RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	AGPAT4-IT1	Q9H0P7	198 aa		11.14	□□□□□ -0.63
SMTN-223	ENST00000619644	GAGE13	Q4V321	117 aa		11.14	□□□□□ -0.63
SMTN-223	ENST00000619644	TRAV40	A0A0B4J280	105 aa		11.14	□□□□□ -0.63
SMTN-223	ENST00000619644	BUB3	O43684	328 aa		11.14	□□□□□ -0.63
SMTN-223	ENST00000619644	SRSF1	Q07955	248 aa	Known RBP eCLIP	11.14	□□□□□ -0.63
SMTN-223	ENST00000619644	C16orf92	Q96LL3	132 aa		11.14	□□□□□ -0.63
SMTN-223	ENST00000619644	RAX	Q9Y2V3	346 aa		11.14	□□□□□ -0.63
SMTN-223	ENST00000619644	SCGB2A2	Q13296	93 aa		11.13	□□□□□ -0.63
SMTN-223	ENST00000619644	WFDC12	Q8WWY7	111 aa		11.13	□□□□□ -0.63
SMTN-223	ENST00000619644	LINC01546	A6NGU7	62 aa		11.13	□□□□□ -0.63
SMTN-223	ENST00000619644		H3BVH4	76 aa		11.13	□□□□□ -0.63
SMTN-223	ENST00000619644	DEFB1	P60022	68 aa		11.13	□□□□□ -0.63
SMTN-223	ENST00000619644	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		11.13	□□□□□ -0.63
SMTN-223	ENST00000619644	METTL26	Q96S19	204 aa		11.13	□□□□□ -0.63
SMTN-223	ENST00000619644	NXT2	Q9NPJ8	142 aa	Known RBP	11.13	□□□□□ -0.63
SMTN-223	ENST00000619644	C11orf21	Q9P2W6	132 aa		11.13	□□□□□ -0.63
SMTN-223	ENST00000619644	TCTEX1D4	Q5JR98	221 aa		11.13	□□□□□ -0.63
SMTN-223	ENST00000619644	ZNF502	Q8TBZ5	544 aa		11.13	□□□□□ -0.63
SMTN-223	ENST00000619644	MRPL35	Q9NZE8	188 aa	Known RBP	11.13	□□□□□ -0.63
SMTN-223	ENST00000619644	PRO0461	Q9UI25	63 aa		11.13	□□□□□ -0.63
SMTN-223	ENST00000619644	IGKV3D-20	A0A0C4DH25	116 aa		11.12	□□□□□ -0.63
SMTN-223	ENST00000619644		M0R381	172 aa		11.12	□□□□□ -0.63
SMTN-223	ENST00000619644	ATP5L	O75964	103 aa		11.12	□□□□□ -0.63
SMTN-223	ENST00000619644	AGRN	O00468	2067 aa		11.12	□□□□□ -0.63
SMTN-223	ENST00000619644	TRAV26-1	A0A087WT03	109 aa		11.12	□□□□□ -0.63
SMTN-223	ENST00000619644	HLA-DRB4	P13762	266 aa		11.12	□□□□□ -0.63
SMTN-223	ENST00000619644	ZNF48	Q96MX3	618 aa	Predicted RBP	11.12	□□□□□ -0.63
SMTN-223	ENST00000619644	HIST1H4G	Q99525	98 aa		11.12	□□□□□ -0.63
SMTN-223	ENST00000619644	HLA-DRB4	X5D2U9	266 aa		11.12	□□□□□ -0.63
SMTN-223	ENST00000619644	GLMP	Q8WWB7	406 aa		11.11	□□□□□ -0.63
SMTN-223	ENST00000619644	S100A4	P26447	101 aa	Known RBP	11.11	□□□□□ -0.63
SMTN-223	ENST00000619644	EFNA4	P52798	201 aa		11.11	□□□□□ -0.63
SMTN-223	ENST00000619644	RRN3P1	Q2M238	152 aa		11.11	□□□□□ -0.63
SMTN-223	ENST00000619644	ZNF575	Q86XF7	245 aa		11.11	□□□□□ -0.63
SMTN-223	ENST00000619644	MYOZ3	Q8TDC0	251 aa		11.11	□□□□□ -0.63
SMTN-223	ENST00000619644		A0A1B0GWB2	263 aa		11.11	□□□□□ -0.63
SMTN-223	ENST00000619644	MINOS1	Q5TGZ0	78 aa		11.11	□□□□□ -0.63
SMTN-223	ENST00000619644	C8orf86	Q6ZUL3	223 aa		11.11	□□□□□ -0.63
SMTN-223	ENST00000619644		Q8N6K4	173 aa		11.11	□□□□□ -0.63
SMTN-223	ENST00000619644	FAM110D	Q8TAY7	271 aa	Predicted RBP	11.11	□□□□□ -0.63
SMTN-223	ENST00000619644	CCDC140	Q96MF4	163 aa		11.11	□□□□□ -0.63
SMTN-223	ENST00000619644	C20orf78	Q9BR46	151 aa		11.11	□□□□□ -0.63
SMTN-223	ENST00000619644	MINOS1-NBL1	R4GNA1	71 aa		11.11	□□□□□ -0.63
SMTN-223	ENST00000619644		A0A1W2PPR1	153 aa		11.1	□□□□□ -0.63
SMTN-223	ENST00000619644	TAL2	Q16559	108 aa		11.1	□□□□□ -0.63
SMTN-223	ENST00000619644	EEF1AKMT3	Q96AZ1	226 aa		11.1	□□□□□ -0.63
SMTN-223	ENST00000619644	MRAP2	Q96G30	205 aa		11.1	□□□□□ -0.63
SMTN-223	ENST00000619644	BPESC1	Q9GZL8	116 aa		11.1	□□□□□ -0.63
SMTN-223	ENST00000619644	IGF1	P05019	195 aa		11.1	□□□□□ -0.63
SMTN-223	ENST00000619644	COX8C	Q7Z4L0	72 aa		11.1	□□□□□ -0.63
SMTN-223	ENST00000619644	ZFAND3	Q9H8U3	227 aa		11.1	□□□□□ -0.63
SMTN-223	ENST00000619644	CSPG4	Q6UVK1	2322 aa		11.09	□□□□□ -0.63
SMTN-223	ENST00000619644	IGHV3-11	P01762	117 aa		11.09	□□□□□ -0.63
SMTN-223	ENST00000619644	LCNL1	Q6ZST4	164 aa		11.09	□□□□□ -0.63
SMTN-223	ENST00000619644	CREBBP	Q92793	2442 aa		11.09	□□□□□ -0.63
SMTN-223	ENST00000619644	APOM	O95445	188 aa		11.09	□□□□□ -0.63
SMTN-223	ENST00000619644	LINC01559	Q495D7	138 aa		11.09	□□□□□ -0.63
SMTN-223	ENST00000619644	BRD3OS	Q6XYD6	125 aa		11.09	□□□□□ -0.63
SMTN-223	ENST00000619644	SLC50A1	Q9BRV3	221 aa		11.09	□□□□□ -0.63
SMTN-223	ENST00000619644	CRYBA4	P53673	196 aa		11.09	□□□□□ -0.63
SMTN-223	ENST00000619644	LY6E	Q16553	131 aa		11.09	□□□□□ -0.63
SMTN-223	ENST00000619644	MGP	P08493	103 aa		11.08	□□□□□ -0.64
SMTN-223	ENST00000619644	GEMIN7	Q9H840	131 aa	Known RBP	11.08	□□□□□ -0.64
SMTN-223	ENST00000619644	NBL1	P41271	181 aa		11.08	□□□□□ -0.64
SMTN-223	ENST00000619644	FBXL19-AS1	Q494R0	122 aa		11.08	□□□□□ -0.64
SMTN-223	ENST00000619644	C11orf71	Q6IPW1	123 aa		11.08	□□□□□ -0.64
SMTN-223	ENST00000619644		Q8N8P6	123 aa		11.08	□□□□□ -0.64
SMTN-223	ENST00000619644	CNFN	Q9BYD5	112 aa		11.08	□□□□□ -0.64
SMTN-223	ENST00000619644	SIRPD	Q9H106	197 aa		11.08	□□□□□ -0.64
SMTN-223	ENST00000619644	TRBV7-3	A0A075B6L6	115 aa		11.07	□□□□□ -0.64
SMTN-223	ENST00000619644	CLPSL1	A2RUU4	121 aa		11.07	□□□□□ -0.64
SMTN-223	ENST00000619644	OOSP1	A8MZH6	123 aa		11.07	□□□□□ -0.64
SMTN-223	ENST00000619644	DOPEY2	Q9Y3R5	2298 aa		11.07	□□□□□ -0.64
SMTN-223	ENST00000619644	IGLV2-18	A0A075B6J9	118 aa		11.07	□□□□□ -0.64
SMTN-223	ENST00000619644	KLRB1	Q12918	225 aa		11.07	□□□□□ -0.64
SMTN-223	ENST00000619644	SYT8	Q8NBV8	401 aa		11.07	□□□□□ -0.64
SMTN-223	ENST00000619644	SRD5A1	P18405	259 aa		11.07	□□□□□ -0.64
SMTN-223	ENST00000619644	LAGE3	Q14657	143 aa		11.07	□□□□□ -0.64
SMTN-223	ENST00000619644	MRPL16	Q9NX20	251 aa	Known RBP	11.07	□□□□□ -0.64
SMTN-223	ENST00000619644	TRAV8-2	A0A0B4J237	113 aa		11.06	□□□□□ -0.64
SMTN-223	ENST00000619644	UBE2E1	P51965	193 aa		11.06	□□□□□ -0.64
SMTN-223	ENST00000619644	FOXI1	Q12951	378 aa		11.06	□□□□□ -0.64
SMTN-223	ENST00000619644		A0A087WX48	190 aa		11.05	□□□□□ -0.64
SMTN-223	ENST00000619644	LY6D	Q14210	128 aa		11.05	□□□□□ -0.64
SMTN-223	ENST00000619644	EBI3	Q14213	229 aa		11.05	□□□□□ -0.64
SMTN-223	ENST00000619644	C14orf178	Q8N769	122 aa	Predicted RBP	11.05	□□□□□ -0.64
SMTN-223	ENST00000619644	PSMG3-AS1	Q96PY0	264 aa		11.05	□□□□□ -0.64
SMTN-223	ENST00000619644	VPS13C	Q709C8	3753 aa		11.05	□□□□□ -0.64
SMTN-223	ENST00000619644		F6UB75	175 aa		11.05	□□□□□ -0.64
SMTN-223	ENST00000619644	MORN3	Q6PF18	240 aa	Predicted RBP	11.05	□□□□□ -0.64
SMTN-223	ENST00000619644	C1orf122	Q6ZSJ8	110 aa		11.05	□□□□□ -0.64
SMTN-223	ENST00000619644	C1QTNF4	Q9BXJ3	329 aa		11.05	□□□□□ -0.64
SMTN-223	ENST00000619644	CDIP1	Q9H305	208 aa		11.05	□□□□□ -0.64
SMTN-223	ENST00000619644	SORL1	Q92673	2214 aa		11.05	□□□□□ -0.64
SMTN-223	ENST00000619644	NPFF	O15130	113 aa		11.05	□□□□□ -0.64
SMTN-223	ENST00000619644	TRBV12-3	P01733	135 aa		11.05	□□□□□ -0.64
SMTN-223	ENST00000619644	ARL3	P36405	182 aa		11.05	□□□□□ -0.64
SMTN-223	ENST00000619644	PRR9	Q5T870	116 aa		11.04	□□□□□ -0.64
SMTN-223	ENST00000619644	PGPEP1	Q9NXJ5	209 aa		11.04	□□□□□ -0.64
SMTN-223	ENST00000619644	CENPVL3	A0A0U1RRI6	287 aa		11.04	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 156.3 ms