RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 C9orf153Q5TBE3 101 aa4.46□□□□□ -1.7
ERCC6-213ENST00000624341 RUSC1-AS1Q66K80 236 aa4.46□□□□□ -1.7
ERCC6-213ENST00000624341 NACAE9PAV3 2078 aa4.46□□□□□ -1.7
ERCC6-213ENST00000624341 NOTCH2Q04721 2471 aa4.46□□□□□ -1.7
ERCC6-213ENST00000624341 K7EM74 188 aa4.46□□□□□ -1.7
ERCC6-213ENST00000624341 K7EMI3 77 aa4.46□□□□□ -1.7
ERCC6-213ENST00000624341 OR11H6Q8NGC7 330 aa4.46□□□□□ -1.7
ERCC6-213ENST00000624341 FAM110DQ8TAY7 271 aaPredicted RBP4.46□□□□□ -1.7
ERCC6-213ENST00000624341 PLXNA2O75051 1894 aa4.46□□□□□ -1.7
ERCC6-213ENST00000624341 TRAV12-2A0A075B6T6 113 aa4.46□□□□□ -1.7
ERCC6-213ENST00000624341 FAM223BA6NKX1 122 aa4.46□□□□□ -1.7
ERCC6-213ENST00000624341 FAM223AQ8IWN6 122 aa4.46□□□□□ -1.7
ERCC6-213ENST00000624341 ACACBO00763 2458 aa4.45□□□□□ -1.7
ERCC6-213ENST00000624341 MUC22E2RYF6 1773 aaPredicted RBP4.45□□□□□ -1.7
ERCC6-213ENST00000624341 DNAH12Q6ZR08 3092 aa4.45□□□□□ -1.7
ERCC6-213ENST00000624341 SIVA1O15304 175 aa4.45□□□□□ -1.7
ERCC6-213ENST00000624341 IGLV1-44P01699 117 aa4.45□□□□□ -1.7
ERCC6-213ENST00000624341 RPL35AP18077 110 aaKnown RBP4.45□□□□□ -1.7
ERCC6-213ENST00000624341 PRR30Q53SZ7 412 aaPredicted RBP4.45□□□□□ -1.7
ERCC6-213ENST00000624341 LINC00311Q8N616 119 aa4.45□□□□□ -1.7
ERCC6-213ENST00000624341 TTTY13Q9BZ97 58 aa4.45□□□□□ -1.7
ERCC6-213ENST00000624341 C2CD3Q4AC94 2353 aa4.45□□□□□ -1.7
ERCC6-213ENST00000624341 A0A0C4DFX4 3053 aa4.45□□□□□ -1.7
ERCC6-213ENST00000624341 CSPG4Q6UVK1 2322 aa4.45□□□□□ -1.7
ERCC6-213ENST00000624341 PLXNB1O43157 2135 aa4.45□□□□□ -1.7
ERCC6-213ENST00000624341 TMEM141Q96I45 108 aa4.45□□□□□ -1.7
ERCC6-213ENST00000624341 IGHV3-38A0A0C4DH36 116 aa4.45□□□□□ -1.7
ERCC6-213ENST00000624341 PLA2G2CQ5R387 149 aa4.45□□□□□ -1.7
ERCC6-213ENST00000624341 DTX1Q86Y01 620 aa4.45□□□□□ -1.7
ERCC6-213ENST00000624341 IGFBPL1Q8WX77 278 aa4.45□□□□□ -1.7
ERCC6-213ENST00000624341 NDUFA12Q9UI09 145 aa4.45□□□□□ -1.7
ERCC6-213ENST00000624341 TRBV25-1A0A075B6N4 114 aa4.45□□□□□ -1.7
ERCC6-213ENST00000624341 VWC2LB2RUY7 222 aa4.45□□□□□ -1.7
ERCC6-213ENST00000624341 J3QQQ9 107 aa4.45□□□□□ -1.7
ERCC6-213ENST00000624341 DSCR9P59020 149 aa4.45□□□□□ -1.7
ERCC6-213ENST00000624341 SPRNQ5BIV9 151 aa4.45□□□□□ -1.7
ERCC6-213ENST00000624341 PRR14LQ5THK1 2151 aa4.45□□□□□ -1.7
ERCC6-213ENST00000624341 PRSS29PA6NIE9 313 aa4.44□□□□□ -1.7
ERCC6-213ENST00000624341 PATE2Q6UY27 113 aa4.44□□□□□ -1.7
ERCC6-213ENST00000624341 DYNAPQ8N1N2 210 aa4.44□□□□□ -1.7
ERCC6-213ENST00000624341 NTN5Q8WTR8 489 aaPredicted RBP4.44□□□□□ -1.7
ERCC6-213ENST00000624341 MSRB1Q9NZV6 116 aa4.44□□□□□ -1.7
ERCC6-213ENST00000624341 TAL2Q16559 108 aa4.44□□□□□ -1.7
ERCC6-213ENST00000624341 RNASE13Q5GAN3 156 aaKnown RBP4.44□□□□□ -1.7
ERCC6-213ENST00000624341 XCL2Q9UBD3 114 aa4.44□□□□□ -1.7
ERCC6-213ENST00000624341 I3L3M4 83 aa4.44□□□□□ -1.7
ERCC6-213ENST00000624341 PFN2P35080 140 aa4.44□□□□□ -1.7
ERCC6-213ENST00000624341 AGPAT4-IT1Q9H0P7 198 aa4.44□□□□□ -1.7
ERCC6-213ENST00000624341 B4DSR2 109 aa4.44□□□□□ -1.7
ERCC6-213ENST00000624341 INSP01308 110 aa4.44□□□□□ -1.7
ERCC6-213ENST00000624341 CACNA1AO00555 2505 aa4.44□□□□□ -1.7
ERCC6-213ENST00000624341 GAGE12JA6NER3 117 aa4.44□□□□□ -1.7
ERCC6-213ENST00000624341 F6UB75 175 aa4.44□□□□□ -1.7
ERCC6-213ENST00000624341 DEFB130BP0DP73 79 aa4.44□□□□□ -1.7
ERCC6-213ENST00000624341 DEFB130AP0DP74 79 aa4.44□□□□□ -1.7
ERCC6-213ENST00000624341 IFITM1P13164 125 aa4.44□□□□□ -1.7
ERCC6-213ENST00000624341 UBE2E1P51965 193 aa4.44□□□□□ -1.7
ERCC6-213ENST00000624341 GAGE4Q13068 117 aa4.44□□□□□ -1.7
ERCC6-213ENST00000624341 GAGE5Q13069 117 aa4.44□□□□□ -1.7
ERCC6-213ENST00000624341 FOXE3Q13461 319 aa4.44□□□□□ -1.7
ERCC6-213ENST00000624341 J3QKU1 62 aa4.43□□□□□ -1.7
ERCC6-213ENST00000624341 LINC01545Q5VT33 79 aa4.43□□□□□ -1.7
ERCC6-213ENST00000624341 CFHR4Q92496 578 aa4.43□□□□□ -1.7
ERCC6-213ENST00000624341 C1QTNF4Q9BXJ3 329 aa4.43□□□□□ -1.7
ERCC6-213ENST00000624341 IGHV1OR15-1A0A075B7D0 117 aa4.43□□□□□ -1.7
ERCC6-213ENST00000624341 B5MCH6 92 aa4.43□□□□□ -1.7
ERCC6-213ENST00000624341 TAX1BP3O14907 124 aa4.43□□□□□ -1.7
ERCC6-213ENST00000624341 GNRH2O43555 120 aa4.43□□□□□ -1.7
ERCC6-213ENST00000624341 Q6ZSR3 168 aa4.43□□□□□ -1.7
ERCC6-213ENST00000624341 KLHL30-AS1Q8NEE0 82 aa4.43□□□□□ -1.7
ERCC6-213ENST00000624341 GTSF1Q8WW33 167 aa4.43□□□□□ -1.7
ERCC6-213ENST00000624341 CARD19Q96LW7 228 aa4.43□□□□□ -1.7
ERCC6-213ENST00000624341 RS1O15537 224 aa4.43□□□□□ -1.7
ERCC6-213ENST00000624341 CFHR3Q02985 330 aa4.43□□□□□ -1.7
ERCC6-213ENST00000624341 PTPN13Q12923 2485 aa4.43□□□□□ -1.7
ERCC6-213ENST00000624341 SCRT2Q9NQ03 307 aa4.43□□□□□ -1.7
ERCC6-213ENST00000624341 DSCAML1Q8TD84 2053 aa4.43□□□□□ -1.7
ERCC6-213ENST00000624341 IGKV1OR2-108A0A075B7D4 117 aa4.43□□□□□ -1.7
ERCC6-213ENST00000624341 IGLL5B9A064 214 aa4.43□□□□□ -1.7
ERCC6-213ENST00000624341 INS-IGF2F8WCM5 200 aa4.43□□□□□ -1.7
ERCC6-213ENST00000624341 FXYD2P54710 66 aa4.43□□□□□ -1.7
ERCC6-213ENST00000624341 WFDC2Q14508 124 aa4.43□□□□□ -1.7
ERCC6-213ENST00000624341 FAM167A-AS1Q96KT0 104 aa4.43□□□□□ -1.7
ERCC6-213ENST00000624341 IGF2BP2-AS1Q96M15 143 aa4.43□□□□□ -1.7
ERCC6-213ENST00000624341 CTSZQ9UBR2 303 aa4.43□□□□□ -1.7
ERCC6-213ENST00000624341 FAM215AQ9Y5M1 114 aa4.43□□□□□ -1.7
ERCC6-213ENST00000624341 C22orf46C9J442 243 aa4.42□□□□□ -1.7
ERCC6-213ENST00000624341 C15orf53Q8NAA6 179 aa4.42□□□□□ -1.7
ERCC6-213ENST00000624341 ZNRF2Q8NHG8 242 aa4.42□□□□□ -1.7
ERCC6-213ENST00000624341 RMI2Q96E14 147 aa4.42□□□□□ -1.7
ERCC6-213ENST00000624341 DNAJC30Q96LL9 226 aa4.42□□□□□ -1.7
ERCC6-213ENST00000624341 IGKV1-17P01599 117 aa4.42□□□□□ -1.7
ERCC6-213ENST00000624341 IGLV2-14P01704 120 aa4.42□□□□□ -1.7
ERCC6-213ENST00000624341 INAFM2P0DMQ5 153 aa4.42□□□□□ -1.7
ERCC6-213ENST00000624341 GP9P14770 177 aa4.42□□□□□ -1.7
ERCC6-213ENST00000624341 RITA1Q96K30 269 aa4.42□□□□□ -1.7
ERCC6-213ENST00000624341 C20orf78Q9BR46 151 aa4.42□□□□□ -1.7
ERCC6-213ENST00000624341 PKIGQ9Y2B9 76 aa4.42□□□□□ -1.7
ERCC6-213ENST00000624341 MYO18BQ8IUG5 2567 aa4.42□□□□□ -1.7
ERCC6-213ENST00000624341 SONP18583 2426 aaKnown RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms