RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 MXRA5Q9NR99 2828 aa11.97□□□□□ -0.49
SEMA3B-212ENST00000616701 FAM181BA6NEQ2 426 aa11.97□□□□□ -0.49
SEMA3B-212ENST00000616701 IGHG4P01861 327 aa11.97□□□□□ -0.49
SEMA3B-212ENST00000616701 APCSP02743 223 aa11.97□□□□□ -0.49
SEMA3B-212ENST00000616701 WFDC2Q14508 124 aa11.97□□□□□ -0.49
SEMA3B-212ENST00000616701 ETDBQ3ZM63 59 aa11.97□□□□□ -0.49
SEMA3B-212ENST00000616701 UNQ9165/PRO28630Q6UXU0 137 aa11.97□□□□□ -0.49
SEMA3B-212ENST00000616701 PRAC2D3DTV9 90 aa11.97□□□□□ -0.49
SEMA3B-212ENST00000616701 PET117Q6UWS5 81 aa11.97□□□□□ -0.49
SEMA3B-212ENST00000616701 TPPP3Q9BW30 176 aa11.97□□□□□ -0.49
SEMA3B-212ENST00000616701 ZNF492Q9P255 531 aa11.97□□□□□ -0.49
SEMA3B-212ENST00000616701 PPIFP30405 207 aaKnown RBP11.96□□□□□ -0.49
SEMA3B-212ENST00000616701 ERCC8Q13216 396 aa11.96□□□□□ -0.49
SEMA3B-212ENST00000616701 KLK9Q2XQG4 91 aa11.96□□□□□ -0.49
SEMA3B-212ENST00000616701 RNASEKQ6P5S7 137 aaKnown RBP11.96□□□□□ -0.49
SEMA3B-212ENST00000616701 C10orf99Q6UWK7 81 aa11.96□□□□□ -0.49
SEMA3B-212ENST00000616701 ZNF418Q8TF45 676 aaPredicted RBP11.96□□□□□ -0.49
SEMA3B-212ENST00000616701 KLK9Q9UKQ9 250 aa11.96□□□□□ -0.49
SEMA3B-212ENST00000616701 ERG28Q9UKR5 140 aa11.96□□□□□ -0.49
SEMA3B-212ENST00000616701 A8MWL6 223 aa11.96□□□□□ -0.5
SEMA3B-212ENST00000616701 IGF1P05019 195 aa11.96□□□□□ -0.5
SEMA3B-212ENST00000616701 KIR3DS1Q14943 382 aa11.96□□□□□ -0.5
SEMA3B-212ENST00000616701 DEFB113Q30KQ7 82 aa11.96□□□□□ -0.5
SEMA3B-212ENST00000616701 METTL26Q96S19 204 aa11.96□□□□□ -0.5
SEMA3B-212ENST00000616701 SPATA25Q9BR10 227 aa11.96□□□□□ -0.5
SEMA3B-212ENST00000616701 PPDPFQ9H3Y8 114 aa11.96□□□□□ -0.5
SEMA3B-212ENST00000616701 CR1P17927 2039 aa11.96□□□□□ -0.5
SEMA3B-212ENST00000616701 TMEM97Q5BJF2 176 aa11.95□□□□□ -0.5
SEMA3B-212ENST00000616701 Q96MF0 132 aa11.95□□□□□ -0.5
SEMA3B-212ENST00000616701 HLA-DQA1P01909 254 aa11.95□□□□□ -0.5
SEMA3B-212ENST00000616701 IGHV4-31P0DP07 118 aa11.95□□□□□ -0.5
SEMA3B-212ENST00000616701 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.95□□□□□ -0.5
SEMA3B-212ENST00000616701 C1QTNF4Q9BXJ3 329 aa11.95□□□□□ -0.5
SEMA3B-212ENST00000616701 FAM223BA6NKX1 122 aa11.94□□□□□ -0.5
SEMA3B-212ENST00000616701 MT-ATP8P03928 68 aa11.94□□□□□ -0.5
SEMA3B-212ENST00000616701 FAM223AQ8IWN6 122 aa11.94□□□□□ -0.5
SEMA3B-212ENST00000616701 DUX5Q96PT3 197 aa11.94□□□□□ -0.5
SEMA3B-212ENST00000616701 C20orf78Q9BR46 151 aa11.94□□□□□ -0.5
SEMA3B-212ENST00000616701 CRIP2P52943 208 aaPredicted RBP11.94□□□□□ -0.5
SEMA3B-212ENST00000616701 TM4SF20Q53R12 229 aa11.94□□□□□ -0.5
SEMA3B-212ENST00000616701 OR5A1Q8NGJ0 315 aa11.94□□□□□ -0.5
SEMA3B-212ENST00000616701 C18orf32Q8TCD1 76 aa11.94□□□□□ -0.5
SEMA3B-212ENST00000616701 SONP18583 2426 aaKnown RBP11.94□□□□□ -0.5
SEMA3B-212ENST00000616701 FABP2P12104 132 aa11.94□□□□□ -0.5
SEMA3B-212ENST00000616701 IGKV3-7A0A075B6H7 116 aa11.93□□□□□ -0.5
SEMA3B-212ENST00000616701 OR4X2Q8NGF9 303 aa11.93□□□□□ -0.5
SEMA3B-212ENST00000616701 A0A1W2PPM0 123 aa11.93□□□□□ -0.5
SEMA3B-212ENST00000616701 SMAD7O15105 426 aaKnown RBP11.93□□□□□ -0.5
SEMA3B-212ENST00000616701 C8orf86Q6ZUL3 223 aa11.92□□□□□ -0.5
SEMA3B-212ENST00000616701 FA2HQ7L5A8 372 aa11.92□□□□□ -0.5
SEMA3B-212ENST00000616701 NPIPB6E9PJ23 425 aa11.92□□□□□ -0.5
SEMA3B-212ENST00000616701 CT45A10P0DMU9 189 aa11.92□□□□□ -0.5
SEMA3B-212ENST00000616701 LOXL1Q08397 574 aaPredicted RBP11.92□□□□□ -0.5
SEMA3B-212ENST00000616701 LINC00173Q6ZV60 143 aa11.92□□□□□ -0.5
SEMA3B-212ENST00000616701 H3BRM9 83 aa11.91□□□□□ -0.5
SEMA3B-212ENST00000616701 ZNF80P51504 273 aaPredicted RBP11.91□□□□□ -0.5
SEMA3B-212ENST00000616701 HBBP68871 147 aa11.91□□□□□ -0.5
SEMA3B-212ENST00000616701 RBPMS2Q6ZRY4 209 aaKnown RBP11.91□□□□□ -0.5
SEMA3B-212ENST00000616701 IL17RELQ6ZVW7 336 aa11.91□□□□□ -0.5
SEMA3B-212ENST00000616701 BEX4Q9NWD9 120 aaPredicted RBP11.91□□□□□ -0.5
SEMA3B-212ENST00000616701 TRBV6-1A0A0K0K1D8 114 aa11.91□□□□□ -0.5
SEMA3B-212ENST00000616701 A0A1B0GXF2 115 aa11.91□□□□□ -0.5
SEMA3B-212ENST00000616701 SH2D1AO60880 128 aa11.91□□□□□ -0.5
SEMA3B-212ENST00000616701 EDN2P20800 178 aa11.91□□□□□ -0.5
SEMA3B-212ENST00000616701 FOXA3P55318 350 aaPredicted RBP11.91□□□□□ -0.5
SEMA3B-212ENST00000616701 PRR25Q96S07 402 aa11.91□□□□□ -0.5
SEMA3B-212ENST00000616701 A6NDN8 102 aa11.91□□□□□ -0.5
SEMA3B-212ENST00000616701 C2orf70A6NJV1 201 aa11.91□□□□□ -0.5
SEMA3B-212ENST00000616701 CT83Q5H943 113 aa11.91□□□□□ -0.5
SEMA3B-212ENST00000616701 WIPF2Q8TF74 440 aaPredicted RBP11.91□□□□□ -0.5
SEMA3B-212ENST00000616701 TMEM70Q9BUB7 260 aa11.91□□□□□ -0.5
SEMA3B-212ENST00000616701 ARMS2P0C7Q2 107 aa11.9□□□□□ -0.5
SEMA3B-212ENST00000616701 TRAV8-2A0A0B4J237 113 aa11.9□□□□□ -0.5
SEMA3B-212ENST00000616701 DEFB1P60022 68 aa11.9□□□□□ -0.5
SEMA3B-212ENST00000616701 SEC11AP67812 179 aa11.9□□□□□ -0.5
SEMA3B-212ENST00000616701 SPANXB1Q9NS25 103 aaPredicted RBP11.9□□□□□ -0.5
SEMA3B-212ENST00000616701 RPL11P62913 178 aaKnown RBP11.89□□□□□ -0.51
SEMA3B-212ENST00000616701 ITPR3Q14573 2671 aa11.89□□□□□ -0.51
SEMA3B-212ENST00000616701 J3QLI3 93 aa11.88□□□□□ -0.51
SEMA3B-212ENST00000616701 SAMD5Q5TGI4 173 aa11.88□□□□□ -0.51
SEMA3B-212ENST00000616701 C3orf56Q8N813 242 aa11.88□□□□□ -0.51
SEMA3B-212ENST00000616701 VCX2Q9H322 139 aa11.88□□□□□ -0.51
SEMA3B-212ENST00000616701 SCRT2Q9NQ03 307 aa11.88□□□□□ -0.51
SEMA3B-212ENST00000616701 VPREB3Q9UKI3 123 aa11.88□□□□□ -0.51
SEMA3B-212ENST00000616701 U3KQE9 123 aa11.88□□□□□ -0.51
SEMA3B-212ENST00000616701 IGLV1-40P01703 118 aa11.88□□□□□ -0.51
SEMA3B-212ENST00000616701 SRD5A1P18405 259 aa11.88□□□□□ -0.51
SEMA3B-212ENST00000616701 SYT8Q8NBV8 401 aa11.88□□□□□ -0.51
SEMA3B-212ENST00000616701 USMG5Q96IX5 58 aa11.88□□□□□ -0.51
SEMA3B-212ENST00000616701 C16orf92Q96LL3 132 aa11.88□□□□□ -0.51
SEMA3B-212ENST00000616701 TMEM189A5PLL7 270 aa11.88□□□□□ -0.51
SEMA3B-212ENST00000616701 HOXA3O43365 443 aaPredicted RBP11.88□□□□□ -0.51
SEMA3B-212ENST00000616701 RASL11AQ6T310 242 aa11.88□□□□□ -0.51
SEMA3B-212ENST00000616701 ATP5L2Q7Z4Y8 100 aa11.88□□□□□ -0.51
SEMA3B-212ENST00000616701 GFRA4Q9GZZ7 299 aa11.88□□□□□ -0.51
SEMA3B-212ENST00000616701 HELZ2Q9BYK8 2649 aaKnown RBP11.87□□□□□ -0.51
SEMA3B-212ENST00000616701 TRBV20-1A0A075B6N2 111 aa11.87□□□□□ -0.51
SEMA3B-212ENST00000616701 FAM162BQ5T6X4 162 aa11.87□□□□□ -0.51
SEMA3B-212ENST00000616701 C2orf91Q6ZV80 131 aa11.87□□□□□ -0.51
SEMA3B-212ENST00000616701 KRTAP1-3Q8IUG1 177 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms