RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 TMUB2Q71RG4 321 aa11.17□□□□□ -0.62
BRCA1-228ENST00000618469 STOML3Q8TAV4 291 aa11.17□□□□□ -0.62
BRCA1-228ENST00000618469 FAM213BQ8TBF2 198 aa11.17□□□□□ -0.62
BRCA1-228ENST00000618469 C18orf15Q96N68 181 aa11.17□□□□□ -0.62
BRCA1-228ENST00000618469 IGLV2-18A0A075B6J9 118 aa11.16□□□□□ -0.62
BRCA1-228ENST00000618469 GCGP01275 180 aa11.16□□□□□ -0.62
BRCA1-228ENST00000618469 IGHV3-53P01767 116 aa11.16□□□□□ -0.62
BRCA1-228ENST00000618469 EIF5AP63241 154 aaKnown RBP11.16□□□□□ -0.62
BRCA1-228ENST00000618469 LGALS9BQ3B8N2 356 aa11.16□□□□□ -0.62
BRCA1-228ENST00000618469 TDRG1Q3Y452 100 aa11.16□□□□□ -0.62
BRCA1-228ENST00000618469 FAT2Q9NYQ8 4349 aa11.15□□□□□ -0.62
BRCA1-228ENST00000618469 hCG_2014768A0A024R1R8 64 aa11.15□□□□□ -0.62
BRCA1-228ENST00000618469 TRAV34A0A0B4J273 112 aa11.15□□□□□ -0.62
BRCA1-228ENST00000618469 A0A1B0GV50 99 aa11.15□□□□□ -0.62
BRCA1-228ENST00000618469 FBLL1A6NHQ2 334 aaKnown RBP11.15□□□□□ -0.62
BRCA1-228ENST00000618469 UMAD1C9J7I0 102 aa11.15□□□□□ -0.62
BRCA1-228ENST00000618469 M0R2N4 97 aa11.15□□□□□ -0.62
BRCA1-228ENST00000618469 TYMSP04818 313 aa11.15□□□□□ -0.62
BRCA1-228ENST00000618469 TPT1P13693 172 aaKnown RBP11.15□□□□□ -0.62
BRCA1-228ENST00000618469 ZNF80P51504 273 aaPredicted RBP11.15□□□□□ -0.62
BRCA1-228ENST00000618469 SMUG1Q53HV7 270 aa11.15□□□□□ -0.62
BRCA1-228ENST00000618469 Q86TA4 180 aa11.15□□□□□ -0.62
BRCA1-228ENST00000618469 TCTE3Q8IZS6 198 aa11.15□□□□□ -0.62
BRCA1-228ENST00000618469 LINC00479Q96M42 142 aa11.15□□□□□ -0.62
BRCA1-228ENST00000618469 NKX6-2Q9C056 277 aaPredicted RBP11.15□□□□□ -0.62
BRCA1-228ENST00000618469 SDF2L1Q9HCN8 221 aa11.15□□□□□ -0.62
BRCA1-228ENST00000618469 DNAH2Q9P225 4427 aa11.15□□□□□ -0.63
BRCA1-228ENST00000618469 IGHV3-16A0A0C4DH30 117 aa11.14□□□□□ -0.63
BRCA1-228ENST00000618469 PPT1P50897 306 aa11.14□□□□□ -0.63
BRCA1-228ENST00000618469 KCNS1Q96KK3 526 aa11.14□□□□□ -0.63
BRCA1-228ENST00000618469 SPXQ9BT56 116 aa11.14□□□□□ -0.63
BRCA1-228ENST00000618469 ARL2-SNX15V9GYD0 113 aa11.14□□□□□ -0.63
BRCA1-228ENST00000618469 GNRH2O43555 120 aa11.13□□□□□ -0.63
BRCA1-228ENST00000618469 PFN1P07737 140 aaKnown RBP11.13□□□□□ -0.63
BRCA1-228ENST00000618469 CCL18P55774 89 aa11.13□□□□□ -0.63
BRCA1-228ENST00000618469 CST9LP1Q5W188 147 aa11.13□□□□□ -0.63
BRCA1-228ENST00000618469 SFT2D1Q8WV19 159 aa11.13□□□□□ -0.63
BRCA1-228ENST00000618469 HIST1H2BAQ96A08 127 aa11.13□□□□□ -0.63
BRCA1-228ENST00000618469 PRSS29PA6NIE9 313 aa11.12□□□□□ -0.63
BRCA1-228ENST00000618469 FAM3BP58499 235 aaPredicted RBP11.12□□□□□ -0.63
BRCA1-228ENST00000618469 SAPCD1Q5SSQ6 148 aa11.12□□□□□ -0.63
BRCA1-228ENST00000618469 DPPA3Q6W0C5 159 aa11.12□□□□□ -0.63
BRCA1-228ENST00000618469 C11orf21Q9P2W6 132 aa11.12□□□□□ -0.63
BRCA1-228ENST00000618469 A0A1B0GVG6 124 aa11.11□□□□□ -0.63
BRCA1-228ENST00000618469 H3BNG1 76 aa11.11□□□□□ -0.63
BRCA1-228ENST00000618469 UBE2G1P62253 170 aa11.11□□□□□ -0.63
BRCA1-228ENST00000618469 LINC00336Q6ZUF6 198 aa11.11□□□□□ -0.63
BRCA1-228ENST00000618469 MBD3L1Q8WWY6 194 aa11.11□□□□□ -0.63
BRCA1-228ENST00000618469 VSIG2Q96IQ7 327 aa11.11□□□□□ -0.63
BRCA1-228ENST00000618469 TCEAL7Q9BRU2 100 aa11.11□□□□□ -0.63
BRCA1-228ENST00000618469 LINC00588Q9Y4M8 146 aa11.11□□□□□ -0.63
BRCA1-228ENST00000618469 M0R2P5 195 aa11.1□□□□□ -0.63
BRCA1-228ENST00000618469 PAGE4O60829 102 aa11.1□□□□□ -0.63
BRCA1-228ENST00000618469 C1QBP02746 253 aa11.1□□□□□ -0.63
BRCA1-228ENST00000618469 H2AFB1P0C5Y9 115 aa11.1□□□□□ -0.63
BRCA1-228ENST00000618469 SFTA3P0C7M3 94 aa11.1□□□□□ -0.63
BRCA1-228ENST00000618469 AKR1C3P42330 323 aa11.1□□□□□ -0.63
BRCA1-228ENST00000618469 LGALSLQ3ZCW2 172 aaPredicted RBP11.1□□□□□ -0.63
BRCA1-228ENST00000618469 AKAP14Q86UN6 197 aa11.1□□□□□ -0.63
BRCA1-228ENST00000618469 RASL10AQ92737 203 aa11.1□□□□□ -0.63
BRCA1-228ENST00000618469 DYNC1H1Q14204 4646 aaKnown RBP11.1□□□□□ -0.63
BRCA1-228ENST00000618469 TRGV4A0A0C4DH28 118 aa11.09□□□□□ -0.63
BRCA1-228ENST00000618469 PAX4O43316 350 aa11.09□□□□□ -0.63
BRCA1-228ENST00000618469 ZNF575Q86XF7 245 aa11.09□□□□□ -0.63
BRCA1-228ENST00000618469 ZNRF2Q8NHG8 242 aa11.09□□□□□ -0.63
BRCA1-228ENST00000618469 FMC1Q96HJ9 113 aa11.09□□□□□ -0.63
BRCA1-228ENST00000618469 ZNF479Q96JC4 524 aa11.09□□□□□ -0.63
BRCA1-228ENST00000618469 PRO0255Q9UI72 69 aa11.09□□□□□ -0.63
BRCA1-228ENST00000618469 DNAH17Q9UFH2 4485 aa11.09□□□□□ -0.63
BRCA1-228ENST00000618469 A0A096LPF7 62 aa11.08□□□□□ -0.64
BRCA1-228ENST00000618469 RTL8CO15255 209 aa11.08□□□□□ -0.64
BRCA1-228ENST00000618469 FHL2Q14192 279 aa11.08□□□□□ -0.64
BRCA1-228ENST00000618469 Q6ZR54 194 aa11.08□□□□□ -0.64
BRCA1-228ENST00000618469 ICOSQ9Y6W8 199 aa11.08□□□□□ -0.64
BRCA1-228ENST00000618469 TRAV4A0A0B4J268 109 aa11.07□□□□□ -0.64
BRCA1-228ENST00000618469 C9JCJ5 164 aa11.07□□□□□ -0.64
BRCA1-228ENST00000618469 CRYBA4P53673 196 aa11.07□□□□□ -0.64
BRCA1-228ENST00000618469 EIF5AL1Q6IS14 154 aaKnown RBP11.07□□□□□ -0.64
BRCA1-228ENST00000618469 OR4C5Q8NGB2 326 aa11.07□□□□□ -0.64
BRCA1-228ENST00000618469 ZC2HC1AQ96GY0 325 aa11.07□□□□□ -0.64
BRCA1-228ENST00000618469 SCO2A0A1W2PP80 73 aa11.06□□□□□ -0.64
BRCA1-228ENST00000618469 SLAQ13239 276 aa11.06□□□□□ -0.64
BRCA1-228ENST00000618469 ESRGQ1W209 222 aa11.06□□□□□ -0.64
BRCA1-228ENST00000618469 C9orf85Q96MD7 179 aa11.06□□□□□ -0.64
BRCA1-228ENST00000618469 HHLA3Q9XRX5 114 aa11.06□□□□□ -0.64
BRCA1-228ENST00000618469 ZFP30Q9Y2G7 519 aa11.06□□□□□ -0.64
BRCA1-228ENST00000618469 PKD1P98161 4303 aa11.06□□□□□ -0.64
BRCA1-228ENST00000618469 IGKV3D-20A0A0C4DH25 116 aa11.05□□□□□ -0.64
BRCA1-228ENST00000618469 TRBV6-1A0A0K0K1D8 114 aa11.05□□□□□ -0.64
BRCA1-228ENST00000618469 NBDYA0A0U1RRE5 68 aa11.05□□□□□ -0.64
BRCA1-228ENST00000618469 FABP5P3A8MUU1 101 aa11.05□□□□□ -0.64
BRCA1-228ENST00000618469 SH2D1AO60880 128 aa11.05□□□□□ -0.64
BRCA1-228ENST00000618469 LTAP01374 205 aa11.05□□□□□ -0.64
BRCA1-228ENST00000618469 RAB5CP51148 216 aa11.05□□□□□ -0.64
BRCA1-228ENST00000618469 ZNF876PQ49A33 203 aa11.05□□□□□ -0.64
BRCA1-228ENST00000618469 SLC51BQ86UW2 128 aa11.05□□□□□ -0.64
BRCA1-228ENST00000618469 PCNPQ8WW12 178 aaKnown RBP11.05□□□□□ -0.64
BRCA1-228ENST00000618469 MRPS16Q9Y3D3 137 aaKnown RBP11.05□□□□□ -0.64
BRCA1-228ENST00000618469 B4DEV8 164 aa11.04□□□□□ -0.64
BRCA1-228ENST00000618469 M0R036 132 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms