RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 SOCS3O14543 225 aa3.28□□□□□ -1.88
SEC22B-202ENST00000618538 NPFFO15130 113 aa3.28□□□□□ -1.88
SEC22B-202ENST00000618538 CD5LO43866 347 aa3.28□□□□□ -1.88
SEC22B-202ENST00000618538 BMI1P35226 326 aa3.28□□□□□ -1.88
SEC22B-202ENST00000618538 LEPP41159 167 aa3.28□□□□□ -1.88
SEC22B-202ENST00000618538 EFNA4P52798 201 aa3.28□□□□□ -1.88
SEC22B-202ENST00000618538 RPS20P60866 119 aaKnown RBP3.28□□□□□ -1.88
SEC22B-202ENST00000618538 NHLH1Q02575 133 aa3.28□□□□□ -1.88
SEC22B-202ENST00000618538 VAMP3Q15836 100 aa3.28□□□□□ -1.88
SEC22B-202ENST00000618538 TMEM97Q5BJF2 176 aa3.28□□□□□ -1.88
SEC22B-202ENST00000618538 C12orf54Q6X4T0 127 aa3.28□□□□□ -1.88
SEC22B-202ENST00000618538 BRD3OSQ6XYD6 125 aa3.28□□□□□ -1.88
SEC22B-202ENST00000618538 GLMPQ8WWB7 406 aa3.28□□□□□ -1.88
SEC22B-202ENST00000618538 DPF1Q92782 380 aa3.28□□□□□ -1.88
SEC22B-202ENST00000618538 NPFFR1Q9GZQ6 430 aa3.28□□□□□ -1.88
SEC22B-202ENST00000618538 MXRA5Q9NR99 2828 aa3.28□□□□□ -1.88
SEC22B-202ENST00000618538 CACNA1AO00555 2505 aa3.28□□□□□ -1.89
SEC22B-202ENST00000618538 MYO18BQ8IUG5 2567 aa3.27□□□□□ -1.89
SEC22B-202ENST00000618538 ZFYVE26Q68DK2 2539 aa3.27□□□□□ -1.89
SEC22B-202ENST00000618538 C7orf71A4D174 169 aa3.27□□□□□ -1.89
SEC22B-202ENST00000618538 K7EMI3 77 aa3.27□□□□□ -1.89
SEC22B-202ENST00000618538 IGHV4-38-2P0DP08 117 aa3.27□□□□□ -1.89
SEC22B-202ENST00000618538 FCER1GP30273 86 aa3.27□□□□□ -1.89
SEC22B-202ENST00000618538 UFSP1Q6NVU6 142 aa3.27□□□□□ -1.89
SEC22B-202ENST00000618538 C9orf47Q6ZRZ4 202 aa3.27□□□□□ -1.89
SEC22B-202ENST00000618538 S100A7AQ86SG5 101 aa3.27□□□□□ -1.89
SEC22B-202ENST00000618538 ZFAND2AQ8N6M9 145 aa3.27□□□□□ -1.89
SEC22B-202ENST00000618538 OR4C5Q8NGB2 326 aa3.27□□□□□ -1.89
SEC22B-202ENST00000618538 TMEM158Q8WZ71 300 aa3.27□□□□□ -1.89
SEC22B-202ENST00000618538 SLC50A1Q9BRV3 221 aa3.27□□□□□ -1.89
SEC22B-202ENST00000618538 MAP1LC3AQ9H492 121 aa3.27□□□□□ -1.89
SEC22B-202ENST00000618538 USP9YO00507 2555 aaPredicted RBP3.27□□□□□ -1.89
SEC22B-202ENST00000618538 TRAV41A0A0B4J266 112 aa3.27□□□□□ -1.89
SEC22B-202ENST00000618538 IGHV4-61A0A0C4DH41 118 aa3.27□□□□□ -1.89
SEC22B-202ENST00000618538 F6UB75 175 aa3.27□□□□□ -1.89
SEC22B-202ENST00000618538 H3BVH4 76 aa3.27□□□□□ -1.89
SEC22B-202ENST00000618538 J3KRW8 73 aa3.27□□□□□ -1.89
SEC22B-202ENST00000618538 GOSR1O95249 250 aa3.27□□□□□ -1.89
SEC22B-202ENST00000618538 NMUP48645 174 aa3.27□□□□□ -1.89
SEC22B-202ENST00000618538 OR1N2Q8NGR9 330 aa3.27□□□□□ -1.89
SEC22B-202ENST00000618538 OR2K2Q8NGT1 345 aa3.27□□□□□ -1.89
SEC22B-202ENST00000618538 EEF1AKMT3Q96AZ1 226 aa3.27□□□□□ -1.89
SEC22B-202ENST00000618538 KLK15Q9H2R5 256 aa3.27□□□□□ -1.89
SEC22B-202ENST00000618538 IGHV4-4A0A075B6R2 117 aa3.26□□□□□ -1.89
SEC22B-202ENST00000618538 TRBV7-1A0A0A6YYK4 115 aa3.26□□□□□ -1.89
SEC22B-202ENST00000618538 TRAV40A0A0B4J280 105 aa3.26□□□□□ -1.89
SEC22B-202ENST00000618538 PPBPP02775 128 aa3.26□□□□□ -1.89
SEC22B-202ENST00000618538 CRIP2P52943 208 aaPredicted RBP3.26□□□□□ -1.89
SEC22B-202ENST00000618538 FXYD2P54710 66 aa3.26□□□□□ -1.89
SEC22B-202ENST00000618538 UCNP55089 124 aa3.26□□□□□ -1.89
SEC22B-202ENST00000618538 KRTAP1-1Q07627 177 aa3.26□□□□□ -1.89
SEC22B-202ENST00000618538 MAPKAPK5-AS1Q8N8E1 139 aa3.26□□□□□ -1.89
SEC22B-202ENST00000618538 Q8N8P6 123 aa3.26□□□□□ -1.89
SEC22B-202ENST00000618538 MRPL53Q96EL3 112 aaKnown RBP3.26□□□□□ -1.89
SEC22B-202ENST00000618538 METTL26Q96S19 204 aa3.26□□□□□ -1.89
SEC22B-202ENST00000618538 FOXC2Q99958 501 aa3.26□□□□□ -1.89
SEC22B-202ENST00000618538 CST9LQ9H4G1 147 aa3.26□□□□□ -1.89
SEC22B-202ENST00000618538 CSPG4Q6UVK1 2322 aa3.26□□□□□ -1.89
SEC22B-202ENST00000618538 MUC4Q99102 2169 aa3.26□□□□□ -1.89
SEC22B-202ENST00000618538 A1L4Q6 167 aa3.25□□□□□ -1.89
SEC22B-202ENST00000618538 PRSS47A8MTI9 375 aa3.25□□□□□ -1.89
SEC22B-202ENST00000618538 K7ERJ3 54 aa3.25□□□□□ -1.89
SEC22B-202ENST00000618538 SAP30O75446 220 aa3.25□□□□□ -1.89
SEC22B-202ENST00000618538 IGHV3-11P01762 117 aa3.25□□□□□ -1.89
SEC22B-202ENST00000618538 RNASE1P07998 156 aaKnown RBP3.25□□□□□ -1.89
SEC22B-202ENST00000618538 SMIM17P0DL12 118 aa3.25□□□□□ -1.89
SEC22B-202ENST00000618538 GNLYP22749 145 aa3.25□□□□□ -1.89
SEC22B-202ENST00000618538 CDKN1BP46527 198 aa3.25□□□□□ -1.89
SEC22B-202ENST00000618538 RAB9AP51151 201 aa3.25□□□□□ -1.89
SEC22B-202ENST00000618538 SEC11AP67812 179 aa3.25□□□□□ -1.89
SEC22B-202ENST00000618538 ATP5G2Q06055 141 aa3.25□□□□□ -1.89
SEC22B-202ENST00000618538 HSD52Q0P140 79 aa3.25□□□□□ -1.89
SEC22B-202ENST00000618538 LY6EQ16553 131 aa3.25□□□□□ -1.89
SEC22B-202ENST00000618538 OCIAD2Q56VL3 154 aa3.25□□□□□ -1.89
SEC22B-202ENST00000618538 TMEM78Q5T7P6 136 aa3.25□□□□□ -1.89
SEC22B-202ENST00000618538 GTSCR1Q86UQ5 136 aa3.25□□□□□ -1.89
SEC22B-202ENST00000618538 PHLDA1Q8WV24 401 aaPredicted RBP3.25□□□□□ -1.89
SEC22B-202ENST00000618538 RASL10AQ92737 203 aa3.25□□□□□ -1.89
SEC22B-202ENST00000618538 FAM19A4Q96LR4 140 aa3.25□□□□□ -1.89
SEC22B-202ENST00000618538 NXT2Q9NPJ8 142 aaKnown RBP3.25□□□□□ -1.89
SEC22B-202ENST00000618538 MRPL35Q9NZE8 188 aaKnown RBP3.25□□□□□ -1.89
SEC22B-202ENST00000618538 MOB4Q9Y3A3 225 aa3.25□□□□□ -1.89
SEC22B-202ENST00000618538 UFC1Q9Y3C8 167 aa3.25□□□□□ -1.89
SEC22B-202ENST00000618538 LRRK2Q5S007 2527 aa3.25□□□□□ -1.89
SEC22B-202ENST00000618538 IGHV1-69DA0A0B4J2H0 117 aa3.25□□□□□ -1.89
SEC22B-202ENST00000618538 TMEM8BA6NDV4 472 aa3.25□□□□□ -1.89
SEC22B-202ENST00000618538 C9orf118A6NHY6 69 aa3.25□□□□□ -1.89
SEC22B-202ENST00000618538 H3BUT2 72 aa3.25□□□□□ -1.89
SEC22B-202ENST00000618538 SCGB2A1O75556 95 aa3.25□□□□□ -1.89
SEC22B-202ENST00000618538 IGHV1-69P01742 117 aa3.25□□□□□ -1.89
SEC22B-202ENST00000618538 ARL3P36405 182 aa3.25□□□□□ -1.89
SEC22B-202ENST00000618538 PCP4P48539 62 aa3.25□□□□□ -1.89
SEC22B-202ENST00000618538 BLCAPP62952 87 aa3.25□□□□□ -1.89
SEC22B-202ENST00000618538 TMEM95Q3KNT9 176 aa3.25□□□□□ -1.89
SEC22B-202ENST00000618538 OR9G4Q8NGQ1 327 aa3.25□□□□□ -1.89
SEC22B-202ENST00000618538 RPL39LQ96EH5 51 aaKnown RBP3.25□□□□□ -1.89
SEC22B-202ENST00000618538 PEF1Q9UBV8 284 aaKnown RBP3.25□□□□□ -1.89
SEC22B-202ENST00000618538 CBY1Q9Y3M2 126 aa3.25□□□□□ -1.89
SEC22B-202ENST00000618538 TRBV25-1A0A075B6N4 114 aa3.24□□□□□ -1.89
SEC22B-202ENST00000618538 GAGE12BA1L429 117 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms