RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 LGALS9O00182 355 aa6.18□□□□□ -1.42
VPS11-209ENST00000622309 GP9P14770 177 aa6.18□□□□□ -1.42
VPS11-209ENST00000622309 ZNF134P52741 427 aa6.18□□□□□ -1.42
VPS11-209ENST00000622309 LEAP2Q969E1 77 aa6.18□□□□□ -1.42
VPS11-209ENST00000622309 ZNF256Q9Y2P7 627 aaPredicted RBP6.18□□□□□ -1.42
VPS11-209ENST00000622309 CEP295Q9C0D2 2601 aa6.18□□□□□ -1.42
VPS11-209ENST00000622309 ROS1P08922 2347 aa6.18□□□□□ -1.42
VPS11-209ENST00000622309 INTS1Q8N201 2190 aaKnown RBP6.18□□□□□ -1.42
VPS11-209ENST00000622309 IGHV1-45A0A0A0MS14 117 aa6.18□□□□□ -1.42
VPS11-209ENST00000622309 ZNF503-AS2A6NEH8 195 aa6.18□□□□□ -1.42
VPS11-209ENST00000622309 PRB4P10163 310 aaPredicted RBP6.18□□□□□ -1.42
VPS11-209ENST00000622309 ATXN8Q156A1 80 aa6.18□□□□□ -1.42
VPS11-209ENST00000622309 LINC01620Q4KN68 170 aa6.18□□□□□ -1.42
VPS11-209ENST00000622309 TEX22C9J3V5 150 aa6.17□□□□□ -1.42
VPS11-209ENST00000622309 CDX4O14627 284 aaPredicted RBP6.17□□□□□ -1.42
VPS11-209ENST00000622309 SPRY3O43610 288 aa6.17□□□□□ -1.42
VPS11-209ENST00000622309 COX6A1P12074 109 aa6.17□□□□□ -1.42
VPS11-209ENST00000622309 RPL13AP40429 203 aaKnown RBP6.17□□□□□ -1.42
VPS11-209ENST00000622309 HOXA4Q00056 320 aaPredicted RBP6.17□□□□□ -1.42
VPS11-209ENST00000622309 Q1RN00 199 aa6.17□□□□□ -1.42
VPS11-209ENST00000622309 ZCCHC24Q8N2G6 241 aaKnown RBP6.17□□□□□ -1.42
VPS11-209ENST00000622309 LINC00526Q96FQ7 95 aa6.17□□□□□ -1.42
VPS11-209ENST00000622309 IGKV1D-37A0A075B6S9 117 aa6.17□□□□□ -1.42
VPS11-209ENST00000622309 TRBV6-1A0A0K0K1D8 114 aa6.17□□□□□ -1.42
VPS11-209ENST00000622309 MRPS12O15235 138 aaKnown RBP6.17□□□□□ -1.42
VPS11-209ENST00000622309 IGHV4-39P01824 125 aa6.17□□□□□ -1.42
VPS11-209ENST00000622309 SLC25A16P16260 332 aa6.17□□□□□ -1.42
VPS11-209ENST00000622309 FOLR3P41439 243 aa6.17□□□□□ -1.42
VPS11-209ENST00000622309 CRIP1P50238 77 aa6.17□□□□□ -1.42
VPS11-209ENST00000622309 HERVK_113P61574 105 aa6.17□□□□□ -1.42
VPS11-209ENST00000622309 Q8N8P6 123 aa6.17□□□□□ -1.42
VPS11-209ENST00000622309 TMEM75Q8N9X5 138 aa6.17□□□□□ -1.42
VPS11-209ENST00000622309 PLEKHB2Q96CS7 222 aa6.17□□□□□ -1.42
VPS11-209ENST00000622309 SPANXDQ9BXN6 97 aa6.17□□□□□ -1.42
VPS11-209ENST00000622309 TNCP24821 2201 aa6.17□□□□□ -1.42
VPS11-209ENST00000622309 TRBV7-7A0A0K0K1E9 115 aa6.17□□□□□ -1.42
VPS11-209ENST00000622309 CFC1BP0CG36 223 aa6.17□□□□□ -1.42
VPS11-209ENST00000622309 CFC1P0CG37 223 aa6.17□□□□□ -1.42
VPS11-209ENST00000622309 SAA2P0DJI9 122 aaPredicted RBP6.17□□□□□ -1.42
VPS11-209ENST00000622309 DSPP15924 2871 aaKnown RBP6.17□□□□□ -1.42
VPS11-209ENST00000622309 LAGE3Q14657 143 aa6.17□□□□□ -1.42
VPS11-209ENST00000622309 LINC01561Q8N1V8 128 aa6.17□□□□□ -1.42
VPS11-209ENST00000622309 THAP8Q8NA92 274 aa6.17□□□□□ -1.42
VPS11-209ENST00000622309 LINC01546A6NGU7 62 aa6.16□□□□□ -1.42
VPS11-209ENST00000622309 TNFAIP6P98066 277 aaPredicted RBP6.16□□□□□ -1.42
VPS11-209ENST00000622309 C2orf82Q6UX34 121 aa6.16□□□□□ -1.42
VPS11-209ENST00000622309 FAM90A1Q86YD7 464 aa6.16□□□□□ -1.42
VPS11-209ENST00000622309 SPENQ96T58 3664 aaKnown RBP6.16□□□□□ -1.42
VPS11-209ENST00000622309 PTPRBP23467 1997 aa6.16□□□□□ -1.42
VPS11-209ENST00000622309 SPINK14Q6IE38 97 aa6.16□□□□□ -1.42
VPS11-209ENST00000622309 C1orf229Q6ZS94 237 aaPredicted RBP6.16□□□□□ -1.42
VPS11-209ENST00000622309 LINC00336Q6ZUF6 198 aa6.16□□□□□ -1.42
VPS11-209ENST00000622309 GGNQ86UU5 652 aa6.16□□□□□ -1.42
VPS11-209ENST00000622309 WFDC11Q8NEX6 87 aa6.16□□□□□ -1.42
VPS11-209ENST00000622309 C8orf49Q96NF6 230 aa6.16□□□□□ -1.42
VPS11-209ENST00000622309 ZFYVE26Q68DK2 2539 aa6.16□□□□□ -1.42
VPS11-209ENST00000622309 SH2D1AO60880 128 aa6.15□□□□□ -1.42
VPS11-209ENST00000622309 EFNA4P52798 201 aa6.15□□□□□ -1.42
VPS11-209ENST00000622309 C11orf45Q8TAV5 145 aa6.15□□□□□ -1.42
VPS11-209ENST00000622309 IMMP1LQ96LU5 166 aa6.15□□□□□ -1.42
VPS11-209ENST00000622309 TRBV10-2A0A0K0K1G8 114 aa6.15□□□□□ -1.42
VPS11-209ENST00000622309 NTN3O00634 580 aaPredicted RBP6.15□□□□□ -1.42
VPS11-209ENST00000622309 GAS8-AS1O95177 125 aa6.15□□□□□ -1.42
VPS11-209ENST00000622309 SAA1P0DJI8 122 aaPredicted RBP6.15□□□□□ -1.42
VPS11-209ENST00000622309 GATA1P15976 413 aaPredicted RBP6.15□□□□□ -1.42
VPS11-209ENST00000622309 LYZP61626 148 aa6.15□□□□□ -1.42
VPS11-209ENST00000622309 IGFBPL1Q8WX77 278 aa6.15□□□□□ -1.42
VPS11-209ENST00000622309 LINC00527Q9UJ94 153 aa6.15□□□□□ -1.42
VPS11-209ENST00000622309 K7EM74 188 aa6.15□□□□□ -1.43
VPS11-209ENST00000622309 MALP21145 153 aa6.15□□□□□ -1.43
VPS11-209ENST00000622309 Q0VFX4 171 aa6.15□□□□□ -1.43
VPS11-209ENST00000622309 TMEM86BQ8N661 226 aa6.15□□□□□ -1.43
VPS11-209ENST00000622309 ZNRF2Q8NHG8 242 aa6.15□□□□□ -1.43
VPS11-209ENST00000622309 HES7Q9BYE0 225 aa6.15□□□□□ -1.43
VPS11-209ENST00000622309 IMUPQ9GZP8 106 aa6.15□□□□□ -1.43
VPS11-209ENST00000622309 MRPL36Q9P0J6 103 aaKnown RBP6.15□□□□□ -1.43
VPS11-209ENST00000622309 TNRC6BQ9UPQ9 1833 aaKnown RBP6.14□□□□□ -1.43
VPS11-209ENST00000622309 TRAV12-1A0A0B4J245 112 aa6.14□□□□□ -1.43
VPS11-209ENST00000622309 IGHG3P01860 377 aa6.14□□□□□ -1.43
VPS11-209ENST00000622309 IGKV1-16P04430 117 aa6.14□□□□□ -1.43
VPS11-209ENST00000622309 HOXB4P17483 251 aaPredicted RBP6.14□□□□□ -1.43
VPS11-209ENST00000622309 LOXL3P58215 753 aa6.14□□□□□ -1.43
VPS11-209ENST00000622309 PLGLAQ15195 96 aa6.14□□□□□ -1.43
VPS11-209ENST00000622309 KLHL30-AS1Q8NEE0 82 aa6.14□□□□□ -1.43
VPS11-209ENST00000622309 TMEM190Q8WZ59 177 aa6.14□□□□□ -1.43
VPS11-209ENST00000622309 RNF185Q96GF1 192 aa6.14□□□□□ -1.43
VPS11-209ENST00000622309 KLK15Q9H2R5 256 aa6.14□□□□□ -1.43
VPS11-209ENST00000622309 NDUFA4L2Q9NRX3 87 aa6.14□□□□□ -1.43
VPS11-209ENST00000622309 IGF2RP11717 2491 aa6.14□□□□□ -1.43
VPS11-209ENST00000622309 CADP27708 2225 aa6.14□□□□□ -1.43
VPS11-209ENST00000622309 TRACP01848 142 aa6.14□□□□□ -1.43
VPS11-209ENST00000622309 B3GALT5-AS1P59052 145 aa6.14□□□□□ -1.43
VPS11-209ENST00000622309 TEX36Q5VZQ5 186 aa6.14□□□□□ -1.43
VPS11-209ENST00000622309 CEMP1Q6PRD7 247 aaPredicted RBP6.14□□□□□ -1.43
VPS11-209ENST00000622309 C8orf31Q8N9H6 132 aa6.14□□□□□ -1.43
VPS11-209ENST00000622309 SCGB3A1Q96QR1 104 aa6.14□□□□□ -1.43
VPS11-209ENST00000622309 ZNF71Q9NQZ8 489 aaPredicted RBP6.14□□□□□ -1.43
VPS11-209ENST00000622309 MSRB1Q9NZV6 116 aa6.14□□□□□ -1.43
VPS11-209ENST00000622309 PRO0628Q9UI54 55 aa6.14□□□□□ -1.43
VPS11-209ENST00000622309 PCNX2A6NKB5 2137 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms