RNA–Protein interactions for RNA: ENST00000619138.4

CNTNAP3B-215, Transcript of contactin associated protein like 3B, human

TSL 1 (best)

Gene CNTNAP3B, Length 3,840 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNTNAP3B-215	ENST00000619138	IGLV3-9	A0A075B6K5	115 aa		10.71	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	TRGV3	P03979	118 aa		10.71	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	IGHV1-8	P0DP01	117 aa		10.71	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138		Q6AWC8	147 aa		10.71	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138		A0A0U1RRA0	63 aa		10.7	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	MT-ATP8	P03928	68 aa		10.7	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	ZNF491	Q8N8L2	437 aa		10.7	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	TIMM23	O14925	209 aa		10.7	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	ECSCR	Q19T08	205 aa		10.7	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	NUP37	Q8NFH4	326 aa		10.7	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	IGHV1-3	A0A0C4DH29	117 aa		10.69	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138		A0A1B0GW15	77 aa		10.69	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	ZNF815P	A8K554	130 aa		10.69	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	SCGB3A1	Q96QR1	104 aa		10.69	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	PRR25	Q96S07	402 aa		10.69	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	WI2-2373I1.2	A0A1W2PRP0	233 aa		10.69	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	SHISA9	B4DS77	424 aa		10.69	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	FAM74A4	Q5TZK3	123 aa		10.69	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	DTX2	Q86UW9	622 aa		10.69	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	TRAV12-3	A0A0B4J271	114 aa		10.69	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138		F8W1H4	67 aa		10.69	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	KLHL30-AS1	Q8NEE0	82 aa		10.69	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	KLRD1	Q13241	179 aa		10.68	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	TMEM155	Q4W5P6	130 aa		10.68	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		10.68	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138		Q6ZQT7	251 aa		10.68	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	SIVA1	O15304	175 aa		10.68	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	IGKV3-20	P01619	116 aa		10.68	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	ZFP2	Q6ZN57	461 aa		10.68	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	IL17REL	Q6ZVW7	336 aa		10.68	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	PRAC2	D3DTV9	90 aa		10.68	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	LOX	P28300	417 aa	Predicted RBP	10.68	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	TMEM95	Q3KNT9	176 aa		10.68	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	USP24	Q9UPU5	2620 aa		10.68	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	FCN3	O75636	299 aa		10.67	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	RAI1	Q7Z5J4	1906 aa	Predicted RBP	10.67	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	PRSS29P	A6NIE9	313 aa		10.67	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	GATA3	P23771	443 aa		10.67	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	FABP5P3	A8MUU1	101 aa		10.67	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	CRYGC	P07315	174 aa		10.67	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	NXT2	Q9NPJ8	142 aa	Known RBP	10.67	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	HHLA3	Q9XRX5	114 aa		10.67	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138		B9A039	149 aa		10.66	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	GAGE2B	Q13066	116 aa		10.66	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	GAGE2E	Q4V326	116 aa		10.66	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	RNF183	Q96D59	192 aa		10.66	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	GAGE2D	Q9UEU5	116 aa		10.66	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	ITPR1	Q14643	2758 aa		10.66	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138		H3BRN7	92 aa		10.66	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	TMEM178B	H3BS89	294 aa		10.66	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	RRN3P1	Q2M238	152 aa		10.66	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	LINC00527	Q9UJ94	153 aa		10.66	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	IGSF10	Q6WRI0	2623 aa		10.66	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138		I3L2K1	104 aa		10.66	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	ZFAND6	Q6FIF0	208 aa		10.66	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	MRAP2	Q96G30	205 aa		10.66	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	LINC01548	A6NM66	108 aa		10.65	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	TEX22	C9J3V5	150 aa		10.65	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138		E9PLD3	99 aa		10.65	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138		K7EIM0	57 aa		10.65	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	MFAP4	P55083	255 aa		10.65	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	DYNAP	Q8N1N2	210 aa		10.65	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	TIMD4	Q96H15	378 aa		10.65	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	KIR2DL4	Q99706	377 aa		10.65	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	ATP5L	O75964	103 aa		10.65	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	DLX6	P56179	175 aa		10.65	□□□□□ -0.7
CNTNAP3B-215	ENST00000619138	TRAV2	A0A0B4J234	112 aa		10.65	□□□□□ -0.71
CNTNAP3B-215	ENST00000619138		C9JAW5	83 aa		10.65	□□□□□ -0.71
CNTNAP3B-215	ENST00000619138	SLC25A16	P16260	332 aa		10.65	□□□□□ -0.71
CNTNAP3B-215	ENST00000619138	CFHR4	Q92496	578 aa		10.65	□□□□□ -0.71
CNTNAP3B-215	ENST00000619138	C21orf62	Q9NYP8	219 aa		10.65	□□□□□ -0.71
CNTNAP3B-215	ENST00000619138	IGKV3D-20	A0A0C4DH25	116 aa		10.64	□□□□□ -0.71
CNTNAP3B-215	ENST00000619138	DEFB1	P60022	68 aa		10.64	□□□□□ -0.71
CNTNAP3B-215	ENST00000619138	LAGE3	Q14657	143 aa		10.64	□□□□□ -0.71
CNTNAP3B-215	ENST00000619138	C8orf86	Q6ZUL3	223 aa		10.64	□□□□□ -0.71
CNTNAP3B-215	ENST00000619138	BSN	Q9UPA5	3926 aa		10.64	□□□□□ -0.71
CNTNAP3B-215	ENST00000619138	NDP	Q00604	133 aa		10.64	□□□□□ -0.71
CNTNAP3B-215	ENST00000619138	ZNF48	Q96MX3	618 aa	Predicted RBP	10.64	□□□□□ -0.71
CNTNAP3B-215	ENST00000619138	GATA4	P43694	442 aa		10.64	□□□□□ -0.71
CNTNAP3B-215	ENST00000619138	CITED1	Q99966	193 aa		10.64	□□□□□ -0.71
CNTNAP3B-215	ENST00000619138	TMEM14C	Q9P0S9	112 aa		10.64	□□□□□ -0.71
CNTNAP3B-215	ENST00000619138	TMEM238L	A0A1B0GVL6	79 aa		10.63	□□□□□ -0.71
CNTNAP3B-215	ENST00000619138		A6NJY4	79 aa		10.63	□□□□□ -0.71
CNTNAP3B-215	ENST00000619138		A8MWV9	139 aa		10.63	□□□□□ -0.71
CNTNAP3B-215	ENST00000619138	RPL13A	P40429	203 aa	Known RBP	10.63	□□□□□ -0.71
CNTNAP3B-215	ENST00000619138	RAB1B	Q9H0U4	201 aa		10.63	□□□□□ -0.71
CNTNAP3B-215	ENST00000619138	ZNF256	Q9Y2P7	627 aa	Predicted RBP	10.63	□□□□□ -0.71
CNTNAP3B-215	ENST00000619138	C19orf84	I3L1E1	186 aa		10.63	□□□□□ -0.71
CNTNAP3B-215	ENST00000619138	RS1	O15537	224 aa		10.63	□□□□□ -0.71
CNTNAP3B-215	ENST00000619138	HERVK_113	P61574	105 aa		10.63	□□□□□ -0.71
CNTNAP3B-215	ENST00000619138	TMEM78	Q5T7P6	136 aa		10.63	□□□□□ -0.71
CNTNAP3B-215	ENST00000619138	ZNF493	Q6ZR52	646 aa		10.63	□□□□□ -0.71
CNTNAP3B-215	ENST00000619138	ZNF672	Q499Z4	452 aa	Predicted RBP	10.62	□□□□□ -0.71
CNTNAP3B-215	ENST00000619138	PRADC1	Q9BSG0	188 aa		10.62	□□□□□ -0.71
CNTNAP3B-215	ENST00000619138	LRBA	P50851	2863 aa		10.62	□□□□□ -0.71
CNTNAP3B-215	ENST00000619138	BUB1B-PAK6	H3BSN5	160 aa		10.62	□□□□□ -0.71
CNTNAP3B-215	ENST00000619138	FOXI1	Q12951	378 aa		10.62	□□□□□ -0.71
CNTNAP3B-215	ENST00000619138	C14orf178	Q8N769	122 aa	Predicted RBP	10.62	□□□□□ -0.71
CNTNAP3B-215	ENST00000619138	ITLN2	Q8WWU7	325 aa	Predicted RBP	10.62	□□□□□ -0.71
CNTNAP3B-215	ENST00000619138	DLX4	Q92988	240 aa	Predicted RBP	10.62	□□□□□ -0.71

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