RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 TRBV19A0A075B6N1 114 aa3.97□□□□□ -1.77
VPS13D-214ENST00000620676 IGHV4-28A0A0C4DH34 117 aa3.97□□□□□ -1.77
VPS13D-214ENST00000620676 ITLN2Q8WWU7 325 aaPredicted RBP3.97□□□□□ -1.77
VPS13D-214ENST00000620676 PRAC2D3DTV9 90 aa3.97□□□□□ -1.77
VPS13D-214ENST00000620676 DUSP14O95147 198 aaKnown RBP3.97□□□□□ -1.77
VPS13D-214ENST00000620676 SLPIP03973 132 aa3.97□□□□□ -1.77
VPS13D-214ENST00000620676 PRIMA1Q86XR5 153 aa3.97□□□□□ -1.77
VPS13D-214ENST00000620676 TMEM258P61165 79 aa3.97□□□□□ -1.77
VPS13D-214ENST00000620676 FAM27E3Q08E93 113 aa3.97□□□□□ -1.77
VPS13D-214ENST00000620676 DEFB105AQ8NG35 78 aa3.97□□□□□ -1.77
VPS13D-214ENST00000620676 IQCF6A8MYZ5 107 aa3.97□□□□□ -1.77
VPS13D-214ENST00000620676 FAM167A-AS1Q96KT0 104 aa3.97□□□□□ -1.77
VPS13D-214ENST00000620676 SMIM9A6NGZ8 99 aa3.97□□□□□ -1.77
VPS13D-214ENST00000620676 GAS8-AS1O95177 125 aa3.97□□□□□ -1.77
VPS13D-214ENST00000620676 GHRHP01286 108 aa3.97□□□□□ -1.77
VPS13D-214ENST00000620676 SIGLEC15Q6ZMC9 328 aa3.97□□□□□ -1.77
VPS13D-214ENST00000620676 NBR2O15453 112 aa3.97□□□□□ -1.77
VPS13D-214ENST00000620676 CFHR4Q92496 578 aa3.97□□□□□ -1.77
VPS13D-214ENST00000620676 RETNQ9HD89 108 aa3.97□□□□□ -1.77
VPS13D-214ENST00000620676 DSCR8Q96T75 97 aa3.97□□□□□ -1.77
VPS13D-214ENST00000620676 FGF23Q9GZV9 251 aaPredicted RBP3.97□□□□□ -1.77
VPS13D-214ENST00000620676 NDUFA4L2Q9NRX3 87 aa3.97□□□□□ -1.77
VPS13D-214ENST00000620676 TET1Q8NFU7 2136 aa3.97□□□□□ -1.77
VPS13D-214ENST00000620676 NFE4Q86UQ8 179 aa3.97□□□□□ -1.77
VPS13D-214ENST00000620676 SPRR3Q9UBC9 169 aa3.97□□□□□ -1.77
VPS13D-214ENST00000620676 MGAMO43451 1857 aa3.96□□□□□ -1.77
VPS13D-214ENST00000620676 FAM231DQ6ZW35 169 aa3.96□□□□□ -1.77
VPS13D-214ENST00000620676 PRR25Q96S07 402 aa3.96□□□□□ -1.77
VPS13D-214ENST00000620676 NXPH4O95158 308 aa3.96□□□□□ -1.77
VPS13D-214ENST00000620676 ZNF295-AS1Q8N0V1 137 aa3.96□□□□□ -1.78
VPS13D-214ENST00000620676 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.96□□□□□ -1.78
VPS13D-214ENST00000620676 UFSP1Q6NVU6 142 aa3.96□□□□□ -1.78
VPS13D-214ENST00000620676 MORN3Q6PF18 240 aaPredicted RBP3.96□□□□□ -1.78
VPS13D-214ENST00000620676 C9orf106Q8NAJ2 232 aa3.96□□□□□ -1.78
VPS13D-214ENST00000620676 LGALS9O00182 355 aa3.96□□□□□ -1.78
VPS13D-214ENST00000620676 HTN3P15516 51 aa3.96□□□□□ -1.78
VPS13D-214ENST00000620676 DEFB1P60022 68 aa3.96□□□□□ -1.78
VPS13D-214ENST00000620676 LOXP28300 417 aaPredicted RBP3.96□□□□□ -1.78
VPS13D-214ENST00000620676 Q6ZS49 121 aa3.96□□□□□ -1.78
VPS13D-214ENST00000620676 CENPVQ7Z7K6 275 aaPredicted RBP3.96□□□□□ -1.78
VPS13D-214ENST00000620676 DPH3P1Q9H4G8 78 aa3.96□□□□□ -1.78
VPS13D-214ENST00000620676 HIGD1BQ9P298 99 aa3.96□□□□□ -1.78
VPS13D-214ENST00000620676 PLXNA3P51805 1871 aa3.96□□□□□ -1.78
VPS13D-214ENST00000620676 LYPD2Q6UXB3 125 aa3.96□□□□□ -1.78
VPS13D-214ENST00000620676 DYNAPQ8N1N2 210 aa3.96□□□□□ -1.78
VPS13D-214ENST00000620676 TRBV10-2A0A0K0K1G8 114 aa3.96□□□□□ -1.78
VPS13D-214ENST00000620676 LY6HO94772 140 aa3.96□□□□□ -1.78
VPS13D-214ENST00000620676 F8VRH5 84 aa3.96□□□□□ -1.78
VPS13D-214ENST00000620676 PATE2Q6UY27 113 aa3.96□□□□□ -1.78
VPS13D-214ENST00000620676 PAPPA2Q9BXP8 1791 aa3.96□□□□□ -1.78
VPS13D-214ENST00000620676 GTF3C1Q12789 2109 aa3.96□□□□□ -1.78
VPS13D-214ENST00000620676 NCR3O14931 201 aa3.96□□□□□ -1.78
VPS13D-214ENST00000620676 GREB1LQ9C091 1923 aaPredicted RBP3.96□□□□□ -1.78
VPS13D-214ENST00000620676 IGHV1OR15-1A0A075B7D0 117 aa3.96□□□□□ -1.78
VPS13D-214ENST00000620676 IGHV1-46P01743 117 aa3.96□□□□□ -1.78
VPS13D-214ENST00000620676 IGLV2-8P01709 118 aa3.95□□□□□ -1.78
VPS13D-214ENST00000620676 CT83Q5H943 113 aa3.95□□□□□ -1.78
VPS13D-214ENST00000620676 RASL10AQ92737 203 aa3.95□□□□□ -1.78
VPS13D-214ENST00000620676 MUC6Q6W4X9 2439 aa3.95□□□□□ -1.78
VPS13D-214ENST00000620676 C1orf195Q5TG92 126 aa3.95□□□□□ -1.78
VPS13D-214ENST00000620676 TANC1Q9C0D5 1861 aa3.95□□□□□ -1.78
VPS13D-214ENST00000620676 CLPSL2Q6UWE3 100 aa3.95□□□□□ -1.78
VPS13D-214ENST00000620676 SIGLEC9Q9Y336 463 aa3.95□□□□□ -1.78
VPS13D-214ENST00000620676 TRBV6-6A0A0A6YYG2 114 aa3.95□□□□□ -1.78
VPS13D-214ENST00000620676 COLCA1Q6ZS62 124 aa3.95□□□□□ -1.78
VPS13D-214ENST00000620676 FDCSPQ8NFU4 85 aa3.95□□□□□ -1.78
VPS13D-214ENST00000620676 ATP6V0E2Q8NHE4 81 aa3.95□□□□□ -1.78
VPS13D-214ENST00000620676 BUB1B-PAK6H3BSN5 160 aa3.95□□□□□ -1.78
VPS13D-214ENST00000620676 DEFB124Q8NES8 71 aa3.95□□□□□ -1.78
VPS13D-214ENST00000620676 Q71RC1 249 aaPredicted RBP3.95□□□□□ -1.78
VPS13D-214ENST00000620676 MBD6Q96DN6 1003 aa3.95□□□□□ -1.78
VPS13D-214ENST00000620676 DOCK6Q96HP0 2047 aa3.95□□□□□ -1.78
VPS13D-214ENST00000620676 TRGV1A0A0A0MS02 117 aa3.95□□□□□ -1.78
VPS13D-214ENST00000620676 IGHV1-18A0A0C4DH31 117 aa3.95□□□□□ -1.78
VPS13D-214ENST00000620676 LY6G5BQ8NDX9 201 aa3.95□□□□□ -1.78
VPS13D-214ENST00000620676 TMEM141Q96I45 108 aa3.95□□□□□ -1.78
VPS13D-214ENST00000620676 Q0VFX4 171 aa3.95□□□□□ -1.78
VPS13D-214ENST00000620676 C20orf197Q8N268 126 aa3.95□□□□□ -1.78
VPS13D-214ENST00000620676 F6UB75 175 aa3.95□□□□□ -1.78
VPS13D-214ENST00000620676 BAALCQ8WXS3 180 aa3.95□□□□□ -1.78
VPS13D-214ENST00000620676 DPH3Q96FX2 82 aa3.95□□□□□ -1.78
VPS13D-214ENST00000620676 DNAJC30Q96LL9 226 aa3.95□□□□□ -1.78
VPS13D-214ENST00000620676 LINC01548A6NM66 108 aa3.95□□□□□ -1.78
VPS13D-214ENST00000620676 UBE2E1P51965 193 aa3.95□□□□□ -1.78
VPS13D-214ENST00000620676 LINC00312Q9Y6C7 94 aa3.95□□□□□ -1.78
VPS13D-214ENST00000620676 C15orf65H3BRN8 121 aa3.95□□□□□ -1.78
VPS13D-214ENST00000620676 CEMP1Q6PRD7 247 aaPredicted RBP3.95□□□□□ -1.78
VPS13D-214ENST00000620676 SDHAF1A6NFY7 115 aa3.95□□□□□ -1.78
VPS13D-214ENST00000620676 COX7B2Q8TF08 81 aa3.95□□□□□ -1.78
VPS13D-214ENST00000620676 TRGV2A0A075B6R0 118 aa3.94□□□□□ -1.78
VPS13D-214ENST00000620676 SMIM2Q9BVW6 85 aa3.94□□□□□ -1.78
VPS13D-214ENST00000620676 ATOX1O00244 68 aa3.94□□□□□ -1.78
VPS13D-214ENST00000620676 TM4SF5O14894 197 aa3.94□□□□□ -1.78
VPS13D-214ENST00000620676 RPL35AP18077 110 aaKnown RBP3.94□□□□□ -1.78
VPS13D-214ENST00000620676 IGHV1-3A0A0C4DH29 117 aa3.94□□□□□ -1.78
VPS13D-214ENST00000620676 F8P00451 2351 aa3.94□□□□□ -1.78
VPS13D-214ENST00000620676 PVRIGQ6DKI7 326 aa3.94□□□□□ -1.78
VPS13D-214ENST00000620676 INAFM2P0DMQ5 153 aa3.94□□□□□ -1.78
VPS13D-214ENST00000620676 PSMB8P28062 276 aa3.94□□□□□ -1.78
VPS13D-214ENST00000620676 SLC50A1Q9BRV3 221 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms