RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 SLC25A20O43772 301 aa7.62□□□□□ -1.19
TNFAIP3-210ENST00000620204 LGALS1P09382 135 aaKnown RBP7.62□□□□□ -1.19
TNFAIP3-210ENST00000620204 DYNLRB1Q9NP97 96 aa7.62□□□□□ -1.19
TNFAIP3-210ENST00000620204 ZNF491Q8N8L2 437 aa7.62□□□□□ -1.19
TNFAIP3-210ENST00000620204 IGLV2-23P01705 113 aa7.62□□□□□ -1.19
TNFAIP3-210ENST00000620204 U3KQK5 164 aa7.62□□□□□ -1.19
TNFAIP3-210ENST00000620204 IGKV3-7A0A075B6H7 116 aa7.61□□□□□ -1.19
TNFAIP3-210ENST00000620204 TRAV2A0A0B4J234 112 aa7.61□□□□□ -1.19
TNFAIP3-210ENST00000620204 NDUFV3P56181 108 aaKnown RBP7.61□□□□□ -1.19
TNFAIP3-210ENST00000620204 FAM27E3Q08E93 113 aa7.61□□□□□ -1.19
TNFAIP3-210ENST00000620204 TMEM14CQ9P0S9 112 aa7.61□□□□□ -1.19
TNFAIP3-210ENST00000620204 RNF185Q96GF1 192 aa7.61□□□□□ -1.19
TNFAIP3-210ENST00000620204 TRBV7-3A0A075B6L6 115 aa7.61□□□□□ -1.19
TNFAIP3-210ENST00000620204 CRYGCP07315 174 aa7.61□□□□□ -1.19
TNFAIP3-210ENST00000620204 DLX6P56179 175 aa7.61□□□□□ -1.19
TNFAIP3-210ENST00000620204 GFRALQ6UXV0 394 aa7.61□□□□□ -1.19
TNFAIP3-210ENST00000620204 IL17RELQ6ZVW7 336 aa7.61□□□□□ -1.19
TNFAIP3-210ENST00000620204 C15orf53Q8NAA6 179 aa7.61□□□□□ -1.19
TNFAIP3-210ENST00000620204 F5H697 171 aa7.6□□□□□ -1.19
TNFAIP3-210ENST00000620204 LHBP01229 141 aa7.6□□□□□ -1.19
TNFAIP3-210ENST00000620204 Q6ZQT7 251 aa7.6□□□□□ -1.19
TNFAIP3-210ENST00000620204 AJUBAQ96IF1 538 aa7.6□□□□□ -1.19
TNFAIP3-210ENST00000620204 NACAE9PAV3 2078 aa7.6□□□□□ -1.19
TNFAIP3-210ENST00000620204 H3BRN7 92 aa7.6□□□□□ -1.19
TNFAIP3-210ENST00000620204 CRLF1O75462 422 aa7.6□□□□□ -1.19
TNFAIP3-210ENST00000620204 TRAV8-4A0A0B4J246 113 aa7.6□□□□□ -1.19
TNFAIP3-210ENST00000620204 SHISA9B4DS77 424 aa7.6□□□□□ -1.19
TNFAIP3-210ENST00000620204 HERVK_113P61574 105 aa7.6□□□□□ -1.19
TNFAIP3-210ENST00000620204 PRR30Q53SZ7 412 aaPredicted RBP7.6□□□□□ -1.19
TNFAIP3-210ENST00000620204 CFHR4Q92496 578 aa7.59□□□□□ -1.19
TNFAIP3-210ENST00000620204 SPG11Q96JI7 2443 aa7.59□□□□□ -1.19
TNFAIP3-210ENST00000620204 RPL11P62913 178 aaKnown RBP7.59□□□□□ -1.19
TNFAIP3-210ENST00000620204 C14orf178Q8N769 122 aaPredicted RBP7.59□□□□□ -1.19
TNFAIP3-210ENST00000620204 VCX2Q9H322 139 aa7.59□□□□□ -1.19
TNFAIP3-210ENST00000620204 SLC25A15Q9Y619 301 aa7.59□□□□□ -1.19
TNFAIP3-210ENST00000620204 PRAC2D3DTV9 90 aa7.59□□□□□ -1.19
TNFAIP3-210ENST00000620204 CRIP2P52943 208 aaPredicted RBP7.59□□□□□ -1.19
TNFAIP3-210ENST00000620204 MFAP4P55083 255 aa7.59□□□□□ -1.19
TNFAIP3-210ENST00000620204 ZNF56Q15929 161 aa7.59□□□□□ -1.19
TNFAIP3-210ENST00000620204 DYNAPQ8N1N2 210 aa7.59□□□□□ -1.19
TNFAIP3-210ENST00000620204 LYPD1Q8N2G4 141 aa7.59□□□□□ -1.19
TNFAIP3-210ENST00000620204 ZMAT4Q9H898 229 aa7.59□□□□□ -1.19
TNFAIP3-210ENST00000620204 LYNX1G3V0Z9 82 aa7.58□□□□□ -1.2
TNFAIP3-210ENST00000620204 LYNX1P0DP58 116 aa7.58□□□□□ -1.2
TNFAIP3-210ENST00000620204 C2orf66Q6UXQ4 117 aa7.58□□□□□ -1.2
TNFAIP3-210ENST00000620204 ATP6V0E2Q8NHE4 81 aa7.58□□□□□ -1.2
TNFAIP3-210ENST00000620204 NPC2P61916 151 aa7.58□□□□□ -1.2
TNFAIP3-210ENST00000620204 FAM208BQ5VWN6 2430 aa7.58□□□□□ -1.2
TNFAIP3-210ENST00000620204 TEX49A0A1B0GTD5 131 aa7.58□□□□□ -1.2
TNFAIP3-210ENST00000620204 OVOL3O00110 214 aa7.58□□□□□ -1.2
TNFAIP3-210ENST00000620204 PVRIGQ6DKI7 326 aa7.58□□□□□ -1.2
TNFAIP3-210ENST00000620204 I3L2K1 104 aa7.57□□□□□ -1.2
TNFAIP3-210ENST00000620204 LGALS3P17931 250 aaKnown RBP7.57□□□□□ -1.2
TNFAIP3-210ENST00000620204 NDUFA11Q86Y39 141 aa7.57□□□□□ -1.2
TNFAIP3-210ENST00000620204 RPL39LQ96EH5 51 aaKnown RBP7.57□□□□□ -1.2
TNFAIP3-210ENST00000620204 PRO1854Q9UHT4 67 aa7.57□□□□□ -1.2
TNFAIP3-210ENST00000620204 PAX8Q06710 450 aa7.57□□□□□ -1.2
TNFAIP3-210ENST00000620204 C21orf62Q9NYP8 219 aa7.57□□□□□ -1.2
TNFAIP3-210ENST00000620204 IGHV1-3A0A0C4DH29 117 aa7.57□□□□□ -1.2
TNFAIP3-210ENST00000620204 K7EIM0 57 aa7.57□□□□□ -1.2
TNFAIP3-210ENST00000620204 IGLV1-44P01699 117 aa7.57□□□□□ -1.2
TNFAIP3-210ENST00000620204 IGHV1-8P0DP01 117 aa7.57□□□□□ -1.2
TNFAIP3-210ENST00000620204 PHLDA3Q9Y5J5 127 aa7.57□□□□□ -1.2
TNFAIP3-210ENST00000620204 ADGRG4Q8IZF6 3080 aa7.57□□□□□ -1.2
TNFAIP3-210ENST00000620204 ID1P41134 155 aa7.56□□□□□ -1.2
TNFAIP3-210ENST00000620204 C1orf162Q8NEQ5 155 aaPredicted RBP7.56□□□□□ -1.2
TNFAIP3-210ENST00000620204 IGLC6P0CF74 106 aa7.56□□□□□ -1.2
TNFAIP3-210ENST00000620204 ADIPOQQ15848 244 aa7.56□□□□□ -1.2
TNFAIP3-210ENST00000620204 MRPL23Q16540 153 aaKnown RBP7.56□□□□□ -1.2
TNFAIP3-210ENST00000620204 PIFOQ8TCI5 191 aa7.56□□□□□ -1.2
TNFAIP3-210ENST00000620204 CHCHD5Q9BSY4 110 aa7.56□□□□□ -1.2
TNFAIP3-210ENST00000620204 INS-IGF2F8WCM5 200 aa7.56□□□□□ -1.2
TNFAIP3-210ENST00000620204 TIMM23O14925 209 aa7.56□□□□□ -1.2
TNFAIP3-210ENST00000620204 SMIM2Q9BVW6 85 aa7.56□□□□□ -1.2
TNFAIP3-210ENST00000620204 TEX22C9J3V5 150 aa7.55□□□□□ -1.2
TNFAIP3-210ENST00000620204 LY6DQ14210 128 aa7.55□□□□□ -1.2
TNFAIP3-210ENST00000620204 TMEM95Q3KNT9 176 aa7.55□□□□□ -1.2
TNFAIP3-210ENST00000620204 Q6ZS46 218 aa7.55□□□□□ -1.2
TNFAIP3-210ENST00000620204 Q8N1Y9 231 aa7.55□□□□□ -1.2
TNFAIP3-210ENST00000620204 A4D1N5 150 aa7.55□□□□□ -1.2
TNFAIP3-210ENST00000620204 ADARB2-AS1A8MUL3 147 aa7.55□□□□□ -1.2
TNFAIP3-210ENST00000620204 NHLRC4P0CG21 123 aaPredicted RBP7.55□□□□□ -1.2
TNFAIP3-210ENST00000620204 SUMO2P61956 95 aaKnown RBP7.55□□□□□ -1.2
TNFAIP3-210ENST00000620204 TMEM30BQ3MIR4 351 aa7.55□□□□□ -1.2
TNFAIP3-210ENST00000620204 ORMDL2Q53FV1 153 aa7.55□□□□□ -1.2
TNFAIP3-210ENST00000620204 ZNF474Q6S9Z5 364 aaPredicted RBP7.55□□□□□ -1.2
TNFAIP3-210ENST00000620204 C2orf82Q6UX34 121 aa7.55□□□□□ -1.2
TNFAIP3-210ENST00000620204 C10orf126Q8N4M7 172 aa7.55□□□□□ -1.2
TNFAIP3-210ENST00000620204 GATD1Q8NB37 220 aa7.55□□□□□ -1.2
TNFAIP3-210ENST00000620204 ANKHD1Q8IWZ3 2542 aaKnown RBP7.55□□□□□ -1.2
TNFAIP3-210ENST00000620204 ZZEF1O43149 2961 aa7.55□□□□□ -1.2
TNFAIP3-210ENST00000620204 RHODO00212 210 aa7.55□□□□□ -1.2
TNFAIP3-210ENST00000620204 LINC01559Q495D7 138 aa7.55□□□□□ -1.2
TNFAIP3-210ENST00000620204 TIMD4Q96H15 378 aa7.55□□□□□ -1.2
TNFAIP3-210ENST00000620204 DUSP14O95147 198 aaKnown RBP7.54□□□□□ -1.2
TNFAIP3-210ENST00000620204 ECSCRQ19T08 205 aa7.54□□□□□ -1.2
TNFAIP3-210ENST00000620204 C22orf34Q6ZV56 151 aa7.54□□□□□ -1.2
TNFAIP3-210ENST00000620204 ZNF256Q9Y2P7 627 aaPredicted RBP7.54□□□□□ -1.2
TNFAIP3-210ENST00000620204 EPG5Q9HCE0 2579 aa7.54□□□□□ -1.2
TNFAIP3-210ENST00000620204 PKD1L2Q7Z442 2459 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms