RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 PNRC1Q12796 327 aaPredicted RBP10.63□□□□□ -0.71
CD48-203ENST00000613788 ADIRFQ15847 76 aa10.63□□□□□ -0.71
CD48-203ENST00000613788 C11orf21Q9P2W6 132 aa10.63□□□□□ -0.71
CD48-203ENST00000613788 B4DEV8 164 aa10.63□□□□□ -0.71
CD48-203ENST00000613788 ERVFC1-1P60608 527 aa10.63□□□□□ -0.71
CD48-203ENST00000613788 IBA57Q5T440 356 aaKnown RBP10.63□□□□□ -0.71
CD48-203ENST00000613788 ZNF493Q6ZR52 646 aa10.63□□□□□ -0.71
CD48-203ENST00000613788 TRGV11A0A075B6L2 103 aa10.62□□□□□ -0.71
CD48-203ENST00000613788 IGKV3D-20A0A0C4DH25 116 aa10.62□□□□□ -0.71
CD48-203ENST00000613788 TMEM189A5PLL7 270 aa10.62□□□□□ -0.71
CD48-203ENST00000613788 KRBOX1C9JBD0 128 aa10.62□□□□□ -0.71
CD48-203ENST00000613788 M0R036 132 aa10.62□□□□□ -0.71
CD48-203ENST00000613788 ADCYAP1P18509 176 aa10.62□□□□□ -0.71
CD48-203ENST00000613788 S100A1P23297 94 aa10.62□□□□□ -0.71
CD48-203ENST00000613788 LINC01559Q495D7 138 aa10.62□□□□□ -0.71
CD48-203ENST00000613788 FAM231DQ6ZW35 169 aa10.62□□□□□ -0.71
CD48-203ENST00000613788 NUDT10Q8NFP7 164 aa10.62□□□□□ -0.71
CD48-203ENST00000613788 TMEM263Q8WUH6 116 aaKnown RBP10.62□□□□□ -0.71
CD48-203ENST00000613788 NUDT11Q96G61 164 aa10.62□□□□□ -0.71
CD48-203ENST00000613788 PRM2P04554 102 aa10.61□□□□□ -0.71
CD48-203ENST00000613788 AZU1P20160 251 aa10.61□□□□□ -0.71
CD48-203ENST00000613788 C15orf54Q8N8G6 183 aa10.61□□□□□ -0.71
CD48-203ENST00000613788 ISOC2Q96AB3 205 aa10.61□□□□□ -0.71
CD48-203ENST00000613788 C16orf74Q96GX8 76 aa10.61□□□□□ -0.71
CD48-203ENST00000613788 RNASE7Q9H1E1 156 aaKnown RBP10.61□□□□□ -0.71
CD48-203ENST00000613788 TP53TG3Q9ULZ0 132 aa10.61□□□□□ -0.71
CD48-203ENST00000613788 XKRY2A2RUG3 117 aa10.6□□□□□ -0.71
CD48-203ENST00000613788 GNRH2O43555 120 aa10.6□□□□□ -0.71
CD48-203ENST00000613788 GATCO43716 136 aaKnown RBP10.6□□□□□ -0.71
CD48-203ENST00000613788 RPS20P60866 119 aaKnown RBP10.6□□□□□ -0.71
CD48-203ENST00000613788 C10orf91Q5T1B1 145 aa10.6□□□□□ -0.71
CD48-203ENST00000613788 OR2D3Q8NGH3 330 aa10.6□□□□□ -0.71
CD48-203ENST00000613788 SFRP2Q96HF1 295 aa10.6□□□□□ -0.71
CD48-203ENST00000613788 OSTCQ9NRP0 149 aa10.6□□□□□ -0.71
CD48-203ENST00000613788 TMSB15BA0A087X1C1 80 aa10.59□□□□□ -0.71
CD48-203ENST00000613788 IGHV4-28A0A0C4DH34 117 aa10.59□□□□□ -0.71
CD48-203ENST00000613788 TYMSP04818 313 aa10.59□□□□□ -0.71
CD48-203ENST00000613788 Q8NAQ8 132 aa10.59□□□□□ -0.71
CD48-203ENST00000613788 RNASE8Q8TDE3 154 aaKnown RBP10.59□□□□□ -0.71
CD48-203ENST00000613788 CARHSP1Q9Y2V2 147 aaKnown RBP10.59□□□□□ -0.71
CD48-203ENST00000613788 NBEAL2Q6ZNJ1 2754 aa10.59□□□□□ -0.71
CD48-203ENST00000613788 SNURFLB1AK76 121 aa10.58□□□□□ -0.72
CD48-203ENST00000613788 CXCL1P09341 107 aa10.58□□□□□ -0.72
CD48-203ENST00000613788 S100A4P26447 101 aaKnown RBP10.58□□□□□ -0.72
CD48-203ENST00000613788 ASIPP42127 132 aa10.58□□□□□ -0.72
CD48-203ENST00000613788 RPL19P84098 196 aaKnown RBP10.58□□□□□ -0.72
CD48-203ENST00000613788 ZNF415Q09FC8 603 aa10.58□□□□□ -0.72
CD48-203ENST00000613788 DNLZQ5SXM8 178 aa10.58□□□□□ -0.72
CD48-203ENST00000613788 OR10G8Q8NGN5 311 aa10.58□□□□□ -0.72
CD48-203ENST00000613788 RPP21Q9H633 154 aaKnown RBP10.58□□□□□ -0.72
CD48-203ENST00000613788 IGHV3-16A0A0C4DH30 117 aa10.58□□□□□ -0.72
CD48-203ENST00000613788 GRIFINA4D1Z8 144 aa10.58□□□□□ -0.72
CD48-203ENST00000613788 GSN-AS1Q9NRJ2 163 aa10.58□□□□□ -0.72
CD48-203ENST00000613788 MDFICQ9P1T7 246 aa10.58□□□□□ -0.72
CD48-203ENST00000613788 TIMM8BQ9Y5J9 83 aaPredicted RBP10.58□□□□□ -0.72
CD48-203ENST00000613788 PRKDCP78527 4128 aaKnown RBP10.57□□□□□ -0.72
CD48-203ENST00000613788 DNAH9Q9NYC9 4486 aa10.57□□□□□ -0.72
CD48-203ENST00000613788 A8MWL6 223 aa10.57□□□□□ -0.72
CD48-203ENST00000613788 PPP1R2P9O14990 202 aa10.57□□□□□ -0.72
CD48-203ENST00000613788 MT-ND4LP03901 98 aa10.57□□□□□ -0.72
CD48-203ENST00000613788 EMP1P54849 157 aa10.57□□□□□ -0.72
CD48-203ENST00000613788 TCL1AP56279 114 aa10.57□□□□□ -0.72
CD48-203ENST00000613788 CT83Q5H943 113 aa10.57□□□□□ -0.72
CD48-203ENST00000613788 C11orf72Q8NBR9 251 aa10.57□□□□□ -0.72
CD48-203ENST00000613788 SPXQ9BT56 116 aa10.57□□□□□ -0.72
CD48-203ENST00000613788 C11orf68Q9H3H3 251 aaKnown RBP10.57□□□□□ -0.72
CD48-203ENST00000613788 FBN3Q75N90 2809 aa10.56□□□□□ -0.72
CD48-203ENST00000613788 DEFB4AO15263 64 aa10.56□□□□□ -0.72
CD48-203ENST00000613788 APOC3P02656 99 aa10.56□□□□□ -0.72
CD48-203ENST00000613788 ZNF575Q86XF7 245 aa10.56□□□□□ -0.72
CD48-203ENST00000613788 ANAPC16Q96DE5 110 aa10.56□□□□□ -0.72
CD48-203ENST00000613788 PLAC8L1A1L4L8 177 aa10.55□□□□□ -0.72
CD48-203ENST00000613788 ARMS2P0C7Q2 107 aa10.55□□□□□ -0.72
CD48-203ENST00000613788 RNASE3P12724 160 aaKnown RBP10.55□□□□□ -0.72
CD48-203ENST00000613788 DAZ2Q13117 558 aaKnown RBP10.55□□□□□ -0.72
CD48-203ENST00000613788 IL36BQ9NZH7 164 aa10.55□□□□□ -0.72
CD48-203ENST00000613788 U3KQK5 164 aa10.55□□□□□ -0.72
CD48-203ENST00000613788 V9GYV3 84 aa10.55□□□□□ -0.72
CD48-203ENST00000613788 HUWE1Q7Z6Z7 4374 aaKnown RBP10.54□□□□□ -0.72
CD48-203ENST00000613788 A0A0J9YWU9 116 aa10.54□□□□□ -0.72
CD48-203ENST00000613788 A0A1W2PPQ1 181 aa10.54□□□□□ -0.72
CD48-203ENST00000613788 MED14OSP0DP75 135 aa10.54□□□□□ -0.72
CD48-203ENST00000613788 RNF212Q495C1 297 aa10.54□□□□□ -0.72
CD48-203ENST00000613788 SVBPQ8N300 66 aa10.54□□□□□ -0.72
CD48-203ENST00000613788 NOP10Q9NPE3 64 aaKnown RBP10.54□□□□□ -0.72
CD48-203ENST00000613788 TEX48A0A1B0GUV7 120 aa10.53□□□□□ -0.72
CD48-203ENST00000613788 LYRM9A8MSI8 78 aa10.53□□□□□ -0.72
CD48-203ENST00000613788 H3BVH4 76 aa10.53□□□□□ -0.72
CD48-203ENST00000613788 SPART-AS1P0CW21 52 aa10.53□□□□□ -0.72
CD48-203ENST00000613788 GZMBP10144 247 aa10.53□□□□□ -0.72
CD48-203ENST00000613788 CLRN3Q8NCR9 226 aa10.53□□□□□ -0.72
CD48-203ENST00000613788 IL17DQ8TAD2 202 aa10.53□□□□□ -0.72
CD48-203ENST00000613788 TSKUQ8WUA8 353 aa10.53□□□□□ -0.72
CD48-203ENST00000613788 C9orf85Q96MD7 179 aa10.53□□□□□ -0.72
CD48-203ENST00000613788 FAM231BA6NCW3 169 aa10.53□□□□□ -0.72
CD48-203ENST00000613788 F2Z2F3 143 aa10.53□□□□□ -0.72
CD48-203ENST00000613788 SNAPINO95295 136 aa10.53□□□□□ -0.72
CD48-203ENST00000613788 LGALS9BQ3B8N2 356 aa10.53□□□□□ -0.72
CD48-203ENST00000613788 FER1L6-AS1Q8NA97 138 aa10.53□□□□□ -0.72
CD48-203ENST00000613788 SSBP4Q9BWG4 385 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms