.66□□□□□ -0.38
SMN1-211ENST00000625245 INMT-MINDY4F8WBC2 141 aa12.65□□□□□ -0.38
SMN1-211ENST00000625245 RS1O15537 224 aa12.65□□□□□ -0.38
SMN1-211ENST00000625245 MPC2O95563 127 aa12.65□□□□□ -0.38
SMN1-211ENST00000625245 RHOHQ15669 191 aa12.65□□□□□ -0.38
SMN1-211ENST00000625245 CFAP126Q5VTH2 177 aa12.65□□□□□ -0.38
SMN1-211ENST00000625245 DPPA3Q6W0C5 159 aa12.65□□□□□ -0.38
SMN1-211ENST00000625245 ARL6IP6Q8N6S5 226 aa12.65□□□□□ -0.38
SMN1-211ENST00000625245 S100ZQ8WXG8 99 aa12.65□□□□□ -0.38
SMN1-211ENST00000625245 NDFIP1Q9BT67 221 aa12.65□□□□□ -0.38
SMN1-211ENST00000625245 RAB2AP61019 212 aa12.64□□□□□ -0.39
SMN1-211ENST00000625245 LELP1Q5T871 98 aa12.64□□□□□ -0.39
SMN1-211ENST00000625245 TRBV6-4A0A1B0GX49 114 aa12.63□□□□□ -0.39
SMN1-211ENST00000625245 SSNA1O43805 119 aa12.63□□□□□ -0.39
SMN1-211ENST00000625245 CIDEAO60543 219 aa12.63□□□□□ -0.39
SMN1-211ENST00000625245 PET100P0DJ07 73 aa12.63□□□□□ -0.39
SMN1-211ENST00000625245 ATP6V0E2Q8NHE4 81 aa12.63□□□□□ -0.39
SMN1-211ENST00000625245 TM2D2Q9BX73 214 aa12.63□□□□□ -0.39
SMN1-211ENST00000625245 GTSF1LQ9H1H1 148 aa12.63□□□□□ -0.39
SMN1-211ENST00000625245 WFDC1Q9HC57 220 aa12.63□□□□□ -0.39
SMN1-211ENST00000625245 ZNF80P51504 273 aaPredicted RBP12.62□□□□□ -0.39
SMN1-211ENST00000625245 OR10G9Q8NGN4 311 aa12.62□□□□□ -0.39
SMN1-211ENST00000625245 OR10G7Q8NGN6 311 aa12.62□□□□□ -0.39
SMN1-211ENST00000625245 C11orf21Q9P2W6 132 aa12.62□□□□□ -0.39
SMN1-211ENST00000625245 PGPEP1LA6NFU8 196 aa12.61□□□□□ -0.39
SMN1-211ENST00000625245 TAAR5O14804 337 aa12.61□□□□□ -0.39
SMN1-211ENST00000625245 UPK1BO75841 260 aa12.61□□□□□ -0.39
SMN1-211ENST00000625245 GCGP01275 180 aa12.61□□□□□ -0.39
SMN1-211ENST00000625245 TMEM75Q8N9X5 138 aa12.61□□□□□ -0.39
SMN1-211ENST00000625245 ARL14EPLP0DKL9 152 aa12.6□□□□□ -0.39
SMN1-211ENST00000625245 WFDC2Q14508 124 aa12.6□□□□□ -0.39
SMN1-211ENST00000625245 ZNF506Q5JVG8 444 aa12.6□□□□□ -0.39
SMN1-211ENST00000625245 LINC00299Q6ZSB3 139 aa12.6□□□□□ -0.39
SMN1-211ENST00000625245 Q8N3U1 123 aa12.6□□□□□ -0.39
SMN1-211ENST00000625245 C9orf85Q96MD7 179 aa12.6□□□□□ -0.39
SMN1-211ENST00000625245 DNAH8Q96JB1 4490 aa12.6□□□□□ -0.39
SMN1-211ENST00000625245 SERTM2A0A1B0GWG4 89 aa12.59□□□□□ -0.39
SMN1-211ENST00000625245 K7EQM0 130 aa12.59□□□□□ -0.39
SMN1-211ENST00000625245 LECT2O14960 151 aa12.59□□□□□ -0.39
SMN1-211ENST00000625245 C1QBP02746 253 aa12.59□□□□□ -0.39
SMN1-211ENST00000625245 MGST1P10620 155 aaKnown RBP12.59□□□□□ -0.39
SMN1-211ENST00000625245 LAGE3Q14657 143 aa12.59□□□□□ -0.39
SMN1-211ENST00000625245 PSG8Q9UQ74 426 aa12.59□□□□□ -0.39
SMN1-211ENST00000625245 GAGE12JA6NER3 117 aa12.58□□□□□ -0.4
SMN1-211ENST00000625245 PLA2G1BP04054 148 aaKnown RBP12.58□□□□□ -0.4
SMN1-211ENST00000625245 TCRAP04437 139 aa12.58□□□□□ -0.4
SMN1-211ENST00000625245 CDC34P49427 236 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms