RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 MBD3L4A6NDZ8 208 aaPredicted RBP7.85□□□□□ -1.15
COL4A6-210ENST00000621266 MBD3L3A6NE82 208 aaPredicted RBP7.85□□□□□ -1.15
COL4A6-210ENST00000621266 MBD3L5A6NJ08 208 aaPredicted RBP7.85□□□□□ -1.15
COL4A6-210ENST00000621266 GATA1P15976 413 aaPredicted RBP7.85□□□□□ -1.15
COL4A6-210ENST00000621266 WDR81Q562E7 1941 aa7.85□□□□□ -1.15
COL4A6-210ENST00000621266 ZFP2Q6ZN57 461 aa7.85□□□□□ -1.15
COL4A6-210ENST00000621266 WDR86Q86TI4 376 aa7.85□□□□□ -1.15
COL4A6-210ENST00000621266 MBD3L2Q8NHZ7 208 aaPredicted RBP7.85□□□□□ -1.15
COL4A6-210ENST00000621266 A4D1N5 150 aa7.85□□□□□ -1.15
COL4A6-210ENST00000621266 USMG5Q96IX5 58 aa7.85□□□□□ -1.15
COL4A6-210ENST00000621266 TMEM14BQ9NUH8 114 aa7.85□□□□□ -1.15
COL4A6-210ENST00000621266 FREM3P0C091 2139 aa7.85□□□□□ -1.15
COL4A6-210ENST00000621266 CLEC2BQ92478 149 aa7.85□□□□□ -1.15
COL4A6-210ENST00000621266 ARTNQ5T4W7 220 aa7.85□□□□□ -1.15
COL4A6-210ENST00000621266 KIF26AQ9ULI4 1882 aaPredicted RBP7.85□□□□□ -1.15
COL4A6-210ENST00000621266 SPRY2O43597 315 aa7.84□□□□□ -1.15
COL4A6-210ENST00000621266 XCL1P47992 114 aa7.84□□□□□ -1.15
COL4A6-210ENST00000621266 NDUFB8O95169 186 aa7.84□□□□□ -1.15
COL4A6-210ENST00000621266 B3GALT5-AS1P59052 145 aa7.84□□□□□ -1.15
COL4A6-210ENST00000621266 Q6ZS49 121 aa7.84□□□□□ -1.15
COL4A6-210ENST00000621266 PYGO2Q9BRQ0 406 aa7.84□□□□□ -1.15
COL4A6-210ENST00000621266 TTTY13Q9BZ97 58 aa7.84□□□□□ -1.15
COL4A6-210ENST00000621266 MINOS1Q5TGZ0 78 aa7.84□□□□□ -1.15
COL4A6-210ENST00000621266 MINOS1-NBL1R4GNA1 71 aa7.84□□□□□ -1.15
COL4A6-210ENST00000621266 CFPP27918 469 aa7.84□□□□□ -1.15
COL4A6-210ENST00000621266 DAND5Q8N907 189 aa7.83□□□□□ -1.16
COL4A6-210ENST00000621266 CHD3Q12873 2000 aaKnown RBP7.83□□□□□ -1.16
COL4A6-210ENST00000621266 TMEM61Q8N0U2 210 aa7.83□□□□□ -1.16
COL4A6-210ENST00000621266 FXYD5Q96DB9 178 aa7.83□□□□□ -1.16
COL4A6-210ENST00000621266 C20orf78Q9BR46 151 aa7.83□□□□□ -1.16
COL4A6-210ENST00000621266 RBAKDNA6NC62 111 aa7.83□□□□□ -1.16
COL4A6-210ENST00000621266 FUSP35637 526 aaKnown RBP eCLIP7.83□□□□□ -1.16
COL4A6-210ENST00000621266 NDUFA4L2Q9NRX3 87 aa7.83□□□□□ -1.16
COL4A6-210ENST00000621266 VSIG2Q96IQ7 327 aa7.83□□□□□ -1.16
COL4A6-210ENST00000621266 AKAP6Q13023 2319 aa7.83□□□□□ -1.16
COL4A6-210ENST00000621266 TRAV4A0A0B4J268 109 aa7.83□□□□□ -1.16
COL4A6-210ENST00000621266 H3BRN7 92 aa7.83□□□□□ -1.16
COL4A6-210ENST00000621266 MT-ATP8P03928 68 aa7.83□□□□□ -1.16
COL4A6-210ENST00000621266 ANGP03950 147 aaKnown RBP7.83□□□□□ -1.16
COL4A6-210ENST00000621266 NREPQ16612 68 aa7.83□□□□□ -1.16
COL4A6-210ENST00000621266 LYPD6Q86Y78 171 aa7.83□□□□□ -1.16
COL4A6-210ENST00000621266 MLST8Q9BVC4 326 aa7.83□□□□□ -1.16
COL4A6-210ENST00000621266 LTAP01374 205 aa7.82□□□□□ -1.16
COL4A6-210ENST00000621266 NDUFV3P56181 108 aaKnown RBP7.82□□□□□ -1.16
COL4A6-210ENST00000621266 LYPD6BQ8NI32 183 aa7.82□□□□□ -1.16
COL4A6-210ENST00000621266 TRAV23DV6A0A075B6W5 121 aa7.82□□□□□ -1.16
COL4A6-210ENST00000621266 FOXE3Q13461 319 aa7.82□□□□□ -1.16
COL4A6-210ENST00000621266 C17orf77Q96MU5 243 aa7.82□□□□□ -1.16
COL4A6-210ENST00000621266 ATP6V0E1O15342 81 aa7.82□□□□□ -1.16
COL4A6-210ENST00000621266 UBE2BP63146 152 aa7.82□□□□□ -1.16
COL4A6-210ENST00000621266 PI4KAP42356 2102 aa7.82□□□□□ -1.16
COL4A6-210ENST00000621266 GNRH2O43555 120 aa7.82□□□□□ -1.16
COL4A6-210ENST00000621266 SPTBN1Q01082 2364 aaKnown RBP7.82□□□□□ -1.16
COL4A6-210ENST00000621266 CGB3P0DN86 165 aa7.82□□□□□ -1.16
COL4A6-210ENST00000621266 NRGNQ92686 78 aa7.82□□□□□ -1.16
COL4A6-210ENST00000621266 E7EQL1 145 aa7.81□□□□□ -1.16
COL4A6-210ENST00000621266 LGALS9O00182 355 aa7.81□□□□□ -1.16
COL4A6-210ENST00000621266 PROP1O75360 226 aa7.81□□□□□ -1.16
COL4A6-210ENST00000621266 VOPP1Q96AW1 172 aa7.81□□□□□ -1.16
COL4A6-210ENST00000621266 Q6ZUT4 128 aa7.81□□□□□ -1.16
COL4A6-210ENST00000621266 SLC25A29Q8N8R3 303 aa7.81□□□□□ -1.16
COL4A6-210ENST00000621266 ADAMTS9Q9P2N4 1935 aa7.81□□□□□ -1.16
COL4A6-210ENST00000621266 MED12Q93074 2177 aa7.81□□□□□ -1.16
COL4A6-210ENST00000621266 TRBV10-2A0A0K0K1G8 114 aa7.81□□□□□ -1.16
COL4A6-210ENST00000621266 RPL39LQ96EH5 51 aaKnown RBP7.81□□□□□ -1.16
COL4A6-210ENST00000621266 K7EM74 188 aa7.81□□□□□ -1.16
COL4A6-210ENST00000621266 LINC01545Q5VT33 79 aa7.81□□□□□ -1.16
COL4A6-210ENST00000621266 C11orf52Q96A22 123 aa7.8□□□□□ -1.16
COL4A6-210ENST00000621266 COL6A6A6NMZ7 2263 aa7.8□□□□□ -1.16
COL4A6-210ENST00000621266 ZNF134P52741 427 aa7.8□□□□□ -1.16
COL4A6-210ENST00000621266 OOSP1A8MZH6 123 aa7.8□□□□□ -1.16
COL4A6-210ENST00000621266 LHBP01229 141 aa7.8□□□□□ -1.16
COL4A6-210ENST00000621266 SND1-IT1Q9HBX3 110 aa7.8□□□□□ -1.16
COL4A6-210ENST00000621266 TMEM14CQ9P0S9 112 aa7.8□□□□□ -1.16
COL4A6-210ENST00000621266 PIP4P1Q86T03 277 aa7.8□□□□□ -1.16
COL4A6-210ENST00000621266 LY6G6EA0A0G2JKS1 128 aa7.8□□□□□ -1.16
COL4A6-210ENST00000621266 CGB7P0DN87 165 aa7.8□□□□□ -1.16
COL4A6-210ENST00000621266 FOXL2NBQ6ZUU3 175 aa7.8□□□□□ -1.16
COL4A6-210ENST00000621266 IGF2BP2-AS1Q96M15 143 aa7.8□□□□□ -1.16
COL4A6-210ENST00000621266 U3KQA8 63 aa7.8□□□□□ -1.16
COL4A6-210ENST00000621266 G3V318 75 aa7.79□□□□□ -1.16
COL4A6-210ENST00000621266 WFDC11Q8NEX6 87 aa7.79□□□□□ -1.16
COL4A6-210ENST00000621266 NCR3O14931 201 aa7.79□□□□□ -1.16
COL4A6-210ENST00000621266 TRBV12-3P01733 135 aa7.79□□□□□ -1.16
COL4A6-210ENST00000621266 SAA4P35542 130 aa7.79□□□□□ -1.16
COL4A6-210ENST00000621266 C5orf38Q86SI9 138 aa7.79□□□□□ -1.16
COL4A6-210ENST00000621266 TPSG1Q9NRR2 321 aa7.79□□□□□ -1.16
COL4A6-210ENST00000621266 FAM240AA0A1B0GVK7 77 aa7.79□□□□□ -1.16
COL4A6-210ENST00000621266 Q6ZQT7 251 aa7.79□□□□□ -1.16
COL4A6-210ENST00000621266 YLPM1P49750 1951 aaKnown RBP7.79□□□□□ -1.16
COL4A6-210ENST00000621266 RNF152Q8N8N0 203 aa7.79□□□□□ -1.16
COL4A6-210ENST00000621266 FAM236DA0A1B0GTK5 79 aa7.78□□□□□ -1.16
COL4A6-210ENST00000621266 FAM236CP0DP71 79 aa7.78□□□□□ -1.16
COL4A6-210ENST00000621266 ATP6V0E2Q8NHE4 81 aa7.78□□□□□ -1.16
COL4A6-210ENST00000621266 RNF114Q9Y508 228 aa7.78□□□□□ -1.16
COL4A6-210ENST00000621266 CACNA1BQ00975 2339 aa7.78□□□□□ -1.16
COL4A6-210ENST00000621266 MSMBP08118 114 aa7.78□□□□□ -1.16
COL4A6-210ENST00000621266 CACNA1HO95180 2353 aa7.78□□□□□ -1.16
COL4A6-210ENST00000621266 COA6Q5JTJ3 125 aaKnown RBP7.78□□□□□ -1.16
COL4A6-210ENST00000621266 C20orf197Q8N268 126 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms