RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 TYMSP04818 313 aa14.01□□□□□ -0.17
TRAPPC3-208ENST00000616074 CRYGDP07320 174 aa14.01□□□□□ -0.17
TRAPPC3-208ENST00000616074 RPL12P30050 165 aaKnown RBP14.01□□□□□ -0.17
TRAPPC3-208ENST00000616074 FAM74A1Q5RGS3 127 aa14.01□□□□□ -0.17
TRAPPC3-208ENST00000616074 TVP23CQ96ET8 276 aa14.01□□□□□ -0.17
TRAPPC3-208ENST00000616074 MYCBP2O75592 4640 aa14□□□□□ -0.17
TRAPPC3-208ENST00000616074 TRAV8-1A0A0A6YYK1 113 aa14□□□□□ -0.17
TRAPPC3-208ENST00000616074 TRAV21A0A0B4J279 112 aa14□□□□□ -0.17
TRAPPC3-208ENST00000616074 PET100P0DJ07 73 aa14□□□□□ -0.17
TRAPPC3-208ENST00000616074 INAFM2P0DMQ5 153 aa14□□□□□ -0.17
TRAPPC3-208ENST00000616074 Q5VSD8 79 aa14□□□□□ -0.17
TRAPPC3-208ENST00000616074 C10orf126Q8N4M7 172 aa14□□□□□ -0.17
TRAPPC3-208ENST00000616074 WFDC1Q9HC57 220 aa14□□□□□ -0.17
TRAPPC3-208ENST00000616074 SSNA1O43805 119 aa13.99□□□□□ -0.17
TRAPPC3-208ENST00000616074 GNG5P63218 68 aa13.99□□□□□ -0.17
TRAPPC3-208ENST00000616074 PQLC2Q6ZP29 291 aa13.99□□□□□ -0.17
TRAPPC3-208ENST00000616074 MARVELD1Q9BSK0 173 aa13.99□□□□□ -0.17
TRAPPC3-208ENST00000616074 TREM1Q9NP99 234 aa13.99□□□□□ -0.17
TRAPPC3-208ENST00000616074 GATA1P15976 413 aaPredicted RBP13.98□□□□□ -0.17
TRAPPC3-208ENST00000616074 RAB2AP61019 212 aa13.98□□□□□ -0.17
TRAPPC3-208ENST00000616074 ACOT6Q3I5F7 207 aaPredicted RBP13.98□□□□□ -0.17
TRAPPC3-208ENST00000616074 NHLRC2Q8NBF2 726 aa13.98□□□□□ -0.17
TRAPPC3-208ENST00000616074 SDF2L1Q9HCN8 221 aa13.98□□□□□ -0.17
TRAPPC3-208ENST00000616074 DNAH8Q96JB1 4490 aa13.98□□□□□ -0.17
TRAPPC3-208ENST00000616074 A0A1W2PPV4 95 aa13.97□□□□□ -0.17
TRAPPC3-208ENST00000616074 GCSHP23434 173 aa13.97□□□□□ -0.17
TRAPPC3-208ENST00000616074 SH2D6Q7Z4S9 175 aa13.97□□□□□ -0.17
TRAPPC3-208ENST00000616074 ARL6IP6Q8N6S5 226 aa13.97□□□□□ -0.17
TRAPPC3-208ENST00000616074 FRZBQ92765 325 aa13.97□□□□□ -0.17
TRAPPC3-208ENST00000616074 IGHV3-38A0A0C4DH36 116 aa13.96□□□□□ -0.17
TRAPPC3-208ENST00000616074 HMGB3O15347 200 aaKnown RBP13.96□□□□□ -0.17
TRAPPC3-208ENST00000616074 PPT1P50897 306 aa13.96□□□□□ -0.17
TRAPPC3-208ENST00000616074 TIRAPP58753 221 aa13.96□□□□□ -0.17
TRAPPC3-208ENST00000616074 ASB13Q8WXK3 278 aa13.96□□□□□ -0.17
TRAPPC3-208ENST00000616074 KCNS1Q96KK3 526 aa13.96□□□□□ -0.17
TRAPPC3-208ENST00000616074 SGK494Q96LW2 274 aa13.96□□□□□ -0.17
TRAPPC3-208ENST00000616074 DMBT1Q9UGM3 2413 aaPredicted RBP13.95□□□□□ -0.18
TRAPPC3-208ENST00000616074 FBLL1A6NHQ2 334 aaKnown RBP13.95□□□□□ -0.18
TRAPPC3-208ENST00000616074 SMR3BP02814 79 aaPredicted RBP13.94□□□□□ -0.18
TRAPPC3-208ENST00000616074 LINC01556Q5JQF7 62 aa13.94□□□□□ -0.18
TRAPPC3-208ENST00000616074 SLC25A29Q8N8R3 303 aa13.94□□□□□ -0.18
TRAPPC3-208ENST00000616074 OR10G9Q8NGN4 311 aa13.94□□□□□ -0.18
TRAPPC3-208ENST00000616074 OR10G7Q8NGN6 311 aa13.94□□□□□ -0.18
TRAPPC3-208ENST00000616074 SRRM2Q9UQ35 2752 aaKnown RBP13.93□□□□□ -0.18
TRAPPC3-208ENST00000616074 LRCOL1A6NCL2 159 aa13.93□□□□□ -0.18
TRAPPC3-208ENST00000616074 PSCAO43653 123 aa13.93□□□□□ -0.18
TRAPPC3-208ENST00000616074 ZNF80P51504 273 aaPredicted RBP13.93□□□□□ -0.18
TRAPPC3-208ENST00000616074 HAMPP81172 84 aa13.93□□□□□ -0.18
TRAPPC3-208ENST00000616074 DPPA3Q6W0C5 159 aa13.93□□□□□ -0.18
TRAPPC3-208ENST00000616074 C11orf21Q9P2W6 132 aa13.93□□□□□ -0.18
TRAPPC3-208ENST00000616074 IGLV5-52A0A0A0MRZ9 124 aa13.92□□□□□ -0.18
TRAPPC3-208ENST00000616074 ARL14EPLP0DKL9 152 aa13.92□□□□□ -0.18
TRAPPC3-208ENST00000616074 ZNF876PQ49A33 203 aa13.92□□□□□ -0.18
TRAPPC3-208ENST00000616074 CFAP126Q5VTH2 177 aa13.92□□□□□ -0.18
TRAPPC3-208ENST00000616074 IGHV3-73A0A0B4J1V6 119 aa13.91□□□□□ -0.18
TRAPPC3-208ENST00000616074 IBA57-AS1B1ANH7 110 aa13.91□□□□□ -0.18
TRAPPC3-208ENST00000616074 RS1O15537 224 aa13.91□□□□□ -0.18
TRAPPC3-208ENST00000616074 PFN1P07737 140 aaKnown RBP13.91□□□□□ -0.18
TRAPPC3-208ENST00000616074 RHOHQ15669 191 aa13.91□□□□□ -0.18
TRAPPC3-208ENST00000616074 OR10J3Q5JRS4 329 aa13.91□□□□□ -0.18
TRAPPC3-208ENST00000616074 NDFIP1Q9BT67 221 aa13.91□□□□□ -0.18
TRAPPC3-208ENST00000616074 TRAV8-6A0A0B4J262 113 aa13.9□□□□□ -0.18
TRAPPC3-208ENST00000616074 SERTM2A0A1B0GWG4 89 aa13.9□□□□□ -0.18
TRAPPC3-208ENST00000616074 TRBV6-4A0A1B0GX49 114 aa13.9□□□□□ -0.18
TRAPPC3-208ENST00000616074 TCRAP04437 139 aa13.9□□□□□ -0.18
TRAPPC3-208ENST00000616074 STAG3L2P0CL84 134 aa13.9□□□□□ -0.18
TRAPPC3-208ENST00000616074 STAG3L3P0CL85 134 aa13.9□□□□□ -0.18
TRAPPC3-208ENST00000616074 CDC34P49427 236 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC3-208ENST00000616074 TMEM75Q8N9X5 138 aa13.9□□□□□ -0.18
TRAPPC3-208ENST00000616074 PRADC1Q9BSG0 188 aa13.9□□□□□ -0.18
TRAPPC3-208ENST00000616074 Q9HAA7 133 aa13.9□□□□□ -0.18
TRAPPC3-208ENST00000616074 GCGP01275 180 aa13.89□□□□□ -0.19
TRAPPC3-208ENST00000616074 C5orf17Q8NAS9 161 aa13.89□□□□□ -0.19
TRAPPC3-208ENST00000616074 NTN5Q8WTR8 489 aaPredicted RBP13.89□□□□□ -0.19
TRAPPC3-208ENST00000616074 C9orf85Q96MD7 179 aa13.89□□□□□ -0.19
TRAPPC3-208ENST00000616074 TAAR5O14804 337 aa13.88□□□□□ -0.19
TRAPPC3-208ENST00000616074 CIDEAO60543 219 aa13.88□□□□□ -0.19
TRAPPC3-208ENST00000616074 IGHV3-30P01768 117 aa13.88□□□□□ -0.19
TRAPPC3-208ENST00000616074 IGHV3-33P01772 117 aa13.88□□□□□ -0.19
TRAPPC3-208ENST00000616074 IGHV3-30-3P0DP02 117 aa13.88□□□□□ -0.19
TRAPPC3-208ENST00000616074 IGHV3-30-5P0DP03 117 aa13.88□□□□□ -0.19
TRAPPC3-208ENST00000616074 DEFA1P59665 94 aa13.88□□□□□ -0.19
TRAPPC3-208ENST00000616074 DEFA3P59666 94 aa13.88□□□□□ -0.19
TRAPPC3-208ENST00000616074 Q8N814 137 aa13.88□□□□□ -0.19
TRAPPC3-208ENST00000616074 HSD17B11Q8NBQ5 300 aa13.88□□□□□ -0.19
TRAPPC3-208ENST00000616074 OR2G3Q8NGZ4 309 aa13.88□□□□□ -0.19
TRAPPC3-208ENST00000616074 PSG8Q9UQ74 426 aa13.88□□□□□ -0.19
TRAPPC3-208ENST00000616074 FLG2Q5D862 2391 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC3-208ENST00000616074 PGPEP1LA6NFU8 196 aa13.87□□□□□ -0.19
TRAPPC3-208ENST00000616074 IGLV2-11P01706 119 aa13.87□□□□□ -0.19
TRAPPC3-208ENST00000616074 ZNF506Q5JVG8 444 aa13.87□□□□□ -0.19
TRAPPC3-208ENST00000616074 LELP1Q5T871 98 aa13.87□□□□□ -0.19
TRAPPC3-208ENST00000616074 SUN5Q8TC36 379 aa13.87□□□□□ -0.19
TRAPPC3-208ENST00000616074 TMEM70Q9BUB7 260 aa13.87□□□□□ -0.19
TRAPPC3-208ENST00000616074 K7EQM0 130 aa13.86□□□□□ -0.19
TRAPPC3-208ENST00000616074 GCHFRP30047 84 aa13.86□□□□□ -0.19
TRAPPC3-208ENST00000616074 RAB24Q969Q5 203 aa13.86□□□□□ -0.19
TRAPPC3-208ENST00000616074 BOLA1Q9Y3E2 137 aa13.86□□□□□ -0.19
TRAPPC3-208ENST00000616074 A6NHS1 94 aa13.85□□□□□ -0.19
TRAPPC3-208ENST00000616074 GGTLC3B5MD39 225 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms