RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 ZNF575Q86XF7 245 aa9.45□□□□□ -0.9
CIITA-212ENST00000618207 GPHB5Q86YW7 130 aa9.45□□□□□ -0.9
CIITA-212ENST00000618207 USMG5Q96IX5 58 aa9.45□□□□□ -0.9
CIITA-212ENST00000618207 NOTCH2Q04721 2471 aa9.45□□□□□ -0.9
CIITA-212ENST00000618207 GAS8-AS1O95177 125 aa9.45□□□□□ -0.9
CIITA-212ENST00000618207 LEPROTL1O95214 131 aa9.45□□□□□ -0.9
CIITA-212ENST00000618207 GATA3P23771 443 aa9.45□□□□□ -0.9
CIITA-212ENST00000618207 IFI27P40305 119 aaPredicted RBP9.45□□□□□ -0.9
CIITA-212ENST00000618207 KIR3DS1Q14943 382 aa9.45□□□□□ -0.9
CIITA-212ENST00000618207 IGKV3D-20A0A0C4DH25 116 aa9.44□□□□□ -0.9
CIITA-212ENST00000618207 IGHV4-31P0DP07 118 aa9.44□□□□□ -0.9
CIITA-212ENST00000618207 HIST1H1AQ02539 215 aaPredicted RBP9.44□□□□□ -0.9
CIITA-212ENST00000618207 Q6AWC8 147 aa9.44□□□□□ -0.9
CIITA-212ENST00000618207 A0A0G2JLM5 398 aa9.44□□□□□ -0.9
CIITA-212ENST00000618207 HOXA3O43365 443 aaPredicted RBP9.44□□□□□ -0.9
CIITA-212ENST00000618207 IGLV1-40P01703 118 aa9.44□□□□□ -0.9
CIITA-212ENST00000618207 LOXL1Q08397 574 aaPredicted RBP9.44□□□□□ -0.9
CIITA-212ENST00000618207 VAMP3Q15836 100 aa9.44□□□□□ -0.9
CIITA-212ENST00000618207 PRR9Q5T870 116 aa9.44□□□□□ -0.9
CIITA-212ENST00000618207 C2orf70A6NJV1 201 aa9.43□□□□□ -0.9
CIITA-212ENST00000618207 DEFB113Q30KQ7 82 aa9.43□□□□□ -0.9
CIITA-212ENST00000618207 MRPL51Q4U2R6 128 aaKnown RBP9.43□□□□□ -0.9
CIITA-212ENST00000618207 Q6ZVH6 145 aa9.43□□□□□ -0.9
CIITA-212ENST00000618207 PRELID3AQ96N28 172 aa9.43□□□□□ -0.9
CIITA-212ENST00000618207 LAMTOR2Q9Y2Q5 125 aa9.43□□□□□ -0.9
CIITA-212ENST00000618207 CKS2P33552 79 aa9.43□□□□□ -0.9
CIITA-212ENST00000618207 FAM104BQ5XKR9 115 aa9.43□□□□□ -0.9
CIITA-212ENST00000618207 FA2HQ7L5A8 372 aa9.43□□□□□ -0.9
CIITA-212ENST00000618207 SPXQ9BT56 116 aa9.43□□□□□ -0.9
CIITA-212ENST00000618207 AP5S1Q9NUS5 200 aa9.43□□□□□ -0.9
CIITA-212ENST00000618207 PEF1Q9UBV8 284 aaKnown RBP9.43□□□□□ -0.9
CIITA-212ENST00000618207 EVI2AP22794 236 aa9.42□□□□□ -0.9
CIITA-212ENST00000618207 OR10AG1Q8NH19 301 aa9.42□□□□□ -0.9
CIITA-212ENST00000618207 TMEM190Q8WZ59 177 aa9.42□□□□□ -0.9
CIITA-212ENST00000618207 TP73-AS1Q9UF72 201 aa9.42□□□□□ -0.9
CIITA-212ENST00000618207 GATA1P15976 413 aaPredicted RBP9.42□□□□□ -0.9
CIITA-212ENST00000618207 DPF1Q92782 380 aa9.42□□□□□ -0.9
CIITA-212ENST00000618207 IGKV3-20P01619 116 aa9.41□□□□□ -0.9
CIITA-212ENST00000618207 IGLC6P0CF74 106 aa9.41□□□□□ -0.9
CIITA-212ENST00000618207 C9orf139Q6ZV77 190 aa9.41□□□□□ -0.9
CIITA-212ENST00000618207 TMEM70Q9BUB7 260 aa9.41□□□□□ -0.9
CIITA-212ENST00000618207 DAZ1Q9NQZ3 744 aaKnown RBP9.41□□□□□ -0.9
CIITA-212ENST00000618207 UFC1Q9Y3C8 167 aa9.41□□□□□ -0.9
CIITA-212ENST00000618207 NPYP01303 97 aa9.41□□□□□ -0.9
CIITA-212ENST00000618207 ORMDL3Q8N138 153 aa9.41□□□□□ -0.9
CIITA-212ENST00000618207 IGHV7-4-1A0A0J9YVY3 117 aa9.41□□□□□ -0.9
CIITA-212ENST00000618207 RBAKDNA6NC62 111 aa9.41□□□□□ -0.9
CIITA-212ENST00000618207 FBLL1A6NHQ2 334 aaKnown RBP9.41□□□□□ -0.9
CIITA-212ENST00000618207 H3BVH4 76 aa9.41□□□□□ -0.9
CIITA-212ENST00000618207 PSMB8P28062 276 aa9.41□□□□□ -0.9
CIITA-212ENST00000618207 TCTAP57738 103 aa9.41□□□□□ -0.9
CIITA-212ENST00000618207 CFHR3Q02985 330 aa9.41□□□□□ -0.9
CIITA-212ENST00000618207 COX8CQ7Z4L0 72 aa9.41□□□□□ -0.9
CIITA-212ENST00000618207 OR10J6PQ8NGY7 276 aa9.41□□□□□ -0.9
CIITA-212ENST00000618207 CHCHD1Q96BP2 118 aaKnown RBP9.41□□□□□ -0.9
CIITA-212ENST00000618207 SIGLEC8Q9NYZ4 499 aa9.41□□□□□ -0.9
CIITA-212ENST00000618207 G3V4G9 280 aa9.4□□□□□ -0.9
CIITA-212ENST00000618207 H3BUA1 57 aa9.4□□□□□ -0.9
CIITA-212ENST00000618207 CTRLP40313 264 aa9.4□□□□□ -0.9
CIITA-212ENST00000618207 DEFB136Q30KP8 78 aa9.4□□□□□ -0.9
CIITA-212ENST00000618207 A0A1B0GW15 77 aa9.4□□□□□ -0.91
CIITA-212ENST00000618207 RNASE4P34096 147 aaKnown RBP9.4□□□□□ -0.91
CIITA-212ENST00000618207 SYNJ2BPP57105 145 aa9.4□□□□□ -0.91
CIITA-212ENST00000618207 ZNF493Q6ZR52 646 aa9.4□□□□□ -0.91
CIITA-212ENST00000618207 C9orf47Q6ZRZ4 202 aa9.4□□□□□ -0.91
CIITA-212ENST00000618207 OR8A1Q8NGG7 326 aa9.4□□□□□ -0.91
CIITA-212ENST00000618207 VPREB3Q9UKI3 123 aa9.4□□□□□ -0.91
CIITA-212ENST00000618207 TRAV26-2A0A0B4J265 109 aa9.39□□□□□ -0.91
CIITA-212ENST00000618207 OR4C46A6NHA9 309 aa9.39□□□□□ -0.91
CIITA-212ENST00000618207 LINC01559Q495D7 138 aa9.39□□□□□ -0.91
CIITA-212ENST00000618207 KHDC1LQ5JSQ8 128 aa9.39□□□□□ -0.91
CIITA-212ENST00000618207 hDV102S1A0JD36 115 aa9.39□□□□□ -0.91
CIITA-212ENST00000618207 SYS1-DBNDD2H3BUS1 97 aa9.39□□□□□ -0.91
CIITA-212ENST00000618207 OR5AL1P0C617 328 aa9.39□□□□□ -0.91
CIITA-212ENST00000618207 ZNF688P0C7X2 276 aa9.39□□□□□ -0.91
CIITA-212ENST00000618207 SPANXN1Q5VSR9 72 aa9.39□□□□□ -0.91
CIITA-212ENST00000618207 C18orf65Q6ZTR6 163 aa9.39□□□□□ -0.91
CIITA-212ENST00000618207 WFDC11Q8NEX6 87 aa9.39□□□□□ -0.91
CIITA-212ENST00000618207 DUX3Q96PT4 197 aa9.39□□□□□ -0.91
CIITA-212ENST00000618207 J3QLI3 93 aa9.38□□□□□ -0.91
CIITA-212ENST00000618207 M0R381 172 aa9.38□□□□□ -0.91
CIITA-212ENST00000618207 CKS1BP61024 79 aa9.38□□□□□ -0.91
CIITA-212ENST00000618207 GAGE12BA1L429 117 aa9.38□□□□□ -0.91
CIITA-212ENST00000618207 SOCS3O14543 225 aa9.38□□□□□ -0.91
CIITA-212ENST00000618207 SAP30O75446 220 aa9.38□□□□□ -0.91
CIITA-212ENST00000618207 BRI3O95415 125 aa9.38□□□□□ -0.91
CIITA-212ENST00000618207 HERV-K104P63124 156 aa9.38□□□□□ -0.91
CIITA-212ENST00000618207 Q6ZN92 141 aa9.38□□□□□ -0.91
CIITA-212ENST00000618207 UQCR10Q9UDW1 63 aa9.38□□□□□ -0.91
CIITA-212ENST00000618207 IGLL1P15814 213 aa9.37□□□□□ -0.91
CIITA-212ENST00000618207 S100A4P26447 101 aaKnown RBP9.37□□□□□ -0.91
CIITA-212ENST00000618207 OR1N2Q8NGR9 330 aa9.37□□□□□ -0.91
CIITA-212ENST00000618207 MAP1LC3CQ9BXW4 147 aa9.37□□□□□ -0.91
CIITA-212ENST00000618207 HNRNPA3P51991 378 aaKnown RBP9.37□□□□□ -0.91
CIITA-212ENST00000618207 Q6YL49 198 aa9.37□□□□□ -0.91
CIITA-212ENST00000618207 RNF185Q96GF1 192 aa9.37□□□□□ -0.91
CIITA-212ENST00000618207 FAM110AQ9BQ89 295 aa9.37□□□□□ -0.91
CIITA-212ENST00000618207 HECTD1Q9ULT8 2610 aa9.37□□□□□ -0.91
CIITA-212ENST00000618207 FASNP49327 2511 aaKnown RBP9.37□□□□□ -0.91
CIITA-212ENST00000618207 IGHV4OR15-8A0A075B7B6 117 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms