RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 C11orf94C9JXX5 98 aa3.96□□□□□ -1.78
CPNE3-208ENST00000614678 BCL2L11O43521 198 aa3.96□□□□□ -1.78
CPNE3-208ENST00000614678 GCGP01275 180 aa3.96□□□□□ -1.78
CPNE3-208ENST00000614678 GHRHP01286 108 aa3.96□□□□□ -1.78
CPNE3-208ENST00000614678 TSPOP30536 169 aa3.96□□□□□ -1.78
CPNE3-208ENST00000614678 S100A7P31151 101 aa3.96□□□□□ -1.78
CPNE3-208ENST00000614678 RPL19P84098 196 aaKnown RBP3.96□□□□□ -1.78
CPNE3-208ENST00000614678 AKR1C8PQ5T2L2 129 aa3.96□□□□□ -1.78
CPNE3-208ENST00000614678 KRTAP17-1Q9BYP8 105 aa3.96□□□□□ -1.78
CPNE3-208ENST00000614678 KCNIP2Q9NS61 270 aa3.96□□□□□ -1.78
CPNE3-208ENST00000614678 LRP1BQ9NZR2 4599 aa3.96□□□□□ -1.78
CPNE3-208ENST00000614678 BORCS7-ASMTA0A0B4J1R7 106 aa3.95□□□□□ -1.78
CPNE3-208ENST00000614678 CTXND1A0A1B0GTU2 59 aa3.95□□□□□ -1.78
CPNE3-208ENST00000614678 GRIFINA4D1Z8 144 aa3.95□□□□□ -1.78
CPNE3-208ENST00000614678 CXorf1O96002 111 aa3.95□□□□□ -1.78
CPNE3-208ENST00000614678 AMBPP02760 352 aa3.95□□□□□ -1.78
CPNE3-208ENST00000614678 ANKRD39Q53RE8 183 aa3.95□□□□□ -1.78
CPNE3-208ENST00000614678 CST9LP1Q5W188 147 aa3.95□□□□□ -1.78
CPNE3-208ENST00000614678 Q6ZSN1 163 aa3.95□□□□□ -1.78
CPNE3-208ENST00000614678 LINC00612Q8N6U2 182 aa3.95□□□□□ -1.78
CPNE3-208ENST00000614678 ZC2HC1AQ96GY0 325 aa3.95□□□□□ -1.78
CPNE3-208ENST00000614678 TRGV2A0A075B6R0 118 aa3.95□□□□□ -1.78
CPNE3-208ENST00000614678 C9JCJ5 164 aa3.95□□□□□ -1.78
CPNE3-208ENST00000614678 H2AFB1P0C5Y9 115 aa3.95□□□□□ -1.78
CPNE3-208ENST00000614678 CSN1S1P47710 185 aa3.95□□□□□ -1.78
CPNE3-208ENST00000614678 ESRGQ1W209 222 aa3.95□□□□□ -1.78
CPNE3-208ENST00000614678 PYGO2Q9BRQ0 406 aa3.95□□□□□ -1.78
CPNE3-208ENST00000614678 ARL2-SNX15V9GYD0 113 aa3.95□□□□□ -1.78
CPNE3-208ENST00000614678 HMSDA8MTL9 139 aa3.95□□□□□ -1.78
CPNE3-208ENST00000614678 SNURFLB1AK76 121 aa3.95□□□□□ -1.78
CPNE3-208ENST00000614678 RTL8CO15255 209 aa3.95□□□□□ -1.78
CPNE3-208ENST00000614678 NDUFS6O75380 124 aaKnown RBP3.95□□□□□ -1.78
CPNE3-208ENST00000614678 TMEM256Q8N2U0 113 aa3.95□□□□□ -1.78
CPNE3-208ENST00000614678 Q8N3U1 123 aa3.95□□□□□ -1.78
CPNE3-208ENST00000614678 C9orf62Q8N4C0 152 aa3.95□□□□□ -1.78
CPNE3-208ENST00000614678 EIF4E3Q8N5X7 224 aaKnown RBP3.95□□□□□ -1.78
CPNE3-208ENST00000614678 LYRM9A8MSI8 78 aa3.94□□□□□ -1.78
CPNE3-208ENST00000614678 SPINK4O60575 86 aa3.94□□□□□ -1.78
CPNE3-208ENST00000614678 IFNA7P01567 189 aa3.94□□□□□ -1.78
CPNE3-208ENST00000614678 ATP5G1P05496 136 aa3.94□□□□□ -1.78
CPNE3-208ENST00000614678 ZNF345Q14585 488 aa3.94□□□□□ -1.78
CPNE3-208ENST00000614678 Q6AWC8 147 aa3.94□□□□□ -1.78
CPNE3-208ENST00000614678 ALKAL2Q6UX46 152 aa3.94□□□□□ -1.78
CPNE3-208ENST00000614678 ODF3Q96PU9 254 aa3.94□□□□□ -1.78
CPNE3-208ENST00000614678 SAMD10Q9BYL1 202 aa3.94□□□□□ -1.78
CPNE3-208ENST00000614678 TMEM189A5PLL7 270 aa3.94□□□□□ -1.78
CPNE3-208ENST00000614678 RNASE3P12724 160 aaKnown RBP3.94□□□□□ -1.78
CPNE3-208ENST00000614678 TCL1AP56279 114 aa3.94□□□□□ -1.78
CPNE3-208ENST00000614678 FLI1Q01543 452 aaPredicted RBP3.94□□□□□ -1.78
CPNE3-208ENST00000614678 LYPD1Q8N2G4 141 aa3.94□□□□□ -1.78
CPNE3-208ENST00000614678 C5orf17Q8NAS9 161 aa3.94□□□□□ -1.78
CPNE3-208ENST00000614678 STOML3Q8TAV4 291 aa3.94□□□□□ -1.78
CPNE3-208ENST00000614678 RBAKDNA6NC62 111 aa3.94□□□□□ -1.78
CPNE3-208ENST00000614678 PEX7O00628 323 aa3.94□□□□□ -1.78
CPNE3-208ENST00000614678 FHL2Q14192 279 aa3.94□□□□□ -1.78
CPNE3-208ENST00000614678 KANTRA0A1W2PQU2 76 aa3.94□□□□□ -1.78
CPNE3-208ENST00000614678 DAZ2Q13117 558 aaKnown RBP3.94□□□□□ -1.78
CPNE3-208ENST00000614678 Q86TA4 180 aa3.94□□□□□ -1.78
CPNE3-208ENST00000614678 TCTE3Q8IZS6 198 aa3.94□□□□□ -1.78
CPNE3-208ENST00000614678 DEFB104AQ8WTQ1 72 aa3.94□□□□□ -1.78
CPNE3-208ENST00000614678 LINC00587B1AMM8 73 aa3.93□□□□□ -1.78
CPNE3-208ENST00000614678 FAM159AQ6UWV7 190 aa3.93□□□□□ -1.78
CPNE3-208ENST00000614678 RXFP4Q8TDU9 374 aa3.93□□□□□ -1.78
CPNE3-208ENST00000614678 GNG13Q9P2W3 67 aa3.93□□□□□ -1.78
CPNE3-208ENST00000614678 RNF24Q9Y225 148 aa3.93□□□□□ -1.78
CPNE3-208ENST00000614678 EREGO14944 169 aa3.93□□□□□ -1.78
CPNE3-208ENST00000614678 P0DMU3 169 aa3.93□□□□□ -1.78
CPNE3-208ENST00000614678 FAM231AP0DMU4 169 aa3.93□□□□□ -1.78
CPNE3-208ENST00000614678 FAM231CP0DMU5 169 aa3.93□□□□□ -1.78
CPNE3-208ENST00000614678 CYB561D1Q8N8Q1 229 aa3.93□□□□□ -1.78
CPNE3-208ENST00000614678 ATG101Q9BSB4 218 aa3.93□□□□□ -1.78
CPNE3-208ENST00000614678 TRBV20OR9-2A0A075B6H5 130 aa3.93□□□□□ -1.78
CPNE3-208ENST00000614678 RAB19A4D1S5 217 aa3.93□□□□□ -1.78
CPNE3-208ENST00000614678 TAAR5O14804 337 aa3.93□□□□□ -1.78
CPNE3-208ENST00000614678 GZMBP10144 247 aa3.93□□□□□ -1.78
CPNE3-208ENST00000614678 DMRTA1Q5VZB9 504 aa3.93□□□□□ -1.78
CPNE3-208ENST00000614678 ZNRF2Q8NHG8 242 aa3.93□□□□□ -1.78
CPNE3-208ENST00000614678 ASB13Q8WXK3 278 aa3.93□□□□□ -1.78
CPNE3-208ENST00000614678 ABCA13Q86UQ4 5058 aa3.92□□□□□ -1.78
CPNE3-208ENST00000614678 A0A1W2PRE2 83 aa3.92□□□□□ -1.78
CPNE3-208ENST00000614678 MBP02144 154 aa3.92□□□□□ -1.78
CPNE3-208ENST00000614678 SEC11BP0C7V7 166 aa3.92□□□□□ -1.78
CPNE3-208ENST00000614678 S100A12P80511 92 aa3.92□□□□□ -1.78
CPNE3-208ENST00000614678 ZNF493Q6ZR52 646 aa3.92□□□□□ -1.78
CPNE3-208ENST00000614678 UBE2DNLQ8IWF7 75 aa3.92□□□□□ -1.78
CPNE3-208ENST00000614678 ZNF680Q8NEM1 530 aa3.92□□□□□ -1.78
CPNE3-208ENST00000614678 HERC2O95714 4834 aa3.92□□□□□ -1.78
CPNE3-208ENST00000614678 A0A0D9SG52 128 aa3.92□□□□□ -1.78
CPNE3-208ENST00000614678 H3BVH4 76 aa3.92□□□□□ -1.78
CPNE3-208ENST00000614678 SNAPINO95295 136 aa3.92□□□□□ -1.78
CPNE3-208ENST00000614678 PFN1P07737 140 aaKnown RBP3.92□□□□□ -1.78
CPNE3-208ENST00000614678 PRR27Q6MZM9 219 aa3.92□□□□□ -1.78
CPNE3-208ENST00000614678 DNAJC30Q96LL9 226 aa3.92□□□□□ -1.78
CPNE3-208ENST00000614678 TMEM167BQ9NRX6 74 aa3.92□□□□□ -1.78
CPNE3-208ENST00000614678 SH2D1AO60880 128 aa3.92□□□□□ -1.78
CPNE3-208ENST00000614678 MBD3L1Q8WWY6 194 aa3.92□□□□□ -1.78
CPNE3-208ENST00000614678 C20orf144Q9BQM9 153 aa3.92□□□□□ -1.78
CPNE3-208ENST00000614678 RYR1P21817 5038 aa3.92□□□□□ -1.78
CPNE3-208ENST00000614678 APOBP04114 4563 aaKnown RBP3.91□□□□□ -1.78
CPNE3-208ENST00000614678 ZNF876PQ49A33 203 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms