RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 PRO0255Q9UI72 69 aa7.77□□□□□ -1.17
CPNE3-210ENST00000621245 RPH3ALQ9UNE2 315 aa7.77□□□□□ -1.17
CPNE3-210ENST00000621245 HHLA3Q9XRX5 114 aa7.77□□□□□ -1.17
CPNE3-210ENST00000621245 HSPB11Q9Y547 144 aa7.77□□□□□ -1.17
CPNE3-210ENST00000621245 TRAV8-1A0A0A6YYK1 113 aa7.76□□□□□ -1.17
CPNE3-210ENST00000621245 F6UZH7 168 aa7.76□□□□□ -1.17
CPNE3-210ENST00000621245 INMT-MINDY4F8WBC2 141 aa7.76□□□□□ -1.17
CPNE3-210ENST00000621245 K7EQD1 137 aa7.76□□□□□ -1.17
CPNE3-210ENST00000621245 MPC2O95563 127 aa7.76□□□□□ -1.17
CPNE3-210ENST00000621245 Q6AWC8 147 aa7.76□□□□□ -1.17
CPNE3-210ENST00000621245 HYLS1Q96M11 299 aa7.76□□□□□ -1.17
CPNE3-210ENST00000621245 NAGKQ9UJ70 344 aa7.76□□□□□ -1.17
CPNE3-210ENST00000621245 HMGB3O15347 200 aaKnown RBP7.75□□□□□ -1.17
CPNE3-210ENST00000621245 GNRH2O43555 120 aa7.75□□□□□ -1.17
CPNE3-210ENST00000621245 RAB2AP61019 212 aa7.75□□□□□ -1.17
CPNE3-210ENST00000621245 GNG5P63218 68 aa7.75□□□□□ -1.17
CPNE3-210ENST00000621245 LINC00299Q6ZSB3 139 aa7.75□□□□□ -1.17
CPNE3-210ENST00000621245 S100ZQ8WXG8 99 aa7.75□□□□□ -1.17
CPNE3-210ENST00000621245 MARVELD1Q9BSK0 173 aa7.75□□□□□ -1.17
CPNE3-210ENST00000621245 MBD2Q9UBB5 411 aa7.75□□□□□ -1.17
CPNE3-210ENST00000621245 LRP1Q07954 4544 aaKnown RBP7.75□□□□□ -1.17
CPNE3-210ENST00000621245 RBAKDNA6NC62 111 aa7.74□□□□□ -1.17
CPNE3-210ENST00000621245 XGP55808 180 aa7.74□□□□□ -1.17
CPNE3-210ENST00000621245 KRTAP10-1P60331 282 aa7.74□□□□□ -1.17
CPNE3-210ENST00000621245 KHDC3LQ587J8 217 aa7.74□□□□□ -1.17
CPNE3-210ENST00000621245 OR10G4Q8NGN3 311 aa7.74□□□□□ -1.17
CPNE3-210ENST00000621245 SGK494Q96LW2 274 aa7.74□□□□□ -1.17
CPNE3-210ENST00000621245 KCNIP2Q9NS61 270 aa7.74□□□□□ -1.17
CPNE3-210ENST00000621245 TRGV4A0A0C4DH28 118 aa7.73□□□□□ -1.17
CPNE3-210ENST00000621245 IGHV3-16A0A0C4DH30 117 aa7.73□□□□□ -1.17
CPNE3-210ENST00000621245 TRBV7-9A0A0J9YWB2 115 aa7.73□□□□□ -1.17
CPNE3-210ENST00000621245 C17orf112F2Z3M2 114 aa7.73□□□□□ -1.17
CPNE3-210ENST00000621245 TYMSP04818 313 aa7.73□□□□□ -1.17
CPNE3-210ENST00000621245 RPL12P30050 165 aaKnown RBP7.73□□□□□ -1.17
CPNE3-210ENST00000621245 CSN1S1P47710 185 aa7.73□□□□□ -1.17
CPNE3-210ENST00000621245 HAMPP81172 84 aa7.73□□□□□ -1.17
CPNE3-210ENST00000621245 GOLT1AQ6ZVE7 132 aa7.73□□□□□ -1.17
CPNE3-210ENST00000621245 RASL10AQ92737 203 aa7.73□□□□□ -1.17
CPNE3-210ENST00000621245 C11orf21Q9P2W6 132 aa7.73□□□□□ -1.17
CPNE3-210ENST00000621245 A0A087WTM6 91 aa7.72□□□□□ -1.17
CPNE3-210ENST00000621245 PGPA6NDG6 321 aa7.72□□□□□ -1.17
CPNE3-210ENST00000621245 SSNA1O43805 119 aa7.72□□□□□ -1.17
CPNE3-210ENST00000621245 ZNF80P51504 273 aaPredicted RBP7.72□□□□□ -1.17
CPNE3-210ENST00000621245 MRPL23Q16540 153 aaKnown RBP7.72□□□□□ -1.17
CPNE3-210ENST00000621245 NEGR1Q7Z3B1 354 aa7.72□□□□□ -1.17
CPNE3-210ENST00000621245 LYPD1Q8N2G4 141 aa7.72□□□□□ -1.17
CPNE3-210ENST00000621245 OTORQ9NRC9 128 aa7.72□□□□□ -1.17
CPNE3-210ENST00000621245 DMBT1Q9UGM3 2413 aaPredicted RBP7.71□□□□□ -1.17
CPNE3-210ENST00000621245 TRAV4A0A0B4J268 109 aa7.71□□□□□ -1.18
CPNE3-210ENST00000621245 SRIP30626 198 aa7.71□□□□□ -1.18
CPNE3-210ENST00000621245 ERVFC1-1P60608 527 aa7.71□□□□□ -1.18
CPNE3-210ENST00000621245 CYCSP99999 105 aaKnown RBP7.71□□□□□ -1.18
CPNE3-210ENST00000621245 TDRG1Q3Y452 100 aa7.71□□□□□ -1.18
CPNE3-210ENST00000621245 FAM159AQ6UWV7 190 aa7.71□□□□□ -1.18
CPNE3-210ENST00000621245 DPPA3Q6W0C5 159 aa7.71□□□□□ -1.18
CPNE3-210ENST00000621245 IQCF2Q8IXL9 164 aa7.71□□□□□ -1.18
CPNE3-210ENST00000621245 TMEM75Q8N9X5 138 aa7.71□□□□□ -1.18
CPNE3-210ENST00000621245 PTTG2Q9NZH5 202 aa7.71□□□□□ -1.18
CPNE3-210ENST00000621245 LY96Q9Y6Y9 160 aa7.71□□□□□ -1.18
CPNE3-210ENST00000621245 FLG2Q5D862 2391 aaPredicted RBP7.71□□□□□ -1.18
CPNE3-210ENST00000621245 TRGV11A0A075B6L2 103 aa7.7□□□□□ -1.18
CPNE3-210ENST00000621245 IFNA5P01569 189 aa7.7□□□□□ -1.18
CPNE3-210ENST00000621245 ARL14EPLP0DKL9 152 aa7.7□□□□□ -1.18
CPNE3-210ENST00000621245 SLAQ13239 276 aa7.7□□□□□ -1.18
CPNE3-210ENST00000621245 SCGB1C1Q8TD33 95 aa7.7□□□□□ -1.18
CPNE3-210ENST00000621245 SPXQ9BT56 116 aa7.7□□□□□ -1.18
CPNE3-210ENST00000621245 LENEPQ9Y5L5 61 aa7.7□□□□□ -1.18
CPNE3-210ENST00000621245 M0R2P5 195 aa7.69□□□□□ -1.18
CPNE3-210ENST00000621245 GATA1P15976 413 aaPredicted RBP7.69□□□□□ -1.18
CPNE3-210ENST00000621245 TAS2R45P59539 299 aa7.69□□□□□ -1.18
CPNE3-210ENST00000621245 Q8N3U1 123 aa7.69□□□□□ -1.18
CPNE3-210ENST00000621245 OR4C5Q8NGB2 326 aa7.69□□□□□ -1.18
CPNE3-210ENST00000621245 TMED6Q8WW62 240 aa7.69□□□□□ -1.18
CPNE3-210ENST00000621245 TREM1Q9NP99 234 aa7.69□□□□□ -1.18
CPNE3-210ENST00000621245 MSRB1Q9NZV6 116 aa7.69□□□□□ -1.18
CPNE3-210ENST00000621245 ALG5Q9Y673 324 aa7.69□□□□□ -1.18
CPNE3-210ENST00000621245 IGHV3-73A0A0B4J1V6 119 aa7.68□□□□□ -1.18
CPNE3-210ENST00000621245 TRAV21A0A0B4J279 112 aa7.68□□□□□ -1.18
CPNE3-210ENST00000621245 GGTLC3B5MD39 225 aa7.68□□□□□ -1.18
CPNE3-210ENST00000621245 CRYGDP07320 174 aa7.68□□□□□ -1.18
CPNE3-210ENST00000621245 ACOT6Q3I5F7 207 aaPredicted RBP7.68□□□□□ -1.18
CPNE3-210ENST00000621245 Q5BKY6 102 aa7.68□□□□□ -1.18
CPNE3-210ENST00000621245 OR10G9Q8NGN4 311 aa7.68□□□□□ -1.18
CPNE3-210ENST00000621245 OR10G7Q8NGN6 311 aa7.68□□□□□ -1.18
CPNE3-210ENST00000621245 CMTM2Q8TAZ6 248 aa7.68□□□□□ -1.18
CPNE3-210ENST00000621245 PCNPQ8WW12 178 aaKnown RBP7.68□□□□□ -1.18
CPNE3-210ENST00000621245 SH3BGRL3Q9H299 93 aa7.68□□□□□ -1.18
CPNE3-210ENST00000621245 EPM2AB3EWF7 344 aa7.67□□□□□ -1.18
CPNE3-210ENST00000621245 C9JCJ5 164 aa7.67□□□□□ -1.18
CPNE3-210ENST00000621245 IGLV2-11P01706 119 aa7.67□□□□□ -1.18
CPNE3-210ENST00000621245 PET100P0DJ07 73 aa7.67□□□□□ -1.18
CPNE3-210ENST00000621245 CDC34P49427 236 aaPredicted RBP7.67□□□□□ -1.18
CPNE3-210ENST00000621245 PQLC2Q6ZP29 291 aa7.67□□□□□ -1.18
CPNE3-210ENST00000621245 Q6ZSN1 163 aa7.67□□□□□ -1.18
CPNE3-210ENST00000621245 SLC25A29Q8N8R3 303 aa7.67□□□□□ -1.18
CPNE3-210ENST00000621245 NHLRC2Q8NBF2 726 aa7.67□□□□□ -1.18
CPNE3-210ENST00000621245 HSD17B11Q8NBQ5 300 aa7.67□□□□□ -1.18
CPNE3-210ENST00000621245 ASB13Q8WXK3 278 aa7.67□□□□□ -1.18
CPNE3-210ENST00000621245 SDF2L1Q9HCN8 221 aa7.67□□□□□ -1.18
CPNE3-210ENST00000621245 HMCN2Q8NDA2 5059 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms