RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 H3BUT2 72 aa13.56□□□□□ -0.24
PCF11-207ENST00000624931 SMIM13P0DJ93 91 aa13.56□□□□□ -0.24
PCF11-207ENST00000624931 C5orf56Q8N8D9 126 aa13.56□□□□□ -0.24
PCF11-207ENST00000624931 MYO9AB2RTY4 2548 aa13.56□□□□□ -0.24
PCF11-207ENST00000624931 TLN2Q9Y4G6 2542 aa13.56□□□□□ -0.24
PCF11-207ENST00000624931 A0A1W2PPM0 123 aa13.55□□□□□ -0.24
PCF11-207ENST00000624931 A6NDX4 124 aa13.55□□□□□ -0.24
PCF11-207ENST00000624931 LINC01548A6NM66 108 aa13.55□□□□□ -0.24
PCF11-207ENST00000624931 IGHV4-59P01825 116 aa13.55□□□□□ -0.24
PCF11-207ENST00000624931 FABP2P12104 132 aa13.55□□□□□ -0.24
PCF11-207ENST00000624931 EVI2AP22794 236 aa13.55□□□□□ -0.24
PCF11-207ENST00000624931 ASCL2Q99929 193 aa13.55□□□□□ -0.24
PCF11-207ENST00000624931 MOB4Q9Y3A3 225 aa13.55□□□□□ -0.24
PCF11-207ENST00000624931 IGKV2-40A0A087WW87 121 aaPredicted RBP13.54□□□□□ -0.24
PCF11-207ENST00000624931 G3V4G9 280 aa13.54□□□□□ -0.24
PCF11-207ENST00000624931 IGKV2D-40P01614 121 aaPredicted RBP13.54□□□□□ -0.24
PCF11-207ENST00000624931 NEGR1Q7Z3B1 354 aa13.54□□□□□ -0.24
PCF11-207ENST00000624931 RNF185Q96GF1 192 aa13.54□□□□□ -0.24
PCF11-207ENST00000624931 ACANP16112 2415 aa13.54□□□□□ -0.24
PCF11-207ENST00000624931 NMUP48645 174 aa13.53□□□□□ -0.24
PCF11-207ENST00000624931 NOTCH2Q04721 2471 aa13.53□□□□□ -0.24
PCF11-207ENST00000624931 PRSS47A8MTI9 375 aa13.53□□□□□ -0.24
PCF11-207ENST00000624931 F8W735 103 aaPredicted RBP13.53□□□□□ -0.24
PCF11-207ENST00000624931 ATP6V0E1O15342 81 aa13.52□□□□□ -0.25
PCF11-207ENST00000624931 FOXE3Q13461 319 aa13.52□□□□□ -0.25
PCF11-207ENST00000624931 Q8N8P6 123 aa13.52□□□□□ -0.25
PCF11-207ENST00000624931 JMJD8Q96S16 334 aa13.52□□□□□ -0.25
PCF11-207ENST00000624931 SLC50A1Q9BRV3 221 aa13.52□□□□□ -0.25
PCF11-207ENST00000624931 SPCS1Q9Y6A9 102 aa13.52□□□□□ -0.25
PCF11-207ENST00000624931 ZFHX3Q15911 3703 aa13.52□□□□□ -0.25
PCF11-207ENST00000624931 IGKCP01834 107 aa13.51□□□□□ -0.25
PCF11-207ENST00000624931 ORM1P02763 201 aa13.51□□□□□ -0.25
PCF11-207ENST00000624931 LEPP41159 167 aa13.51□□□□□ -0.25
PCF11-207ENST00000624931 ODF1Q14990 250 aa13.51□□□□□ -0.25
PCF11-207ENST00000624931 TAL2Q16559 108 aa13.51□□□□□ -0.25
PCF11-207ENST00000624931 KLK9Q2XQG4 91 aa13.51□□□□□ -0.25
PCF11-207ENST00000624931 C9orf139Q6ZV77 190 aa13.51□□□□□ -0.25
PCF11-207ENST00000624931 SMR3AQ99954 134 aa13.51□□□□□ -0.25
PCF11-207ENST00000624931 YAE1D1Q9NRH1 226 aa13.51□□□□□ -0.25
PCF11-207ENST00000624931 KLK9Q9UKQ9 250 aa13.51□□□□□ -0.25
PCF11-207ENST00000624931 TNFRSF6BO95407 300 aa13.5□□□□□ -0.25
PCF11-207ENST00000624931 ECSCRQ19T08 205 aa13.5□□□□□ -0.25
PCF11-207ENST00000624931 MRPL53Q96EL3 112 aaKnown RBP13.5□□□□□ -0.25
PCF11-207ENST00000624931 DKK2Q9UBU2 259 aa13.5□□□□□ -0.25
PCF11-207ENST00000624931 SONP18583 2426 aaKnown RBP13.5□□□□□ -0.25
PCF11-207ENST00000624931 DPM2O94777 84 aa13.5□□□□□ -0.25
PCF11-207ENST00000624931 SAMD5Q5TGI4 173 aa13.5□□□□□ -0.25
PCF11-207ENST00000624931 PCP2Q8IVA1 136 aa13.5□□□□□ -0.25
PCF11-207ENST00000624931 VGLL1Q99990 258 aa13.5□□□□□ -0.25
PCF11-207ENST00000624931 SMAD5-AS1Q9Y6J3 95 aa13.5□□□□□ -0.25
PCF11-207ENST00000624931 SMKR1H3BMG3 65 aa13.49□□□□□ -0.25
PCF11-207ENST00000624931 PRSS1P07477 247 aa13.49□□□□□ -0.25
PCF11-207ENST00000624931 CTSGP08311 255 aa13.49□□□□□ -0.25
PCF11-207ENST00000624931 ZNF80P51504 273 aaPredicted RBP13.49□□□□□ -0.25
PCF11-207ENST00000624931 Q6ZS46 218 aa13.49□□□□□ -0.25
PCF11-207ENST00000624931 LINC00527Q9UJ94 153 aa13.49□□□□□ -0.25
PCF11-207ENST00000624931 HHLA3Q9XRX5 114 aa13.49□□□□□ -0.25
PCF11-207ENST00000624931 G3V318 75 aa13.48□□□□□ -0.25
PCF11-207ENST00000624931 BLCAPP62952 87 aa13.48□□□□□ -0.25
PCF11-207ENST00000624931 S4R3C0 116 aa13.48□□□□□ -0.25
PCF11-207ENST00000624931 IGHG4P01861 327 aa13.47□□□□□ -0.25
PCF11-207ENST00000624931 Q6YL49 198 aa13.47□□□□□ -0.25
PCF11-207ENST00000624931 DUX5Q96PT3 197 aa13.47□□□□□ -0.25
PCF11-207ENST00000624931 TM2D2Q9BX73 214 aa13.47□□□□□ -0.25
PCF11-207ENST00000624931 HOXA3O43365 443 aaPredicted RBP13.47□□□□□ -0.25
PCF11-207ENST00000624931 ZNF575Q86XF7 245 aa13.47□□□□□ -0.25
PCF11-207ENST00000624931 MYOZ3Q8TDC0 251 aa13.47□□□□□ -0.25
PCF11-207ENST00000624931 CHAC1Q9BUX1 264 aa13.47□□□□□ -0.25
PCF11-207ENST00000624931 Q8TAT8 98 aa13.46□□□□□ -0.25
PCF11-207ENST00000624931 BAHCC1Q9P281 2608 aa13.46□□□□□ -0.25
PCF11-207ENST00000624931 IGHV4-4A0A075B6R2 117 aa13.45□□□□□ -0.26
PCF11-207ENST00000624931 SAP30O75446 220 aa13.45□□□□□ -0.26
PCF11-207ENST00000624931 FXYD7P58549 80 aa13.45□□□□□ -0.26
PCF11-207ENST00000624931 FAM110DQ8TAY7 271 aaPredicted RBP13.45□□□□□ -0.26
PCF11-207ENST00000624931 RAB37Q96AX2 223 aa13.45□□□□□ -0.26
PCF11-207ENST00000624931 GCSHP23434 173 aa13.44□□□□□ -0.26
PCF11-207ENST00000624931 TMEM95Q3KNT9 176 aa13.44□□□□□ -0.26
PCF11-207ENST00000624931 OTOGQ6ZRI0 2925 aa13.44□□□□□ -0.26
PCF11-207ENST00000624931 C18orf15Q96N68 181 aa13.44□□□□□ -0.26
PCF11-207ENST00000624931 MXRA5Q9NR99 2828 aa13.44□□□□□ -0.26
PCF11-207ENST00000624931 IGLV2-18A0A075B6J9 118 aa13.44□□□□□ -0.26
PCF11-207ENST00000624931 LINC01619G3V211 115 aa13.44□□□□□ -0.26
PCF11-207ENST00000624931 LAGE3Q14657 143 aa13.44□□□□□ -0.26
PCF11-207ENST00000624931 CEND1Q8N111 149 aa13.44□□□□□ -0.26
PCF11-207ENST00000624931 TMEM158Q8WZ71 300 aa13.44□□□□□ -0.26
PCF11-207ENST00000624931 VPREB3Q9UKI3 123 aa13.44□□□□□ -0.26
PCF11-207ENST00000624931 ZNF207O43670 478 aaKnown RBP13.43□□□□□ -0.26
PCF11-207ENST00000624931 ZNF502Q8TBZ5 544 aa13.43□□□□□ -0.26
PCF11-207ENST00000624931 MSRB1Q9NZV6 116 aa13.43□□□□□ -0.26
PCF11-207ENST00000624931 TRBV25-1A0A075B6N4 114 aa13.42□□□□□ -0.26
PCF11-207ENST00000624931 K7EMI3 77 aa13.42□□□□□ -0.26
PCF11-207ENST00000624931 BUB3O43684 328 aa13.42□□□□□ -0.26
PCF11-207ENST00000624931 IGHV3-23P01764 117 aa13.42□□□□□ -0.26
PCF11-207ENST00000624931 PLNP26678 52 aa13.42□□□□□ -0.26
PCF11-207ENST00000624931 C19orf54Q5BKX5 351 aa13.42□□□□□ -0.26
PCF11-207ENST00000624931 MRAP2Q96G30 205 aa13.42□□□□□ -0.26
PCF11-207ENST00000624931 ANK3Q12955 4377 aaKnown RBP13.42□□□□□ -0.26
PCF11-207ENST00000624931 A0A087WX48 190 aa13.42□□□□□ -0.26
PCF11-207ENST00000624931 TRAV12-1A0A0B4J245 112 aa13.42□□□□□ -0.26
PCF11-207ENST00000624931 TRAV41A0A0B4J266 112 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms