RNA–Protein interactions for RNA: ENST00000616237.1

LHX1-202, Transcript of LIM homeobox 1, humanhuman

TSL 1 (best)

Gene LHX1, Length 1,364 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1-202ENST00000616237 TYMSP04818 313 aa11.84□□□□□ -0.51
LHX1-202ENST00000616237 LGALSLQ3ZCW2 172 aaPredicted RBP11.84□□□□□ -0.51
LHX1-202ENST00000616237 MBD3L1Q8WWY6 194 aa11.84□□□□□ -0.51
LHX1-202ENST00000616237 NDFIP1Q9BT67 221 aa11.84□□□□□ -0.51
LHX1-202ENST00000616237 PEX7O00628 323 aa11.83□□□□□ -0.52
LHX1-202ENST00000616237 GCGP01275 180 aa11.83□□□□□ -0.52
LHX1-202ENST00000616237 IFNA7P01567 189 aa11.83□□□□□ -0.52
LHX1-202ENST00000616237 IGHV3-53P01767 116 aa11.83□□□□□ -0.52
LHX1-202ENST00000616237 FAM213BQ8TBF2 198 aa11.83□□□□□ -0.52
LHX1-202ENST00000616237 HECTD4Q9Y4D8 3996 aa11.83□□□□□ -0.52
LHX1-202ENST00000616237 UMAD1C9J7I0 102 aa11.82□□□□□ -0.52
LHX1-202ENST00000616237 PFDN1O60925 122 aa11.82□□□□□ -0.52
LHX1-202ENST00000616237 Q6ZR54 194 aa11.82□□□□□ -0.52
LHX1-202ENST00000616237 STOML3Q8TAV4 291 aa11.82□□□□□ -0.52
LHX1-202ENST00000616237 RASL10AQ92737 203 aa11.82□□□□□ -0.52
LHX1-202ENST00000616237 NKX6-2Q9C056 277 aaPredicted RBP11.82□□□□□ -0.52
LHX1-202ENST00000616237 LINC00588Q9Y4M8 146 aa11.82□□□□□ -0.52
LHX1-202ENST00000616237 FBLL1A6NHQ2 334 aaKnown RBP11.81□□□□□ -0.52
LHX1-202ENST00000616237 H3BNG1 76 aa11.81□□□□□ -0.52
LHX1-202ENST00000616237 SMUG1Q53HV7 270 aa11.81□□□□□ -0.52
LHX1-202ENST00000616237 ZNRF2Q8NHG8 242 aa11.81□□□□□ -0.52
LHX1-202ENST00000616237 SFT2D1Q8WV19 159 aa11.81□□□□□ -0.52
LHX1-202ENST00000616237 HIST1H2BAQ96A08 127 aa11.81□□□□□ -0.52
LHX1-202ENST00000616237 SPXQ9BT56 116 aa11.81□□□□□ -0.52
LHX1-202ENST00000616237 ARL2-SNX15V9GYD0 113 aa11.81□□□□□ -0.52
LHX1-202ENST00000616237 A0A1B0GV50 99 aa11.8□□□□□ -0.52
LHX1-202ENST00000616237 PFN1P07737 140 aaKnown RBP11.8□□□□□ -0.52
LHX1-202ENST00000616237 TPT1P13693 172 aaKnown RBP11.8□□□□□ -0.52
LHX1-202ENST00000616237 FHL2Q14192 279 aa11.8□□□□□ -0.52
LHX1-202ENST00000616237 SAPCD1Q5SSQ6 148 aa11.8□□□□□ -0.52
LHX1-202ENST00000616237 Q86TA4 180 aa11.8□□□□□ -0.52
LHX1-202ENST00000616237 SDF2L1Q9HCN8 221 aa11.8□□□□□ -0.52
LHX1-202ENST00000616237 hCG_2014768A0A024R1R8 64 aa11.79□□□□□ -0.52
LHX1-202ENST00000616237 A0A096LPF7 62 aa11.79□□□□□ -0.52
LHX1-202ENST00000616237 PAGE4O60829 102 aa11.79□□□□□ -0.52
LHX1-202ENST00000616237 SFTA3P0C7M3 94 aa11.79□□□□□ -0.52
LHX1-202ENST00000616237 CCL18P55774 89 aa11.79□□□□□ -0.52
LHX1-202ENST00000616237 FAM3BP58499 235 aaPredicted RBP11.79□□□□□ -0.52
LHX1-202ENST00000616237 EIF5AP63241 154 aaKnown RBP11.79□□□□□ -0.52
LHX1-202ENST00000616237 ESRGQ1W209 222 aa11.79□□□□□ -0.52
LHX1-202ENST00000616237 ZNF479Q96JC4 524 aa11.79□□□□□ -0.52
LHX1-202ENST00000616237 KCNS1Q96KK3 526 aa11.79□□□□□ -0.52
LHX1-202ENST00000616237 M0R2P5 195 aa11.79□□□□□ -0.52
LHX1-202ENST00000616237 C1QBP02746 253 aa11.79□□□□□ -0.52
LHX1-202ENST00000616237 ZFP69Q49AA0 526 aa11.79□□□□□ -0.52
LHX1-202ENST00000616237 CST9LP1Q5W188 147 aa11.79□□□□□ -0.52
LHX1-202ENST00000616237 DPPA3Q6W0C5 159 aa11.79□□□□□ -0.52
LHX1-202ENST00000616237 IGKV3D-20A0A0C4DH25 116 aa11.78□□□□□ -0.52
LHX1-202ENST00000616237 RTL8CO15255 209 aa11.78□□□□□ -0.52
LHX1-202ENST00000616237 CRIP1P50238 77 aa11.78□□□□□ -0.52
LHX1-202ENST00000616237 PPT1P50897 306 aa11.78□□□□□ -0.52
LHX1-202ENST00000616237 CRYBA4P53673 196 aa11.78□□□□□ -0.52
LHX1-202ENST00000616237 PAX4O43316 350 aa11.77□□□□□ -0.53
LHX1-202ENST00000616237 H2AFB1P0C5Y9 115 aa11.77□□□□□ -0.53
LHX1-202ENST00000616237 ZC2HC1AQ96GY0 325 aa11.77□□□□□ -0.53
LHX1-202ENST00000616237 C9orf85Q96MD7 179 aa11.77□□□□□ -0.53
LHX1-202ENST00000616237 PRO0255Q9UI72 69 aa11.77□□□□□ -0.53
LHX1-202ENST00000616237 HHLA3Q9XRX5 114 aa11.77□□□□□ -0.53
LHX1-202ENST00000616237 TRBV6-1A0A0K0K1D8 114 aa11.76□□□□□ -0.53
LHX1-202ENST00000616237 RNASE3P12724 160 aaKnown RBP11.76□□□□□ -0.53
LHX1-202ENST00000616237 CCL20P78556 96 aa11.76□□□□□ -0.53
LHX1-202ENST00000616237 COX8CQ7Z4L0 72 aa11.76□□□□□ -0.53
LHX1-202ENST00000616237 TCEAL7Q9BRU2 100 aa11.76□□□□□ -0.53
LHX1-202ENST00000616237 PKD1P98161 4303 aa11.75□□□□□ -0.53
LHX1-202ENST00000616237 TRAV4A0A0B4J268 109 aa11.75□□□□□ -0.53
LHX1-202ENST00000616237 FABP5P3A8MUU1 101 aa11.75□□□□□ -0.53
LHX1-202ENST00000616237 AKAP14Q86UN6 197 aa11.75□□□□□ -0.53
LHX1-202ENST00000616237 FMC1Q96HJ9 113 aa11.75□□□□□ -0.53
LHX1-202ENST00000616237 ZFP30Q9Y2G7 519 aa11.75□□□□□ -0.53
LHX1-202ENST00000616237 TRGV4A0A0C4DH28 118 aa11.74□□□□□ -0.53
LHX1-202ENST00000616237 LTAP01374 205 aa11.74□□□□□ -0.53
LHX1-202ENST00000616237 ZNF575Q86XF7 245 aa11.74□□□□□ -0.53
LHX1-202ENST00000616237 NBDYA0A0U1RRE5 68 aa11.73□□□□□ -0.53
LHX1-202ENST00000616237 SCO2A0A1W2PP80 73 aa11.73□□□□□ -0.53
LHX1-202ENST00000616237 PGPEP1LA6NFU8 196 aa11.73□□□□□ -0.53
LHX1-202ENST00000616237 C9JCJ5 164 aa11.73□□□□□ -0.53
LHX1-202ENST00000616237 AKR1C3P42330 323 aa11.73□□□□□ -0.53
LHX1-202ENST00000616237 SULT1A2P50226 295 aa11.73□□□□□ -0.53
LHX1-202ENST00000616237 UBE2G1P62253 170 aa11.73□□□□□ -0.53
LHX1-202ENST00000616237 SLAQ13239 276 aa11.73□□□□□ -0.53
LHX1-202ENST00000616237 ZNF876PQ49A33 203 aa11.73□□□□□ -0.53
LHX1-202ENST00000616237 C9orf62Q8N4C0 152 aa11.73□□□□□ -0.53
LHX1-202ENST00000616237 OR4C5Q8NGB2 326 aa11.73□□□□□ -0.53
LHX1-202ENST00000616237 UPK3BQ9BT76 320 aa11.73□□□□□ -0.53
LHX1-202ENST00000616237 Q9H8V8 135 aa11.73□□□□□ -0.53
LHX1-202ENST00000616237 MRPS16Q9Y3D3 137 aaKnown RBP11.73□□□□□ -0.53
LHX1-202ENST00000616237 ICOSQ9Y6W8 199 aa11.73□□□□□ -0.53
LHX1-202ENST00000616237 TRAV1-1A0A0B4J248 108 aa11.72□□□□□ -0.53
LHX1-202ENST00000616237 A0A1B0GVG6 124 aa11.72□□□□□ -0.53
LHX1-202ENST00000616237 SH2D1AO60880 128 aa11.72□□□□□ -0.53
LHX1-202ENST00000616237 RAB5CP51148 216 aa11.72□□□□□ -0.53
LHX1-202ENST00000616237 LINC00336Q6ZUF6 198 aa11.72□□□□□ -0.53
LHX1-202ENST00000616237 SLC51BQ86UW2 128 aa11.72□□□□□ -0.53
LHX1-202ENST00000616237 PKHD1P08F94 4074 aa11.72□□□□□ -0.53
LHX1-202ENST00000616237 DNAH11Q96DT5 4516 aa11.71□□□□□ -0.53
LHX1-202ENST00000616237 DYNC1H1Q14204 4646 aaKnown RBP11.71□□□□□ -0.53
LHX1-202ENST00000616237 A0A1B0GVY2 172 aa11.71□□□□□ -0.53
LHX1-202ENST00000616237 ZNF674Q2M3X9 581 aa11.71□□□□□ -0.53
LHX1-202ENST00000616237 ZNF506Q5JVG8 444 aa11.71□□□□□ -0.53
LHX1-202ENST00000616237 EIF5AL1Q6IS14 154 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms