RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 TMEM14CQ9P0S9 112 aa7.71□□□□□ -1.17
CLTCL1-211ENST00000621271 C2orf66Q6UXQ4 117 aa7.71□□□□□ -1.18
CLTCL1-211ENST00000621271 ZNF493Q6ZR52 646 aa7.71□□□□□ -1.18
CLTCL1-211ENST00000621271 ZNF492Q9P255 531 aa7.71□□□□□ -1.18
CLTCL1-211ENST00000621271 PRSS46E5RG02 174 aa7.71□□□□□ -1.18
CLTCL1-211ENST00000621271 CDPF1Q6NVV7 123 aa7.71□□□□□ -1.18
CLTCL1-211ENST00000621271 C16orf74Q96GX8 76 aa7.71□□□□□ -1.18
CLTCL1-211ENST00000621271 PLCE1Q9P212 2302 aa7.7□□□□□ -1.18
CLTCL1-211ENST00000621271 PLXNA4Q9HCM2 1894 aa7.7□□□□□ -1.18
CLTCL1-211ENST00000621271 INSL3P51460 131 aa7.7□□□□□ -1.18
CLTCL1-211ENST00000621271 TMEM213A2RRL7 107 aa7.7□□□□□ -1.18
CLTCL1-211ENST00000621271 LOXL1Q08397 574 aaPredicted RBP7.7□□□□□ -1.18
CLTCL1-211ENST00000621271 TAL2Q16559 108 aa7.7□□□□□ -1.18
CLTCL1-211ENST00000621271 ZC2HC1BQ5TFG8 222 aa7.7□□□□□ -1.18
CLTCL1-211ENST00000621271 Q6ZQT7 251 aa7.7□□□□□ -1.18
CLTCL1-211ENST00000621271 CSPG4Q6UVK1 2322 aa7.7□□□□□ -1.18
CLTCL1-211ENST00000621271 FBXL19-AS1Q494R0 122 aa7.7□□□□□ -1.18
CLTCL1-211ENST00000621271 GTSF1LQ9H1H1 148 aa7.7□□□□□ -1.18
CLTCL1-211ENST00000621271 AJUBAQ96IF1 538 aa7.69□□□□□ -1.18
CLTCL1-211ENST00000621271 CYYR1Q96J86 154 aa7.69□□□□□ -1.18
CLTCL1-211ENST00000621271 TRAV8-4A0A0B4J246 113 aa7.69□□□□□ -1.18
CLTCL1-211ENST00000621271 F6UB75 175 aa7.69□□□□□ -1.18
CLTCL1-211ENST00000621271 COA6Q5JTJ3 125 aaKnown RBP7.69□□□□□ -1.18
CLTCL1-211ENST00000621271 NEGR1Q7Z3B1 354 aa7.69□□□□□ -1.18
CLTCL1-211ENST00000621271 ZNF524Q96C55 264 aa7.69□□□□□ -1.18
CLTCL1-211ENST00000621271 RNF152Q8N8N0 203 aa7.69□□□□□ -1.18
CLTCL1-211ENST00000621271 V9GYV3 84 aa7.69□□□□□ -1.18
CLTCL1-211ENST00000621271 MYO18BQ8IUG5 2567 aa7.69□□□□□ -1.18
CLTCL1-211ENST00000621271 FAM231BA6NCW3 169 aa7.69□□□□□ -1.18
CLTCL1-211ENST00000621271 CRLF1O75462 422 aa7.69□□□□□ -1.18
CLTCL1-211ENST00000621271 ZNF48Q96MX3 618 aaPredicted RBP7.69□□□□□ -1.18
CLTCL1-211ENST00000621271 CITED2Q99967 270 aaPredicted RBP7.68□□□□□ -1.18
CLTCL1-211ENST00000621271 TM2D2Q9BX73 214 aa7.68□□□□□ -1.18
CLTCL1-211ENST00000621271 IGHV7-81A0A0B4J1V7 117 aa7.68□□□□□ -1.18
CLTCL1-211ENST00000621271 GYPEP15421 78 aa7.68□□□□□ -1.18
CLTCL1-211ENST00000621271 XCL1P47992 114 aa7.68□□□□□ -1.18
CLTCL1-211ENST00000621271 RSPO1Q2MKA7 263 aaPredicted RBP7.68□□□□□ -1.18
CLTCL1-211ENST00000621271 ZNF491Q8N8L2 437 aa7.68□□□□□ -1.18
CLTCL1-211ENST00000621271 HEATR5AQ86XA9 2040 aa7.68□□□□□ -1.18
CLTCL1-211ENST00000621271 HIST1H4AP62805 103 aaKnown RBP7.68□□□□□ -1.18
CLTCL1-211ENST00000621271 ZNF843Q8N446 348 aa7.68□□□□□ -1.18
CLTCL1-211ENST00000621271 Q8NA96 180 aa7.68□□□□□ -1.18
CLTCL1-211ENST00000621271 DOCK9Q9BZ29 2069 aa7.68□□□□□ -1.18
CLTCL1-211ENST00000621271 A0A1W2PNU3 283 aaPredicted RBP7.68□□□□□ -1.18
CLTCL1-211ENST00000621271 DNAJC9-AS1A6NH13 148 aa7.68□□□□□ -1.18
CLTCL1-211ENST00000621271 INAFM1C9JVW0 142 aa7.68□□□□□ -1.18
CLTCL1-211ENST00000621271 DEFB135Q30KP9 77 aa7.68□□□□□ -1.18
CLTCL1-211ENST00000621271 CT83Q5H943 113 aa7.68□□□□□ -1.18
CLTCL1-211ENST00000621271 ZFAND6Q6FIF0 208 aa7.68□□□□□ -1.18
CLTCL1-211ENST00000621271 IGHV4OR15-8A0A075B7B6 117 aa7.67□□□□□ -1.18
CLTCL1-211ENST00000621271 A0A087WW49 117 aa7.67□□□□□ -1.18
CLTCL1-211ENST00000621271 KIR2DL5BA0A0G2JN68 375 aa7.67□□□□□ -1.18
CLTCL1-211ENST00000621271 KIR2DL5BA0A0G2JPC4 375 aa7.67□□□□□ -1.18
CLTCL1-211ENST00000621271 SUMO4Q6EEV6 95 aa7.67□□□□□ -1.18
CLTCL1-211ENST00000621271 KIR2DL5AQ8N109 375 aa7.67□□□□□ -1.18
CLTCL1-211ENST00000621271 IGLL1P15814 213 aa7.67□□□□□ -1.18
CLTCL1-211ENST00000621271 GAGE2BQ13066 116 aa7.67□□□□□ -1.18
CLTCL1-211ENST00000621271 GAGE2EQ4V326 116 aa7.67□□□□□ -1.18
CLTCL1-211ENST00000621271 FAM104BQ5XKR9 115 aa7.67□□□□□ -1.18
CLTCL1-211ENST00000621271 NPBQ8NG41 125 aa7.67□□□□□ -1.18
CLTCL1-211ENST00000621271 GAGE2DQ9UEU5 116 aa7.67□□□□□ -1.18
CLTCL1-211ENST00000621271 HERVK_113P63121 156 aa7.67□□□□□ -1.18
CLTCL1-211ENST00000621271 POU2AF1Q16633 256 aa7.67□□□□□ -1.18
CLTCL1-211ENST00000621271 SMIM2Q9BVW6 85 aa7.67□□□□□ -1.18
CLTCL1-211ENST00000621271 NCOR2Q9Y618 2525 aa7.67□□□□□ -1.18
CLTCL1-211ENST00000621271 TRAV25A0A0B4J276 109 aa7.67□□□□□ -1.18
CLTCL1-211ENST00000621271 Q8N8P6 123 aa7.67□□□□□ -1.18
CLTCL1-211ENST00000621271 DOCK11Q5JSL3 2073 aa7.67□□□□□ -1.18
CLTCL1-211ENST00000621271 TRAV8-3A0A0A6YYJ7 113 aa7.66□□□□□ -1.18
CLTCL1-211ENST00000621271 IGLL5B9A064 214 aa7.66□□□□□ -1.18
CLTCL1-211ENST00000621271 IGLV3-1P01715 115 aa7.66□□□□□ -1.18
CLTCL1-211ENST00000621271 RPL18AQ02543 176 aaKnown RBP7.66□□□□□ -1.18
CLTCL1-211ENST00000621271 SHISA2Q6UWI4 295 aa7.66□□□□□ -1.18
CLTCL1-211ENST00000621271 ADAMTSL5Q6ZMM2 481 aa7.66□□□□□ -1.18
CLTCL1-211ENST00000621271 FAM231DQ6ZW35 169 aa7.66□□□□□ -1.18
CLTCL1-211ENST00000621271 STPG4Q8N801 248 aa7.66□□□□□ -1.18
CLTCL1-211ENST00000621271 WFDC11Q8NEX6 87 aa7.66□□□□□ -1.18
CLTCL1-211ENST00000621271 ATP6V0E2Q8NHE4 81 aa7.66□□□□□ -1.18
CLTCL1-211ENST00000621271 IGFBPL1Q8WX77 278 aa7.66□□□□□ -1.18
CLTCL1-211ENST00000621271 ZNF503Q96F45 646 aa7.66□□□□□ -1.18
CLTCL1-211ENST00000621271 SMIM27A0A1W2PRY6 76 aa7.66□□□□□ -1.18
CLTCL1-211ENST00000621271 IGHV3-30P01768 117 aa7.66□□□□□ -1.18
CLTCL1-211ENST00000621271 IGHV3-33P01772 117 aa7.66□□□□□ -1.18
CLTCL1-211ENST00000621271 IGHV3-30-3P0DP02 117 aa7.66□□□□□ -1.18
CLTCL1-211ENST00000621271 IGHV3-30-5P0DP03 117 aa7.66□□□□□ -1.18
CLTCL1-211ENST00000621271 C11orf53Q8IXP5 236 aa7.66□□□□□ -1.18
CLTCL1-211ENST00000621271 SCRT2Q9NQ03 307 aa7.66□□□□□ -1.18
CLTCL1-211ENST00000621271 IGLC7A0M8Q6 106 aa7.66□□□□□ -1.18
CLTCL1-211ENST00000621271 RBMY1FQ15415 496 aaKnown RBP7.66□□□□□ -1.18
CLTCL1-211ENST00000621271 C2orf82Q6UX34 121 aa7.66□□□□□ -1.18
CLTCL1-211ENST00000621271 C5orf56Q8N8D9 126 aa7.66□□□□□ -1.18
CLTCL1-211ENST00000621271 C4orf3Q8WVX3 66 aa7.66□□□□□ -1.18
CLTCL1-211ENST00000621271 C11orf52Q96A22 123 aa7.66□□□□□ -1.18
CLTCL1-211ENST00000621271 SPRY4Q9C004 299 aa7.66□□□□□ -1.18
CLTCL1-211ENST00000621271 ALPK3Q96L96 1907 aa7.66□□□□□ -1.18
CLTCL1-211ENST00000621271 TRAV26-2A0A0B4J265 109 aa7.66□□□□□ -1.18
CLTCL1-211ENST00000621271 BUB3O43684 328 aa7.66□□□□□ -1.18
CLTCL1-211ENST00000621271 ESM1Q9NQ30 184 aa7.66□□□□□ -1.18
CLTCL1-211ENST00000621271 C9orf118A6NHY6 69 aa7.65□□□□□ -1.18
CLTCL1-211ENST00000621271 TIRAPP58753 221 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms