RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 Q96MF0 132 aa11.96□□□□□ -0.49
NOP56-220ENST00000616692 MTORP42345 2549 aa11.96□□□□□ -0.49
NOP56-220ENST00000616692 CA6P23280 308 aa11.96□□□□□ -0.5
NOP56-220ENST00000616692 C20orf204Q6ZNR8 217 aa11.96□□□□□ -0.5
NOP56-220ENST00000616692 CGB1A6NKQ9 187 aa11.95□□□□□ -0.5
NOP56-220ENST00000616692 PGLYRP4Q96LB8 373 aa11.95□□□□□ -0.5
NOP56-220ENST00000616692 PSMB8P28062 276 aa11.95□□□□□ -0.5
NOP56-220ENST00000616692 Q71RC1 249 aaPredicted RBP11.95□□□□□ -0.5
NOP56-220ENST00000616692 LINC00482Q8N8I6 264 aa11.95□□□□□ -0.5
NOP56-220ENST00000616692 DPH3P1Q9H4G8 78 aa11.95□□□□□ -0.5
NOP56-220ENST00000616692 PEX7O00628 323 aa11.94□□□□□ -0.5
NOP56-220ENST00000616692 IGKV1D-16P01601 117 aa11.94□□□□□ -0.5
NOP56-220ENST00000616692 IFI27P40305 119 aaPredicted RBP11.94□□□□□ -0.5
NOP56-220ENST00000616692 ZCCHC24Q8N2G6 241 aaKnown RBP11.94□□□□□ -0.5
NOP56-220ENST00000616692 FGFBP3Q8TAT2 258 aa11.94□□□□□ -0.5
NOP56-220ENST00000616692 ZNF407Q9C0G0 2248 aa11.94□□□□□ -0.5
NOP56-220ENST00000616692 ATOX1O00244 68 aa11.94□□□□□ -0.5
NOP56-220ENST00000616692 SPINT2O43291 252 aa11.94□□□□□ -0.5
NOP56-220ENST00000616692 INS-IGF2F8WCM5 200 aa11.94□□□□□ -0.5
NOP56-220ENST00000616692 SLC25A16P16260 332 aa11.94□□□□□ -0.5
NOP56-220ENST00000616692 ERVK-16P61578 105 aa11.94□□□□□ -0.5
NOP56-220ENST00000616692 STHQ8IWL8 128 aa11.94□□□□□ -0.5
NOP56-220ENST00000616692 MGST2Q99735 147 aa11.94□□□□□ -0.5
NOP56-220ENST00000616692 RPP21Q9H633 154 aaKnown RBP11.93□□□□□ -0.5
NOP56-220ENST00000616692 C9orf106Q8NAJ2 232 aa11.93□□□□□ -0.5
NOP56-220ENST00000616692 NEXN-AS1Q8NBZ9 246 aa11.93□□□□□ -0.5
NOP56-220ENST00000616692 LINC01560Q8TB33 94 aa11.93□□□□□ -0.5
NOP56-220ENST00000616692 ZNF442Q9H7R0 627 aa11.93□□□□□ -0.5
NOP56-220ENST00000616692 CSMD2Q7Z408 3487 aa11.93□□□□□ -0.5
NOP56-220ENST00000616692 PGPA6NDG6 321 aa11.92□□□□□ -0.5
NOP56-220ENST00000616692 NDUFC2O95298 119 aa11.92□□□□□ -0.5
NOP56-220ENST00000616692 CRYGSP22914 178 aa11.92□□□□□ -0.5
NOP56-220ENST00000616692 CRIP2P52943 208 aaPredicted RBP11.92□□□□□ -0.5
NOP56-220ENST00000616692 CT83Q5H943 113 aa11.92□□□□□ -0.5
NOP56-220ENST00000616692 MDP1Q86V88 176 aa11.92□□□□□ -0.5
NOP56-220ENST00000616692 ANKHD1Q8IWZ3 2542 aaKnown RBP11.92□□□□□ -0.5
NOP56-220ENST00000616692 LY6G6DO95868 133 aa11.92□□□□□ -0.5
NOP56-220ENST00000616692 PIGYQ3MUY2 71 aa11.92□□□□□ -0.5
NOP56-220ENST00000616692 C7orf69Q9H7B7 122 aa11.92□□□□□ -0.5
NOP56-220ENST00000616692 TRAV41A0A0B4J266 112 aa11.91□□□□□ -0.5
NOP56-220ENST00000616692 C5orf63A6NC05 138 aa11.91□□□□□ -0.5
NOP56-220ENST00000616692 CXCL13O43927 109 aa11.91□□□□□ -0.5
NOP56-220ENST00000616692 BRK1Q8WUW1 75 aa11.91□□□□□ -0.5
NOP56-220ENST00000616692 SSMEM1Q8WWF3 244 aa11.91□□□□□ -0.5
NOP56-220ENST00000616692 C16orf92Q96LL3 132 aa11.91□□□□□ -0.5
NOP56-220ENST00000616692 C16orf95Q9H693 158 aa11.91□□□□□ -0.5
NOP56-220ENST00000616692 DNAJC13O75165 2243 aa11.91□□□□□ -0.5
NOP56-220ENST00000616692 EML6Q6ZMW3 1958 aa11.9□□□□□ -0.5
NOP56-220ENST00000616692 FAM90A10PA6NDY2 464 aa11.9□□□□□ -0.5
NOP56-220ENST00000616692 CD164Q04900 197 aa11.9□□□□□ -0.5
NOP56-220ENST00000616692 VMA21Q3ZAQ7 101 aa11.9□□□□□ -0.5
NOP56-220ENST00000616692 TMEM170BQ5T4T1 132 aa11.9□□□□□ -0.5
NOP56-220ENST00000616692 GFRA4Q9GZZ7 299 aa11.9□□□□□ -0.5
NOP56-220ENST00000616692 EPM2AB3EWF7 344 aa11.9□□□□□ -0.5
NOP56-220ENST00000616692 PYYP10082 97 aa11.9□□□□□ -0.5
NOP56-220ENST00000616692 TWIST1Q15672 202 aa11.9□□□□□ -0.5
NOP56-220ENST00000616692 UPK3BQ9BT76 320 aa11.9□□□□□ -0.5
NOP56-220ENST00000616692 RTL8AQ9BWD3 113 aa11.9□□□□□ -0.5
NOP56-220ENST00000616692 COL8A2P25067 703 aa11.89□□□□□ -0.51
NOP56-220ENST00000616692 SPG11Q96JI7 2443 aa11.89□□□□□ -0.51
NOP56-220ENST00000616692 NCBP2LA6PVI3 153 aaKnown RBP11.89□□□□□ -0.51
NOP56-220ENST00000616692 UBE2L3P68036 154 aaKnown RBP11.89□□□□□ -0.51
NOP56-220ENST00000616692 PAX8Q06710 450 aa11.89□□□□□ -0.51
NOP56-220ENST00000616692 PMAIP1Q13794 54 aa11.89□□□□□ -0.51
NOP56-220ENST00000616692 NDUFA11Q86Y39 141 aa11.89□□□□□ -0.51
NOP56-220ENST00000616692 FAM90A1Q86YD7 464 aa11.89□□□□□ -0.51
NOP56-220ENST00000616692 DEFB108AA8MXU0 73 aa11.88□□□□□ -0.51
NOP56-220ENST00000616692 FCGR3BO75015 233 aa11.88□□□□□ -0.51
NOP56-220ENST00000616692 LINC01620Q4KN68 170 aa11.88□□□□□ -0.51
NOP56-220ENST00000616692 MIR17HGQ75NE6 70 aa11.88□□□□□ -0.51
NOP56-220ENST00000616692 TRAV12-2A0A075B6T6 113 aa11.87□□□□□ -0.51
NOP56-220ENST00000616692 CXCL5P42830 114 aa11.87□□□□□ -0.51
NOP56-220ENST00000616692 PRSS12P56730 875 aa11.87□□□□□ -0.51
NOP56-220ENST00000616692 FXYD7P58549 80 aa11.87□□□□□ -0.51
NOP56-220ENST00000616692 HIST1H4AP62805 103 aaKnown RBP11.87□□□□□ -0.51
NOP56-220ENST00000616692 CCL19Q99731 98 aa11.87□□□□□ -0.51
NOP56-220ENST00000616692 IGKV1D-43A0A0B4J1Z2 117 aa11.86□□□□□ -0.51
NOP56-220ENST00000616692 IGKV1-6A0A0C4DH72 117 aa11.86□□□□□ -0.51
NOP56-220ENST00000616692 LOC389332A0A1B0GUA5 103 aa11.86□□□□□ -0.51
NOP56-220ENST00000616692 A0A1W2PPR1 153 aa11.86□□□□□ -0.51
NOP56-220ENST00000616692 ELANEP08246 267 aa11.86□□□□□ -0.51
NOP56-220ENST00000616692 NPC2P61916 151 aa11.86□□□□□ -0.51
NOP56-220ENST00000616692 FOXF2Q12947 444 aa11.86□□□□□ -0.51
NOP56-220ENST00000616692 SMR3AQ99954 134 aa11.86□□□□□ -0.51
NOP56-220ENST00000616692 ABCA4P78363 2273 aa11.86□□□□□ -0.51
NOP56-220ENST00000616692 TMEM200BQ69YZ2 307 aa11.86□□□□□ -0.51
NOP56-220ENST00000616692 WFDC3Q8IUB2 231 aa11.86□□□□□ -0.51
NOP56-220ENST00000616692 LYZL4Q96KX0 146 aa11.86□□□□□ -0.51
NOP56-220ENST00000616692 RAI1Q7Z5J4 1906 aaPredicted RBP11.85□□□□□ -0.51
NOP56-220ENST00000616692 LOXP28300 417 aaPredicted RBP11.85□□□□□ -0.51
NOP56-220ENST00000616692 C3orf36Q3SXR2 165 aa11.85□□□□□ -0.51
NOP56-220ENST00000616692 C5orf38Q86SI9 138 aa11.85□□□□□ -0.51
NOP56-220ENST00000616692 PRSS22Q9GZN4 317 aa11.85□□□□□ -0.51
NOP56-220ENST00000616692 DOCK7Q96N67 2140 aa11.85□□□□□ -0.51
NOP56-220ENST00000616692 TRBV10-2A0A0K0K1G8 114 aa11.85□□□□□ -0.51
NOP56-220ENST00000616692 NPIPB11E5RHQ5 1161 aa11.85□□□□□ -0.51
NOP56-220ENST00000616692 LINC00643Q86TS7 51 aa11.85□□□□□ -0.51
NOP56-220ENST00000616692 ZNF22P17026 224 aaPredicted RBP11.84□□□□□ -0.51
NOP56-220ENST00000616692 DEFB121Q5J5C9 76 aa11.84□□□□□ -0.51
NOP56-220ENST00000616692 WDR31Q8NA23 367 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms