RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 RRN3P1Q2M238 152 aa14.31□□□□□ -0.12
PDLIM2-221ENST00000622702 ANXA2RQ3ZCQ2 193 aa14.31□□□□□ -0.12
PDLIM2-221ENST00000622702 KCNS1Q96KK3 526 aa14.31□□□□□ -0.12
PDLIM2-221ENST00000622702 WWC2-AS2Q96NR7 200 aa14.31□□□□□ -0.12
PDLIM2-221ENST00000622702 NAGKQ9UJ70 344 aa14.31□□□□□ -0.12
PDLIM2-221ENST00000622702 IGKV3D-20A0A0C4DH25 116 aa14.31□□□□□ -0.12
PDLIM2-221ENST00000622702 ZNF705GA8MUZ8 300 aaPredicted RBP14.31□□□□□ -0.12
PDLIM2-221ENST00000622702 MIFP14174 115 aa14.31□□□□□ -0.12
PDLIM2-221ENST00000622702 LINC01559Q495D7 138 aa14.31□□□□□ -0.12
PDLIM2-221ENST00000622702 C10orf91Q5T1B1 145 aa14.31□□□□□ -0.12
PDLIM2-221ENST00000622702 DAZAP1Q96EP5 407 aaKnown RBP14.31□□□□□ -0.12
PDLIM2-221ENST00000622702 ORM1P02763 201 aa14.3□□□□□ -0.12
PDLIM2-221ENST00000622702 PNRC1Q12796 327 aaPredicted RBP14.3□□□□□ -0.12
PDLIM2-221ENST00000622702 ADIRFQ15847 76 aa14.3□□□□□ -0.12
PDLIM2-221ENST00000622702 FAM231DQ6ZW35 169 aa14.3□□□□□ -0.12
PDLIM2-221ENST00000622702 ISOC2Q96AB3 205 aa14.3□□□□□ -0.12
PDLIM2-221ENST00000622702 CBY3A6NI87 242 aa14.29□□□□□ -0.12
PDLIM2-221ENST00000622702 KRBOX1C9JBD0 128 aa14.29□□□□□ -0.12
PDLIM2-221ENST00000622702 PRM2P04554 102 aa14.29□□□□□ -0.12
PDLIM2-221ENST00000622702 HTN1P15515 57 aa14.29□□□□□ -0.12
PDLIM2-221ENST00000622702 ZNF493Q6ZR52 646 aa14.29□□□□□ -0.12
PDLIM2-221ENST00000622702 Q8NAQ8 132 aa14.29□□□□□ -0.12
PDLIM2-221ENST00000622702 NUDT10Q8NFP7 164 aa14.29□□□□□ -0.12
PDLIM2-221ENST00000622702 TMEM263Q8WUH6 116 aaKnown RBP14.29□□□□□ -0.12
PDLIM2-221ENST00000622702 NUDT11Q96G61 164 aa14.29□□□□□ -0.12
PDLIM2-221ENST00000622702 M0R036 132 aa14.28□□□□□ -0.12
PDLIM2-221ENST00000622702 P01737 135 aa14.28□□□□□ -0.12
PDLIM2-221ENST00000622702 AZU1P20160 251 aa14.28□□□□□ -0.12
PDLIM2-221ENST00000622702 RNASE8Q8TDE3 154 aaKnown RBP14.28□□□□□ -0.12
PDLIM2-221ENST00000622702 RNASE7Q9H1E1 156 aaKnown RBP14.28□□□□□ -0.12
PDLIM2-221ENST00000622702 CARHSP1Q9Y2V2 147 aaKnown RBP14.28□□□□□ -0.12
PDLIM2-221ENST00000622702 TRGV11A0A075B6L2 103 aa14.27□□□□□ -0.12
PDLIM2-221ENST00000622702 B4DEV8 164 aa14.27□□□□□ -0.12
PDLIM2-221ENST00000622702 TYMSP04818 313 aa14.27□□□□□ -0.12
PDLIM2-221ENST00000622702 IBA57Q5T440 356 aaKnown RBP14.27□□□□□ -0.12
PDLIM2-221ENST00000622702 C16orf74Q96GX8 76 aa14.27□□□□□ -0.12
PDLIM2-221ENST00000622702 OSTCQ9NRP0 149 aa14.27□□□□□ -0.12
PDLIM2-221ENST00000622702 TP53TG3Q9ULZ0 132 aa14.27□□□□□ -0.12
PDLIM2-221ENST00000622702 IGHV4-28A0A0C4DH34 117 aa14.26□□□□□ -0.13
PDLIM2-221ENST00000622702 ERVFC1-1P60608 527 aa14.26□□□□□ -0.13
PDLIM2-221ENST00000622702 ZNF575Q86XF7 245 aa14.26□□□□□ -0.13
PDLIM2-221ENST00000622702 DNAH7Q8WXX0 4024 aa14.26□□□□□ -0.13
PDLIM2-221ENST00000622702 TMEM189A5PLL7 270 aa14.25□□□□□ -0.13
PDLIM2-221ENST00000622702 GNRH2O43555 120 aa14.25□□□□□ -0.13
PDLIM2-221ENST00000622702 CXCL1P09341 107 aa14.25□□□□□ -0.13
PDLIM2-221ENST00000622702 RPL19P84098 196 aaKnown RBP14.25□□□□□ -0.13
PDLIM2-221ENST00000622702 DNLZQ5SXM8 178 aa14.25□□□□□ -0.13
PDLIM2-221ENST00000622702 C11orf72Q8NBR9 251 aa14.25□□□□□ -0.13
PDLIM2-221ENST00000622702 OR2D3Q8NGH3 330 aa14.25□□□□□ -0.13
PDLIM2-221ENST00000622702 SFRP2Q96HF1 295 aa14.25□□□□□ -0.13
PDLIM2-221ENST00000622702 EDA2RQ9HAV5 297 aa14.25□□□□□ -0.13
PDLIM2-221ENST00000622702 IGHV3-16A0A0C4DH30 117 aa14.25□□□□□ -0.13
PDLIM2-221ENST00000622702 PLAC8L1A1L4L8 177 aa14.25□□□□□ -0.13
PDLIM2-221ENST00000622702 RPP21Q9H633 154 aaKnown RBP14.25□□□□□ -0.13
PDLIM2-221ENST00000622702 TMSB15BA0A087X1C1 80 aa14.24□□□□□ -0.13
PDLIM2-221ENST00000622702 RPS20P60866 119 aaKnown RBP14.24□□□□□ -0.13
PDLIM2-221ENST00000622702 ZNF415Q09FC8 603 aa14.24□□□□□ -0.13
PDLIM2-221ENST00000622702 C15orf54Q8N8G6 183 aa14.24□□□□□ -0.13
PDLIM2-221ENST00000622702 C11orf68Q9H3H3 251 aaKnown RBP14.24□□□□□ -0.13
PDLIM2-221ENST00000622702 MDFICQ9P1T7 246 aa14.24□□□□□ -0.13
PDLIM2-221ENST00000622702 GATCO43716 136 aaKnown RBP14.23□□□□□ -0.13
PDLIM2-221ENST00000622702 ASIPP42127 132 aa14.23□□□□□ -0.13
PDLIM2-221ENST00000622702 TCL1AP56279 114 aa14.23□□□□□ -0.13
PDLIM2-221ENST00000622702 CT83Q5H943 113 aa14.23□□□□□ -0.13
PDLIM2-221ENST00000622702 GSN-AS1Q9NRJ2 163 aa14.23□□□□□ -0.13
PDLIM2-221ENST00000622702 XKRY2A2RUG3 117 aa14.22□□□□□ -0.13
PDLIM2-221ENST00000622702 OR10G8Q8NGN5 311 aa14.22□□□□□ -0.13
PDLIM2-221ENST00000622702 IL17DQ8TAD2 202 aa14.22□□□□□ -0.13
PDLIM2-221ENST00000622702 GRIFINA4D1Z8 144 aa14.21□□□□□ -0.13
PDLIM2-221ENST00000622702 RNASE3P12724 160 aaKnown RBP14.21□□□□□ -0.13
PDLIM2-221ENST00000622702 DAZ2Q13117 558 aaKnown RBP14.21□□□□□ -0.13
PDLIM2-221ENST00000622702 IL36BQ9NZH7 164 aa14.21□□□□□ -0.13
PDLIM2-221ENST00000622702 V9GYV3 84 aa14.21□□□□□ -0.13
PDLIM2-221ENST00000622702 SNURFLB1AK76 121 aa14.2□□□□□ -0.14
PDLIM2-221ENST00000622702 DEFB4AO15263 64 aa14.2□□□□□ -0.14
PDLIM2-221ENST00000622702 MED14OSP0DP75 135 aa14.2□□□□□ -0.14
PDLIM2-221ENST00000622702 S100A4P26447 101 aaKnown RBP14.2□□□□□ -0.14
PDLIM2-221ENST00000622702 C9orf85Q96MD7 179 aa14.2□□□□□ -0.14
PDLIM2-221ENST00000622702 TIMM8BQ9Y5J9 83 aaPredicted RBP14.2□□□□□ -0.14
PDLIM2-221ENST00000622702 EMP1P54849 157 aa14.19□□□□□ -0.14
PDLIM2-221ENST00000622702 SPXQ9BT56 116 aa14.19□□□□□ -0.14
PDLIM2-221ENST00000622702 A0A0J9YWU9 116 aa14.18□□□□□ -0.14
PDLIM2-221ENST00000622702 A8MWL6 223 aa14.18□□□□□ -0.14
PDLIM2-221ENST00000622702 PPP1R2P9O14990 202 aa14.18□□□□□ -0.14
PDLIM2-221ENST00000622702 APOC3P02656 99 aa14.18□□□□□ -0.14
PDLIM2-221ENST00000622702 MT-ND4LP03901 98 aa14.18□□□□□ -0.14
PDLIM2-221ENST00000622702 GZMBP10144 247 aa14.18□□□□□ -0.14
PDLIM2-221ENST00000622702 RNF212Q495C1 297 aa14.18□□□□□ -0.14
PDLIM2-221ENST00000622702 SCRT2Q9NQ03 307 aa14.18□□□□□ -0.14
PDLIM2-221ENST00000622702 H3BVH4 76 aa14.18□□□□□ -0.14
PDLIM2-221ENST00000622702 ARMS2P0C7Q2 107 aa14.18□□□□□ -0.14
PDLIM2-221ENST00000622702 IGLC6P0CF74 106 aa14.18□□□□□ -0.14
PDLIM2-221ENST00000622702 MUC7Q8TAX7 377 aa14.18□□□□□ -0.14
PDLIM2-221ENST00000622702 SSBP4Q9BWG4 385 aaPredicted RBP14.18□□□□□ -0.14
PDLIM2-221ENST00000622702 NOP10Q9NPE3 64 aaKnown RBP14.18□□□□□ -0.14
PDLIM2-221ENST00000622702 LYRM9A8MSI8 78 aa14.17□□□□□ -0.14
PDLIM2-221ENST00000622702 OR5AL1P0C617 328 aa14.17□□□□□ -0.14
PDLIM2-221ENST00000622702 SVBPQ8N300 66 aa14.17□□□□□ -0.14
PDLIM2-221ENST00000622702 CLRN3Q8NCR9 226 aa14.17□□□□□ -0.14
PDLIM2-221ENST00000622702 TSKUQ8WUA8 353 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms