RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 SLC25A6P12236 298 aa1.38□□□□□ -2.19
CPNE3-211ENST00000621526 PGAM2P15259 253 aa1.38□□□□□ -2.19
CPNE3-211ENST00000621526 HLA-DMAP28067 261 aa1.38□□□□□ -2.19
CPNE3-211ENST00000621526 SMCO1Q147U7 214 aa1.38□□□□□ -2.19
CPNE3-211ENST00000621526 SURF2Q15527 256 aaPredicted RBP1.38□□□□□ -2.19
CPNE3-211ENST00000621526 TMEM97Q5BJF2 176 aa1.38□□□□□ -2.19
CPNE3-211ENST00000621526 C1orf137Q5JT78 98 aa1.38□□□□□ -2.19
CPNE3-211ENST00000621526 MUC21Q5SSG8 566 aa1.38□□□□□ -2.19
CPNE3-211ENST00000621526 C1orf146Q5VVC0 180 aa1.38□□□□□ -2.19
CPNE3-211ENST00000621526 LINC00305Q7Z4B0 112 aa1.38□□□□□ -2.19
CPNE3-211ENST00000621526 C12orf45Q8N5I9 185 aaPredicted RBP1.38□□□□□ -2.19
CPNE3-211ENST00000621526 C15orf54Q8N8G6 183 aa1.38□□□□□ -2.19
CPNE3-211ENST00000621526 GPX8Q8TED1 209 aa1.38□□□□□ -2.19
CPNE3-211ENST00000621526 TSKUQ8WUA8 353 aa1.38□□□□□ -2.19
CPNE3-211ENST00000621526 TMED6Q8WW62 240 aa1.38□□□□□ -2.19
CPNE3-211ENST00000621526 FAM107BQ9H098 131 aa1.38□□□□□ -2.19
CPNE3-211ENST00000621526 ARL6Q9H0F7 186 aa1.38□□□□□ -2.19
CPNE3-211ENST00000621526 C20orf85Q9H1P6 137 aa1.38□□□□□ -2.19
CPNE3-211ENST00000621526 PPDPFQ9H3Y8 114 aa1.38□□□□□ -2.19
CPNE3-211ENST00000621526 RBKSQ9H477 322 aa1.38□□□□□ -2.19
CPNE3-211ENST00000621526 DUSP21Q9H596 190 aa1.38□□□□□ -2.19
CPNE3-211ENST00000621526 RPP21Q9H633 154 aaKnown RBP1.38□□□□□ -2.19
CPNE3-211ENST00000621526 NDUFB11Q9NX14 153 aa1.38□□□□□ -2.19
CPNE3-211ENST00000621526 SCN3BQ9NY72 215 aa1.38□□□□□ -2.19
CPNE3-211ENST00000621526 TMEM14CQ9P0S9 112 aa1.38□□□□□ -2.19
CPNE3-211ENST00000621526 SHPKQ9UHJ6 478 aa1.38□□□□□ -2.19
CPNE3-211ENST00000621526 KCNIP3Q9Y2W7 256 aa1.38□□□□□ -2.19
CPNE3-211ENST00000621526 TRBV7-3A0A075B6L6 115 aa1.37□□□□□ -2.19
CPNE3-211ENST00000621526 A0A096LNI7 61 aa1.37□□□□□ -2.19
CPNE3-211ENST00000621526 TRAV21A0A0B4J279 112 aa1.37□□□□□ -2.19
CPNE3-211ENST00000621526 A0A1B0GUV1 79 aa1.37□□□□□ -2.19
CPNE3-211ENST00000621526 A0A1B0GVG6 124 aa1.37□□□□□ -2.19
CPNE3-211ENST00000621526 C5orf51A6NDU8 294 aa1.37□□□□□ -2.19
CPNE3-211ENST00000621526 PGPEP1LA6NFU8 196 aa1.37□□□□□ -2.19
CPNE3-211ENST00000621526 M0R3E3 92 aa1.37□□□□□ -2.19
CPNE3-211ENST00000621526 GOSR2O14653 212 aa1.37□□□□□ -2.19
CPNE3-211ENST00000621526 COX7A2P2O60397 106 aa1.37□□□□□ -2.19
CPNE3-211ENST00000621526 EIF3GO75821 320 aaKnown RBP eCLIP1.37□□□□□ -2.19
CPNE3-211ENST00000621526 ATP5HO75947 161 aa1.37□□□□□ -2.19
CPNE3-211ENST00000621526 NDUFB4O95168 129 aa1.37□□□□□ -2.19
CPNE3-211ENST00000621526 TNFRSF6BO95407 300 aa1.37□□□□□ -2.19
CPNE3-211ENST00000621526 CFC1P0CG37 223 aa1.37□□□□□ -2.19
CPNE3-211ENST00000621526 TBPP20226 339 aa1.37□□□□□ -2.19
CPNE3-211ENST00000621526 RAB2AP61019 212 aa1.37□□□□□ -2.19
CPNE3-211ENST00000621526 MXD1Q05195 221 aa1.37□□□□□ -2.19
CPNE3-211ENST00000621526 KRTAP20-1Q3LI63 56 aa1.37□□□□□ -2.19
CPNE3-211ENST00000621526 PRR9Q5T870 116 aa1.37□□□□□ -2.19
CPNE3-211ENST00000621526 TMEM268Q5VZI3 342 aa1.37□□□□□ -2.19
CPNE3-211ENST00000621526 UFSP1Q6NVU6 142 aa1.37□□□□□ -2.19
CPNE3-211ENST00000621526 Q6ZRG5 221 aa1.37□□□□□ -2.19
CPNE3-211ENST00000621526 LINC00173Q6ZV60 143 aa1.37□□□□□ -2.19
CPNE3-211ENST00000621526 FP248Q71RG6 208 aaPredicted RBP1.37□□□□□ -2.19
CPNE3-211ENST00000621526 KRTAP19-1Q8IUB9 90 aa1.37□□□□□ -2.19
CPNE3-211ENST00000621526 CROCCP3Q8IVE0 287 aa1.37□□□□□ -2.19
CPNE3-211ENST00000621526 C8orf59Q8N0T1 100 aaPredicted RBP1.37□□□□□ -2.19
CPNE3-211ENST00000621526 LINC00269Q8N2A0 174 aa1.37□□□□□ -2.19
CPNE3-211ENST00000621526 PACRGLQ8N7B6 248 aa1.37□□□□□ -2.19
CPNE3-211ENST00000621526 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.37□□□□□ -2.19
CPNE3-211ENST00000621526 OR10G8Q8NGN5 311 aa1.37□□□□□ -2.19
CPNE3-211ENST00000621526 OR5H6Q8NGV6 325 aa1.37□□□□□ -2.19
CPNE3-211ENST00000621526 OR2T35Q8NGX2 323 aa1.37□□□□□ -2.19
CPNE3-211ENST00000621526 OR2G3Q8NGZ4 309 aa1.37□□□□□ -2.19
CPNE3-211ENST00000621526 PYDC1Q8WXC3 89 aa1.37□□□□□ -2.19
CPNE3-211ENST00000621526 C9orf85Q96MD7 179 aa1.37□□□□□ -2.19
CPNE3-211ENST00000621526 RTBDNQ9BSG5 229 aaPredicted RBP1.37□□□□□ -2.19
CPNE3-211ENST00000621526 SSBP4Q9BWG4 385 aaPredicted RBP1.37□□□□□ -2.19
CPNE3-211ENST00000621526 AAMDCQ9H7C9 122 aa1.37□□□□□ -2.19
CPNE3-211ENST00000621526 Q9UF83 564 aa1.37□□□□□ -2.19
CPNE3-211ENST00000621526 TPRKBQ9Y3C4 175 aa1.37□□□□□ -2.19
CPNE3-211ENST00000621526 TIMM9Q9Y5J7 89 aa1.37□□□□□ -2.19
CPNE3-211ENST00000621526 A0A087WWL8 130 aa1.36□□□□□ -2.19
CPNE3-211ENST00000621526 IGHV3-73A0A0B4J1V6 119 aa1.36□□□□□ -2.19
CPNE3-211ENST00000621526 SMIM31A0A1B0GVY4 71 aa1.36□□□□□ -2.19
CPNE3-211ENST00000621526 A0A1W2PNN7 141 aa1.36□□□□□ -2.19
CPNE3-211ENST00000621526 KRTAP4-16G5E9R7 235 aaPredicted RBP1.36□□□□□ -2.19
CPNE3-211ENST00000621526 H3BTX0 84 aa1.36□□□□□ -2.19
CPNE3-211ENST00000621526 M0R2T5 61 aa1.36□□□□□ -2.19
CPNE3-211ENST00000621526 RHODO00212 210 aa1.36□□□□□ -2.19
CPNE3-211ENST00000621526 SYNGR2O43760 224 aa1.36□□□□□ -2.19
CPNE3-211ENST00000621526 TSHBP01222 138 aa1.36□□□□□ -2.19
CPNE3-211ENST00000621526 TYMSP04818 313 aa1.36□□□□□ -2.19
CPNE3-211ENST00000621526 SNRPCP09234 159 aaKnown RBP1.36□□□□□ -2.19
CPNE3-211ENST00000621526 FGF6P10767 208 aa1.36□□□□□ -2.19
CPNE3-211ENST00000621526 CSN1S1P47710 185 aa1.36□□□□□ -2.19
CPNE3-211ENST00000621526 AMTP48728 403 aa1.36□□□□□ -2.19
CPNE3-211ENST00000621526 PTTG1IPP53801 180 aa1.36□□□□□ -2.19
CPNE3-211ENST00000621526 UBE2D3P61077 147 aa1.36□□□□□ -2.19
CPNE3-211ENST00000621526 UBE2D2P62837 147 aa1.36□□□□□ -2.19
CPNE3-211ENST00000621526 RBX1P62877 108 aa1.36□□□□□ -2.19
CPNE3-211ENST00000621526 EIF5AP63241 154 aaKnown RBP1.36□□□□□ -2.19
CPNE3-211ENST00000621526 RPL36AP83881 106 aaKnown RBP1.36□□□□□ -2.19
CPNE3-211ENST00000621526 AKR1C1Q04828 323 aa1.36□□□□□ -2.19
CPNE3-211ENST00000621526 REG3AQ06141 175 aa1.36□□□□□ -2.19
CPNE3-211ENST00000621526 ZNF674Q2M3X9 581 aa1.36□□□□□ -2.19
CPNE3-211ENST00000621526 MPV17L2Q567V2 206 aa1.36□□□□□ -2.19
CPNE3-211ENST00000621526 C10orf113Q5VZT2 155 aa1.36□□□□□ -2.19
CPNE3-211ENST00000621526 C22orf42Q6IC83 251 aa1.36□□□□□ -2.19
CPNE3-211ENST00000621526 OR1L4Q8NGR5 311 aa1.36□□□□□ -2.19
CPNE3-211ENST00000621526 TYMSOSQ8TAI1 123 aa1.36□□□□□ -2.19
CPNE3-211ENST00000621526 DYNC2LI1Q8TCX1 351 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms