RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 Q86TA4 180 aa8.36□□□□□ -1.07
CDH1-214ENST00000621016 TMEM75Q8N9X5 138 aa8.36□□□□□ -1.07
CDH1-214ENST00000621016 DLX4Q92988 240 aaPredicted RBP8.36□□□□□ -1.07
CDH1-214ENST00000621016 RNF125Q96EQ8 232 aa8.36□□□□□ -1.07
CDH1-214ENST00000621016 TLN2Q9Y4G6 2542 aa8.36□□□□□ -1.07
CDH1-214ENST00000621016 SMKR1H3BMG3 65 aa8.36□□□□□ -1.07
CDH1-214ENST00000621016 RHODO00212 210 aa8.36□□□□□ -1.07
CDH1-214ENST00000621016 ECSCRQ19T08 205 aa8.36□□□□□ -1.07
CDH1-214ENST00000621016 LINC00311Q8N616 119 aa8.36□□□□□ -1.07
CDH1-214ENST00000621016 CHCHD1Q96BP2 118 aaKnown RBP8.36□□□□□ -1.07
CDH1-214ENST00000621016 FMC1Q96HJ9 113 aa8.36□□□□□ -1.07
CDH1-214ENST00000621016 LINC00527Q9UJ94 153 aa8.36□□□□□ -1.07
CDH1-214ENST00000621016 SORL1Q92673 2214 aa8.36□□□□□ -1.07
CDH1-214ENST00000621016 TMEM213A2RRL7 107 aa8.36□□□□□ -1.07
CDH1-214ENST00000621016 MYCNOSP40205 109 aa8.36□□□□□ -1.07
CDH1-214ENST00000621016 RAXQ9Y2V3 346 aa8.36□□□□□ -1.07
CDH1-214ENST00000621016 FLNCQ14315 2725 aa8.35□□□□□ -1.07
CDH1-214ENST00000621016 I3L2K1 104 aa8.35□□□□□ -1.07
CDH1-214ENST00000621016 K7EIM0 57 aa8.35□□□□□ -1.07
CDH1-214ENST00000621016 FAM231DQ6ZW35 169 aa8.35□□□□□ -1.07
CDH1-214ENST00000621016 C7orf69Q9H7B7 122 aa8.35□□□□□ -1.07
CDH1-214ENST00000621016 DPM3Q9P2X0 92 aa8.35□□□□□ -1.07
CDH1-214ENST00000621016 CELSR2Q9HCU4 2923 aa8.35□□□□□ -1.07
CDH1-214ENST00000621016 TMEM262E9PQX1 116 aa8.35□□□□□ -1.07
CDH1-214ENST00000621016 EDN2P20800 178 aa8.35□□□□□ -1.07
CDH1-214ENST00000621016 CEND1Q8N111 149 aa8.35□□□□□ -1.07
CDH1-214ENST00000621016 MLST8Q9BVC4 326 aa8.35□□□□□ -1.07
CDH1-214ENST00000621016 C21orf62Q9NYP8 219 aa8.35□□□□□ -1.07
CDH1-214ENST00000621016 NBR2O15453 112 aa8.34□□□□□ -1.07
CDH1-214ENST00000621016 PRSS1P07477 247 aa8.34□□□□□ -1.07
CDH1-214ENST00000621016 ZNF688P0C7X2 276 aa8.34□□□□□ -1.07
CDH1-214ENST00000621016 KAAG1Q9UBP8 84 aa8.34□□□□□ -1.07
CDH1-214ENST00000621016 A0A1B0GUT8 65 aa8.34□□□□□ -1.07
CDH1-214ENST00000621016 DYNAPQ8N1N2 210 aa8.34□□□□□ -1.07
CDH1-214ENST00000621016 ZNF491Q8N8L2 437 aa8.34□□□□□ -1.07
CDH1-214ENST00000621016 PPDPFLQ8WWR9 84 aa8.34□□□□□ -1.07
CDH1-214ENST00000621016 OTORQ9NRC9 128 aa8.34□□□□□ -1.07
CDH1-214ENST00000621016 NDPQ00604 133 aa8.34□□□□□ -1.07
CDH1-214ENST00000621016 RRN3P1Q2M238 152 aa8.34□□□□□ -1.07
CDH1-214ENST00000621016 HRCT1Q6UXD1 115 aa8.34□□□□□ -1.07
CDH1-214ENST00000621016 AMN1Q8IY45 258 aa8.34□□□□□ -1.07
CDH1-214ENST00000621016 TIMD4Q96H15 378 aa8.34□□□□□ -1.07
CDH1-214ENST00000621016 AAMDCQ9H7C9 122 aa8.34□□□□□ -1.07
CDH1-214ENST00000621016 TMEM160Q9NX00 188 aa8.34□□□□□ -1.07
CDH1-214ENST00000621016 IGKV3-7A0A075B6H7 116 aa8.33□□□□□ -1.08
CDH1-214ENST00000621016 TRBV19A0A075B6N1 114 aa8.33□□□□□ -1.08
CDH1-214ENST00000621016 LINC01549A6NIU2 74 aa8.33□□□□□ -1.08
CDH1-214ENST00000621016 H7C2G1 150 aa8.33□□□□□ -1.08
CDH1-214ENST00000621016 ORM1P02763 201 aa8.33□□□□□ -1.08
CDH1-214ENST00000621016 SCGB1C2P0DMR2 95 aa8.33□□□□□ -1.08
CDH1-214ENST00000621016 FAM162BQ5T6X4 162 aa8.33□□□□□ -1.08
CDH1-214ENST00000621016 ANKRD29Q8N6D5 301 aa8.33□□□□□ -1.08
CDH1-214ENST00000621016 USP9XQ93008 2570 aaPredicted RBP8.33□□□□□ -1.08
CDH1-214ENST00000621016 C10orf126Q8N4M7 172 aa8.33□□□□□ -1.08
CDH1-214ENST00000621016 KLF12Q9Y4X4 402 aa8.33□□□□□ -1.08
CDH1-214ENST00000621016 A0A1B0GXF2 115 aa8.32□□□□□ -1.08
CDH1-214ENST00000621016 C9JAW5 83 aa8.32□□□□□ -1.08
CDH1-214ENST00000621016 IGLV2-11P01706 119 aa8.32□□□□□ -1.08
CDH1-214ENST00000621016 CRIP1P50238 77 aa8.32□□□□□ -1.08
CDH1-214ENST00000621016 CFAP126Q5VTH2 177 aa8.32□□□□□ -1.08
CDH1-214ENST00000621016 LYZL1Q6UWQ5 148 aa8.32□□□□□ -1.08
CDH1-214ENST00000621016 RNF182Q8N6D2 247 aa8.32□□□□□ -1.08
CDH1-214ENST00000621016 MAPKAPK5-AS1Q8N8E1 139 aa8.32□□□□□ -1.08
CDH1-214ENST00000621016 C15orf53Q8NAA6 179 aa8.32□□□□□ -1.08
CDH1-214ENST00000621016 CITED2Q99967 270 aaPredicted RBP8.32□□□□□ -1.08
CDH1-214ENST00000621016 C19orf71A6NCJ1 209 aa8.32□□□□□ -1.08
CDH1-214ENST00000621016 D6R8Y8 96 aa8.32□□□□□ -1.08
CDH1-214ENST00000621016 CRYGBP07316 175 aa8.32□□□□□ -1.08
CDH1-214ENST00000621016 TWIST1Q15672 202 aa8.32□□□□□ -1.08
CDH1-214ENST00000621016 VKORC1Q9BQB6 163 aa8.32□□□□□ -1.08
CDH1-214ENST00000621016 PKIGQ9Y2B9 76 aa8.32□□□□□ -1.08
CDH1-214ENST00000621016 PRSS22Q9GZN4 317 aa8.32□□□□□ -1.08
CDH1-214ENST00000621016 CENPVL3A0A0U1RRI6 287 aa8.31□□□□□ -1.08
CDH1-214ENST00000621016 ZNF785A8K8V0 405 aa8.31□□□□□ -1.08
CDH1-214ENST00000621016 SPRY2O43597 315 aa8.31□□□□□ -1.08
CDH1-214ENST00000621016 ERCC8Q13216 396 aa8.31□□□□□ -1.08
CDH1-214ENST00000621016 WIPF2Q8TF74 440 aaPredicted RBP8.31□□□□□ -1.08
CDH1-214ENST00000621016 SHANK2-AS3Q9BTD1 123 aa8.31□□□□□ -1.08
CDH1-214ENST00000621016 MSRB1Q9NZV6 116 aa8.31□□□□□ -1.08
CDH1-214ENST00000621016 INS-IGF2F8WCM5 200 aa8.31□□□□□ -1.08
CDH1-214ENST00000621016 C4orf26Q17RF5 130 aa8.31□□□□□ -1.08
CDH1-214ENST00000621016 SIGLEC15Q6ZMC9 328 aa8.31□□□□□ -1.08
CDH1-214ENST00000621016 DEFB104AQ8WTQ1 72 aa8.31□□□□□ -1.08
CDH1-214ENST00000621016 PIEZO1Q92508 2521 aa8.31□□□□□ -1.08
CDH1-214ENST00000621016 MYO9AB2RTY4 2548 aa8.31□□□□□ -1.08
CDH1-214ENST00000621016 LY6DQ14210 128 aa8.31□□□□□ -1.08
CDH1-214ENST00000621016 C9orf153Q5TBE3 101 aa8.31□□□□□ -1.08
CDH1-214ENST00000621016 ATP5L2Q7Z4Y8 100 aa8.31□□□□□ -1.08
CDH1-214ENST00000621016 IFI27L1Q96BM0 104 aa8.31□□□□□ -1.08
CDH1-214ENST00000621016 CSMD2Q7Z408 3487 aa8.31□□□□□ -1.08
CDH1-214ENST00000621016 VMO1Q7Z5L0 202 aa8.3□□□□□ -1.08
CDH1-214ENST00000621016 TMEM219Q86XT9 240 aa8.3□□□□□ -1.08
CDH1-214ENST00000621016 TMEM8BA6NDV4 472 aa8.3□□□□□ -1.08
CDH1-214ENST00000621016 G3V318 75 aa8.3□□□□□ -1.08
CDH1-214ENST00000621016 NPFFO15130 113 aa8.3□□□□□ -1.08
CDH1-214ENST00000621016 RIGQ13278 110 aa8.3□□□□□ -1.08
CDH1-214ENST00000621016 TEN1Q86WV5 123 aa8.3□□□□□ -1.08
CDH1-214ENST00000621016 RASL10AQ92737 203 aa8.3□□□□□ -1.08
CDH1-214ENST00000621016 HLA-DRB4P13762 266 aa8.29□□□□□ -1.08
CDH1-214ENST00000621016 ZFP36P26651 326 aaKnown RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms