RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 VMO1Q7Z5L0 202 aa5.45□□□□□ -1.54
SRGAP3-213ENST00000618999 LY6G5BQ8NDX9 201 aa5.45□□□□□ -1.54
SRGAP3-213ENST00000618999 RNF5Q99942 180 aa5.45□□□□□ -1.54
SRGAP3-213ENST00000618999 SPATA25Q9BR10 227 aa5.45□□□□□ -1.54
SRGAP3-213ENST00000618999 TACC2O95359 2948 aa5.45□□□□□ -1.54
SRGAP3-213ENST00000618999 I3L2K1 104 aa5.45□□□□□ -1.54
SRGAP3-213ENST00000618999 TIMM23O14925 209 aa5.45□□□□□ -1.54
SRGAP3-213ENST00000618999 IGLV2-11P01706 119 aa5.45□□□□□ -1.54
SRGAP3-213ENST00000618999 LMO4P61968 165 aa5.45□□□□□ -1.54
SRGAP3-213ENST00000618999 KLF17Q5JT82 389 aaPredicted RBP5.45□□□□□ -1.54
SRGAP3-213ENST00000618999 ADAMTSL5Q6ZMM2 481 aa5.45□□□□□ -1.54
SRGAP3-213ENST00000618999 ZNF491Q8N8L2 437 aa5.45□□□□□ -1.54
SRGAP3-213ENST00000618999 UTP20O75691 2785 aaKnown RBP5.45□□□□□ -1.54
SRGAP3-213ENST00000618999 CRYBG3Q68DQ2 2970 aa5.44□□□□□ -1.54
SRGAP3-213ENST00000618999 IGHV4-30-2A0A087WSY4 118 aa5.44□□□□□ -1.54
SRGAP3-213ENST00000618999 OR11H12B2RN74 326 aa5.44□□□□□ -1.54
SRGAP3-213ENST00000618999 USP17L23D6RBM5 183 aa5.44□□□□□ -1.54
SRGAP3-213ENST00000618999 IGLV1-47P01700 117 aa5.44□□□□□ -1.54
SRGAP3-213ENST00000618999 IGHV3-23P01764 117 aa5.44□□□□□ -1.54
SRGAP3-213ENST00000618999 SCGB1D4Q6XE38 83 aa5.44□□□□□ -1.54
SRGAP3-213ENST00000618999 OR11H1Q8NG94 326 aa5.44□□□□□ -1.54
SRGAP3-213ENST00000618999 OR11H2Q8NH07 326 aa5.44□□□□□ -1.54
SRGAP3-213ENST00000618999 IGFBPL1Q8WX77 278 aa5.44□□□□□ -1.54
SRGAP3-213ENST00000618999 CCDC168Q8NDH2 2452 aa5.44□□□□□ -1.54
SRGAP3-213ENST00000618999 IGHV3OR16-10A0A075B7F0 116 aa5.44□□□□□ -1.54
SRGAP3-213ENST00000618999 IGHV3-35A0A0C4DH35 117 aa5.44□□□□□ -1.54
SRGAP3-213ENST00000618999 PPIFP30405 207 aaKnown RBP5.44□□□□□ -1.54
SRGAP3-213ENST00000618999 TMEM78Q5T7P6 136 aa5.44□□□□□ -1.54
SRGAP3-213ENST00000618999 C10orf105Q8TEF2 133 aa5.44□□□□□ -1.54
SRGAP3-213ENST00000618999 TMEM158Q8WZ71 300 aa5.44□□□□□ -1.54
SRGAP3-213ENST00000618999 PLXNB1O43157 2135 aa5.44□□□□□ -1.54
SRGAP3-213ENST00000618999 CREBBPQ92793 2442 aa5.44□□□□□ -1.54
SRGAP3-213ENST00000618999 S100A4P26447 101 aaKnown RBP5.44□□□□□ -1.54
SRGAP3-213ENST00000618999 RUSC1-AS1Q66K80 236 aa5.44□□□□□ -1.54
SRGAP3-213ENST00000618999 UFSP1Q6NVU6 142 aa5.44□□□□□ -1.54
SRGAP3-213ENST00000618999 VGLL1Q99990 258 aa5.44□□□□□ -1.54
SRGAP3-213ENST00000618999 TEX48A0A1B0GUV7 120 aa5.43□□□□□ -1.54
SRGAP3-213ENST00000618999 B5MCH6 92 aa5.43□□□□□ -1.54
SRGAP3-213ENST00000618999 K7ERJ3 54 aa5.43□□□□□ -1.54
SRGAP3-213ENST00000618999 TRIAP1O43715 76 aa5.43□□□□□ -1.54
SRGAP3-213ENST00000618999 FGF6P10767 208 aa5.43□□□□□ -1.54
SRGAP3-213ENST00000618999 LYRM7Q5U5X0 104 aa5.43□□□□□ -1.54
SRGAP3-213ENST00000618999 ARPC1AQ92747 370 aa5.43□□□□□ -1.54
SRGAP3-213ENST00000618999 FASNP49327 2511 aaKnown RBP5.43□□□□□ -1.54
SRGAP3-213ENST00000618999 CSPG4Q6UVK1 2322 aa5.43□□□□□ -1.54
SRGAP3-213ENST00000618999 ASH1LQ9NR48 2969 aaKnown RBP5.43□□□□□ -1.54
SRGAP3-213ENST00000618999 IGHV3OR16-8A0A075B7F1 116 aa5.43□□□□□ -1.54
SRGAP3-213ENST00000618999 NDUFA3O95167 84 aa5.43□□□□□ -1.54
SRGAP3-213ENST00000618999 PLA2G2AP14555 144 aa5.43□□□□□ -1.54
SRGAP3-213ENST00000618999 KRTAP10-9P60411 292 aa5.43□□□□□ -1.54
SRGAP3-213ENST00000618999 SRSF9Q13242 221 aaKnown RBP eCLIP5.43□□□□□ -1.54
SRGAP3-213ENST00000618999 FHL3Q13643 280 aa5.43□□□□□ -1.54
SRGAP3-213ENST00000618999 ZNF562Q6V9R5 426 aa5.43□□□□□ -1.54
SRGAP3-213ENST00000618999 NOTCH2Q04721 2471 aa5.43□□□□□ -1.54
SRGAP3-213ENST00000618999 A0A1B0GWB2 263 aa5.43□□□□□ -1.54
SRGAP3-213ENST00000618999 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.43□□□□□ -1.54
SRGAP3-213ENST00000618999 K7EIM0 57 aa5.43□□□□□ -1.54
SRGAP3-213ENST00000618999 EGR2P11161 476 aaPredicted RBP5.43□□□□□ -1.54
SRGAP3-213ENST00000618999 RAB9AP51151 201 aa5.43□□□□□ -1.54
SRGAP3-213ENST00000618999 FXYD2P54710 66 aa5.43□□□□□ -1.54
SRGAP3-213ENST00000618999 GAGE13Q4V321 117 aa5.43□□□□□ -1.54
SRGAP3-213ENST00000618999 CRIP1P50238 77 aa5.42□□□□□ -1.54
SRGAP3-213ENST00000618999 IGFL4Q6B9Z1 124 aa5.42□□□□□ -1.54
SRGAP3-213ENST00000618999 GATD1Q8NB37 220 aa5.42□□□□□ -1.54
SRGAP3-213ENST00000618999 MAPK1IP1LQ8NDC0 245 aa5.42□□□□□ -1.54
SRGAP3-213ENST00000618999 KLK15Q9H2R5 256 aa5.42□□□□□ -1.54
SRGAP3-213ENST00000618999 HIGD1BQ9P298 99 aa5.42□□□□□ -1.54
SRGAP3-213ENST00000618999 NOTCH3Q9UM47 2321 aa5.42□□□□□ -1.54
SRGAP3-213ENST00000618999 TRAV40A0A0B4J280 105 aa5.42□□□□□ -1.54
SRGAP3-213ENST00000618999 F8W1H4 67 aa5.42□□□□□ -1.54
SRGAP3-213ENST00000618999 LAGE3Q14657 143 aa5.42□□□□□ -1.54
SRGAP3-213ENST00000618999 CEND1Q8N111 149 aa5.42□□□□□ -1.54
SRGAP3-213ENST00000618999 OR11H6Q8NGC7 330 aa5.42□□□□□ -1.54
SRGAP3-213ENST00000618999 TSSC4Q9Y5U2 329 aaPredicted RBP5.42□□□□□ -1.54
SRGAP3-213ENST00000618999 HELZ2Q9BYK8 2649 aaKnown RBP5.42□□□□□ -1.54
SRGAP3-213ENST00000618999 TRBV25-1A0A075B6N4 114 aa5.42□□□□□ -1.54
SRGAP3-213ENST00000618999 A0A0U1RRA0 63 aa5.42□□□□□ -1.54
SRGAP3-213ENST00000618999 AZU1P20160 251 aa5.42□□□□□ -1.54
SRGAP3-213ENST00000618999 DSCR9P59020 149 aa5.42□□□□□ -1.54
SRGAP3-213ENST00000618999 TTTY13Q9BZ97 58 aa5.42□□□□□ -1.54
SRGAP3-213ENST00000618999 U3KQK5 164 aa5.42□□□□□ -1.54
SRGAP3-213ENST00000618999 ANKRD17O75179 2603 aaKnown RBP5.42□□□□□ -1.54
SRGAP3-213ENST00000618999 TRGV11A0A075B6L2 103 aa5.42□□□□□ -1.54
SRGAP3-213ENST00000618999 LOC107984156A0A0G2JMH3 177 aa5.42□□□□□ -1.54
SRGAP3-213ENST00000618999 PLNP26678 52 aa5.42□□□□□ -1.54
SRGAP3-213ENST00000618999 ANXA2RQ3ZCQ2 193 aa5.42□□□□□ -1.54
SRGAP3-213ENST00000618999 C19orf54Q5BKX5 351 aa5.42□□□□□ -1.54
SRGAP3-213ENST00000618999 Q71RC1 249 aaPredicted RBP5.42□□□□□ -1.54
SRGAP3-213ENST00000618999 NEGR1Q7Z3B1 354 aa5.42□□□□□ -1.54
SRGAP3-213ENST00000618999 ARL17AQ8IVW1 177 aa5.42□□□□□ -1.54
SRGAP3-213ENST00000618999 MRPL16Q9NX20 251 aaKnown RBP5.42□□□□□ -1.54
SRGAP3-213ENST00000618999 HOXB4P17483 251 aaPredicted RBP5.41□□□□□ -1.54
SRGAP3-213ENST00000618999 ECSCRQ19T08 205 aa5.41□□□□□ -1.54
SRGAP3-213ENST00000618999 ETDBQ3ZM63 59 aa5.41□□□□□ -1.54
SRGAP3-213ENST00000618999 Q8N8P6 123 aa5.41□□□□□ -1.54
SRGAP3-213ENST00000618999 SCGB3A1Q96QR1 104 aa5.41□□□□□ -1.54
SRGAP3-213ENST00000618999 GAGE12HA6NDE8 117 aa5.41□□□□□ -1.54
SRGAP3-213ENST00000618999 C5orf64Q2M2E5 130 aa5.41□□□□□ -1.54
SRGAP3-213ENST00000618999 MRPL35Q9NZE8 188 aaKnown RBP5.41□□□□□ -1.54
SRGAP3-213ENST00000618999 MSRB1Q9NZV6 116 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms