RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 H3BMG7 143 aa5.46□□□□□ -1.54
NEDD9-216ENST00000620854 IGHV4-39P01824 125 aa5.46□□□□□ -1.54
NEDD9-216ENST00000620854 SCGB1A1P11684 91 aa5.46□□□□□ -1.54
NEDD9-216ENST00000620854 AZU1P20160 251 aa5.46□□□□□ -1.54
NEDD9-216ENST00000620854 SRSF1Q07955 248 aaKnown RBP eCLIP5.46□□□□□ -1.54
NEDD9-216ENST00000620854 CIRBPQ14011 172 aaKnown RBP5.46□□□□□ -1.54
NEDD9-216ENST00000620854 RRN3P1Q2M238 152 aa5.46□□□□□ -1.54
NEDD9-216ENST00000620854 FAM104BQ5XKR9 115 aa5.46□□□□□ -1.54
NEDD9-216ENST00000620854 ITLN2Q8WWU7 325 aaPredicted RBP5.46□□□□□ -1.54
NEDD9-216ENST00000620854 TMEM158Q8WZ71 300 aa5.46□□□□□ -1.54
NEDD9-216ENST00000620854 UBE2L6O14933 153 aa5.45□□□□□ -1.54
NEDD9-216ENST00000620854 GATA4P43694 442 aa5.45□□□□□ -1.54
NEDD9-216ENST00000620854 ERCC8Q13216 396 aa5.45□□□□□ -1.54
NEDD9-216ENST00000620854 ADAMTSL5Q6ZMM2 481 aa5.45□□□□□ -1.54
NEDD9-216ENST00000620854 NPC2P61916 151 aa5.45□□□□□ -1.54
NEDD9-216ENST00000620854 MRGPRG-AS1Q2M3A8 158 aa5.45□□□□□ -1.54
NEDD9-216ENST00000620854 BRD3OSQ6XYD6 125 aa5.45□□□□□ -1.54
NEDD9-216ENST00000620854 C14orf178Q8N769 122 aaPredicted RBP5.45□□□□□ -1.54
NEDD9-216ENST00000620854 RAX2Q96IS3 184 aa5.45□□□□□ -1.54
NEDD9-216ENST00000620854 SLC50A1Q9BRV3 221 aa5.45□□□□□ -1.54
NEDD9-216ENST00000620854 TSSC4Q9Y5U2 329 aaPredicted RBP5.45□□□□□ -1.54
NEDD9-216ENST00000620854 TRAV40A0A0B4J280 105 aa5.45□□□□□ -1.54
NEDD9-216ENST00000620854 EGR2P11161 476 aaPredicted RBP5.45□□□□□ -1.54
NEDD9-216ENST00000620854 DSCR9P59020 149 aa5.45□□□□□ -1.54
NEDD9-216ENST00000620854 SIGLEC15Q6ZMC9 328 aa5.45□□□□□ -1.54
NEDD9-216ENST00000620854 CHTOPQ9Y3Y2 248 aaKnown RBP5.45□□□□□ -1.54
NEDD9-216ENST00000620854 TRAV26-2A0A0B4J265 109 aa5.44□□□□□ -1.54
NEDD9-216ENST00000620854 HOXA3O43365 443 aaPredicted RBP5.44□□□□□ -1.54
NEDD9-216ENST00000620854 PRB1P04280 392 aa5.44□□□□□ -1.54
NEDD9-216ENST00000620854 CRYGCP07315 174 aa5.44□□□□□ -1.54
NEDD9-216ENST00000620854 ZNF688P0C7X2 276 aa5.44□□□□□ -1.54
NEDD9-216ENST00000620854 C5orf64Q2M2E5 130 aa5.44□□□□□ -1.54
NEDD9-216ENST00000620854 TMEM95Q3KNT9 176 aa5.44□□□□□ -1.54
NEDD9-216ENST00000620854 PAPPA-AS1Q5QFB9 102 aa5.44□□□□□ -1.54
NEDD9-216ENST00000620854 DUX3Q96PT4 197 aa5.44□□□□□ -1.54
NEDD9-216ENST00000620854 VGLL1Q99990 258 aa5.44□□□□□ -1.54
NEDD9-216ENST00000620854 VCX2Q9H322 139 aa5.44□□□□□ -1.54
NEDD9-216ENST00000620854 IGHV3-73A0A0B4J1V6 119 aa5.44□□□□□ -1.54
NEDD9-216ENST00000620854 TRAV21A0A0B4J279 112 aa5.44□□□□□ -1.54
NEDD9-216ENST00000620854 J3QKU1 62 aa5.44□□□□□ -1.54
NEDD9-216ENST00000620854 NPFFO15130 113 aa5.44□□□□□ -1.54
NEDD9-216ENST00000620854 LOXP28300 417 aaPredicted RBP5.44□□□□□ -1.54
NEDD9-216ENST00000620854 ZNF80P51504 273 aaPredicted RBP5.44□□□□□ -1.54
NEDD9-216ENST00000620854 GAGE13Q4V321 117 aa5.44□□□□□ -1.54
NEDD9-216ENST00000620854 TNFRSF14Q92956 283 aa5.44□□□□□ -1.54
NEDD9-216ENST00000620854 BPESC1Q9GZL8 116 aa5.44□□□□□ -1.54
NEDD9-216ENST00000620854 BUB1B-PAK6H3BSN5 160 aa5.44□□□□□ -1.54
NEDD9-216ENST00000620854 TSPAN13O95857 204 aa5.44□□□□□ -1.54
NEDD9-216ENST00000620854 PAX8Q06710 450 aa5.44□□□□□ -1.54
NEDD9-216ENST00000620854 LGALS9BQ3B8N2 356 aa5.44□□□□□ -1.54
NEDD9-216ENST00000620854 LGALS9CQ6DKI2 356 aa5.44□□□□□ -1.54
NEDD9-216ENST00000620854 VMO1Q7Z5L0 202 aa5.44□□□□□ -1.54
NEDD9-216ENST00000620854 RNF182Q8N6D2 247 aa5.44□□□□□ -1.54
NEDD9-216ENST00000620854 ZNF491Q8N8L2 437 aa5.44□□□□□ -1.54
NEDD9-216ENST00000620854 OR9G4Q8NGQ1 327 aa5.44□□□□□ -1.54
NEDD9-216ENST00000620854 SIGMAR1Q99720 223 aa5.44□□□□□ -1.54
NEDD9-216ENST00000620854 A0A1W2PRX2 142 aa5.43□□□□□ -1.54
NEDD9-216ENST00000620854 DNAL4O96015 105 aa5.43□□□□□ -1.54
NEDD9-216ENST00000620854 TMEM155Q4W5P6 130 aa5.43□□□□□ -1.54
NEDD9-216ENST00000620854 OR5A1Q8NGJ0 315 aa5.43□□□□□ -1.54
NEDD9-216ENST00000620854 CHAC1Q9BUX1 264 aa5.43□□□□□ -1.54
NEDD9-216ENST00000620854 EPG5Q9HCE0 2579 aa5.43□□□□□ -1.54
NEDD9-216ENST00000620854 ZFHX3Q15911 3703 aa5.43□□□□□ -1.54
NEDD9-216ENST00000620854 OVOL3O00110 214 aa5.43□□□□□ -1.54
NEDD9-216ENST00000620854 INSL3P51460 131 aa5.43□□□□□ -1.54
NEDD9-216ENST00000620854 ADORA2A-AS1P86434 159 aa5.43□□□□□ -1.54
NEDD9-216ENST00000620854 TRBV25-1A0A075B6N4 114 aa5.43□□□□□ -1.54
NEDD9-216ENST00000620854 TEX22C9J3V5 150 aa5.43□□□□□ -1.54
NEDD9-216ENST00000620854 PRTN3P24158 256 aa5.43□□□□□ -1.54
NEDD9-216ENST00000620854 LAGE3Q14657 143 aa5.43□□□□□ -1.54
NEDD9-216ENST00000620854 PSMG4Q5JS54 123 aa5.43□□□□□ -1.54
NEDD9-216ENST00000620854 TEX36Q5VZQ5 186 aa5.43□□□□□ -1.54
NEDD9-216ENST00000620854 NEGR1Q7Z3B1 354 aa5.43□□□□□ -1.54
NEDD9-216ENST00000620854 LINC01587Q99440 93 aa5.43□□□□□ -1.54
NEDD9-216ENST00000620854 SHANK2-AS3Q9BTD1 123 aa5.43□□□□□ -1.54
NEDD9-216ENST00000620854 NCOR1P1Q9H4R4 102 aa5.43□□□□□ -1.54
NEDD9-216ENST00000620854 PRORYQ9H606 182 aa5.43□□□□□ -1.54
NEDD9-216ENST00000620854 LINC00574Q9H8X3 128 aa5.43□□□□□ -1.54
NEDD9-216ENST00000620854 USP9YO00507 2555 aaPredicted RBP5.43□□□□□ -1.54
NEDD9-216ENST00000620854 USP9XQ93008 2570 aaPredicted RBP5.43□□□□□ -1.54
NEDD9-216ENST00000620854 TMEM262E9PQX1 116 aa5.43□□□□□ -1.54
NEDD9-216ENST00000620854 I3L2K1 104 aa5.43□□□□□ -1.54
NEDD9-216ENST00000620854 ORMDL2Q53FV1 153 aa5.43□□□□□ -1.54
NEDD9-216ENST00000620854 C1orf122Q6ZSJ8 110 aa5.43□□□□□ -1.54
NEDD9-216ENST00000620854 A0A087WWL8 130 aa5.42□□□□□ -1.54
NEDD9-216ENST00000620854 SHISA9B4DS77 424 aa5.42□□□□□ -1.54
NEDD9-216ENST00000620854 B4DSR2 109 aa5.42□□□□□ -1.54
NEDD9-216ENST00000620854 K7EIM0 57 aa5.42□□□□□ -1.54
NEDD9-216ENST00000620854 Q6ZQT7 251 aa5.42□□□□□ -1.54
NEDD9-216ENST00000620854 MAPKAPK5-AS1Q8N8E1 139 aa5.42□□□□□ -1.54
NEDD9-216ENST00000620854 MRPL35Q9NZE8 188 aaKnown RBP5.42□□□□□ -1.54
NEDD9-216ENST00000620854 H7C1H1 209 aa5.42□□□□□ -1.54
NEDD9-216ENST00000620854 ZNF562Q6V9R5 426 aa5.42□□□□□ -1.54
NEDD9-216ENST00000620854 CLUHP3Q96NS8 147 aa5.42□□□□□ -1.54
NEDD9-216ENST00000620854 HIVEP2P31629 2446 aa5.42□□□□□ -1.54
NEDD9-216ENST00000620854 TRAV41A0A0B4J266 112 aa5.41□□□□□ -1.54
NEDD9-216ENST00000620854 INS-IGF2F8WCM5 200 aa5.41□□□□□ -1.54
NEDD9-216ENST00000620854 G3V318 75 aa5.41□□□□□ -1.54
NEDD9-216ENST00000620854 TNFRSF6BO95407 300 aa5.41□□□□□ -1.54
NEDD9-216ENST00000620854 ZNF876PQ49A33 203 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms