RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 NTN3O00634 580 aaPredicted RBP3.95□□□□□ -1.78
VPS13D-213ENST00000613099 C16orf47Q6ZP98 133 aaPredicted RBP3.95□□□□□ -1.78
VPS13D-213ENST00000613099 IGKV1-12A0A0C4DH73 117 aa3.95□□□□□ -1.78
VPS13D-213ENST00000613099 IGKV1D-12P01611 117 aa3.95□□□□□ -1.78
VPS13D-213ENST00000613099 FAM201AQ5SY85 155 aa3.95□□□□□ -1.78
VPS13D-213ENST00000613099 FAM74A4Q5TZK3 123 aa3.95□□□□□ -1.78
VPS13D-213ENST00000613099 ADAMTS20P59510 1910 aa3.95□□□□□ -1.78
VPS13D-213ENST00000613099 SAA1P0DJI8 122 aaPredicted RBP3.95□□□□□ -1.78
VPS13D-213ENST00000613099 IGF2BP2-AS1Q96M15 143 aa3.95□□□□□ -1.78
VPS13D-213ENST00000613099 C1orf147Q96MC9 270 aaPredicted RBP3.95□□□□□ -1.78
VPS13D-213ENST00000613099 TP73-AS1Q9UF72 201 aa3.95□□□□□ -1.78
VPS13D-213ENST00000613099 OVOL1O14753 267 aa3.95□□□□□ -1.78
VPS13D-213ENST00000613099 HAMPP81172 84 aa3.95□□□□□ -1.78
VPS13D-213ENST00000613099 ORMDL1Q9P0S3 153 aa3.95□□□□□ -1.78
VPS13D-213ENST00000613099 A0A1B0GXF2 115 aa3.95□□□□□ -1.78
VPS13D-213ENST00000613099 E9PLN8 166 aa3.95□□□□□ -1.78
VPS13D-213ENST00000613099 ZFP2Q6ZN57 461 aa3.95□□□□□ -1.78
VPS13D-213ENST00000613099 APELAP0DMC3 54 aa3.94□□□□□ -1.78
VPS13D-213ENST00000613099 WIPF3A6NGB9 483 aa3.94□□□□□ -1.78
VPS13D-213ENST00000613099 SPTSSBQ8NFR3 76 aa3.94□□□□□ -1.78
VPS13D-213ENST00000613099 INSL3P51460 131 aa3.94□□□□□ -1.78
VPS13D-213ENST00000613099 MDFICQ9P1T7 246 aa3.94□□□□□ -1.78
VPS13D-213ENST00000613099 U3KQK5 164 aa3.94□□□□□ -1.78
VPS13D-213ENST00000613099 A0A0G2JRQ6 117 aa3.94□□□□□ -1.78
VPS13D-213ENST00000613099 MINOS1Q5TGZ0 78 aa3.94□□□□□ -1.78
VPS13D-213ENST00000613099 MINOS1-NBL1R4GNA1 71 aa3.94□□□□□ -1.78
VPS13D-213ENST00000613099 FOXF2Q12947 444 aa3.94□□□□□ -1.78
VPS13D-213ENST00000613099 C4orf51C9J302 202 aa3.94□□□□□ -1.78
VPS13D-213ENST00000613099 PRR7Q8TB68 274 aa3.94□□□□□ -1.78
VPS13D-213ENST00000613099 TMEM133Q9H2Q1 129 aa3.94□□□□□ -1.78
VPS13D-213ENST00000613099 M0R1W7 72 aa3.94□□□□□ -1.78
VPS13D-213ENST00000613099 C6orf226Q5I0X4 101 aa3.94□□□□□ -1.78
VPS13D-213ENST00000613099 ZNF625Q96I27 306 aaPredicted RBP3.94□□□□□ -1.78
VPS13D-213ENST00000613099 COX7A1P24310 79 aa3.94□□□□□ -1.78
VPS13D-213ENST00000613099 H0Y8X5 98 aa3.94□□□□□ -1.78
VPS13D-213ENST00000613099 CD24P25063 80 aa3.94□□□□□ -1.78
VPS13D-213ENST00000613099 IGFL3Q6UXB1 125 aa3.94□□□□□ -1.78
VPS13D-213ENST00000613099 PATE1Q8WXA2 126 aa3.94□□□□□ -1.78
VPS13D-213ENST00000613099 IGKV1D-43A0A0B4J1Z2 117 aa3.93□□□□□ -1.78
VPS13D-213ENST00000613099 DYNAPQ8N1N2 210 aa3.93□□□□□ -1.78
VPS13D-213ENST00000613099 TRBV30A0A0K0K1B3 111 aa3.93□□□□□ -1.78
VPS13D-213ENST00000613099 TRBV6-1A0A0K0K1D8 114 aa3.93□□□□□ -1.78
VPS13D-213ENST00000613099 LOC107984640A0A0U1RRK4 108 aa3.93□□□□□ -1.78
VPS13D-213ENST00000613099 TMEM89A2RUT3 159 aa3.93□□□□□ -1.78
VPS13D-213ENST00000613099 PMS2P5A8MQ11 134 aa3.93□□□□□ -1.78
VPS13D-213ENST00000613099 NBL1P41271 181 aa3.93□□□□□ -1.78
VPS13D-213ENST00000613099 FXYD5Q96DB9 178 aa3.93□□□□□ -1.78
VPS13D-213ENST00000613099 USMG5Q96IX5 58 aa3.93□□□□□ -1.78
VPS13D-213ENST00000613099 IGHV3-64A0A075B6Q5 118 aa3.93□□□□□ -1.78
VPS13D-213ENST00000613099 MP68P56378 58 aa3.93□□□□□ -1.78
VPS13D-213ENST00000613099 C20orf197Q8N268 126 aa3.93□□□□□ -1.78
VPS13D-213ENST00000613099 CEP295Q9C0D2 2601 aa3.93□□□□□ -1.78
VPS13D-213ENST00000613099 SAA2P0DJI9 122 aaPredicted RBP3.93□□□□□ -1.78
VPS13D-213ENST00000613099 HTN1P15515 57 aa3.93□□□□□ -1.78
VPS13D-213ENST00000613099 IGHV5-51A0A0C4DH38 117 aa3.93□□□□□ -1.78
VPS13D-213ENST00000613099 IGKV1-6A0A0C4DH72 117 aa3.93□□□□□ -1.78
VPS13D-213ENST00000613099 TP53TG1Q9Y2A0 90 aa3.93□□□□□ -1.78
VPS13D-213ENST00000613099 Q6ZS52 159 aa3.93□□□□□ -1.78
VPS13D-213ENST00000613099 CCL17Q92583 94 aa3.93□□□□□ -1.78
VPS13D-213ENST00000613099 ZNF576Q9H609 170 aa3.93□□□□□ -1.78
VPS13D-213ENST00000613099 PRSS22Q9GZN4 317 aa3.93□□□□□ -1.78
VPS13D-213ENST00000613099 TECTAO75443 2155 aa3.93□□□□□ -1.78
VPS13D-213ENST00000613099 IGKV2-40A0A087WW87 121 aaPredicted RBP3.93□□□□□ -1.78
VPS13D-213ENST00000613099 IGKV2D-40P01614 121 aaPredicted RBP3.93□□□□□ -1.78
VPS13D-213ENST00000613099 CRYGAP11844 174 aa3.93□□□□□ -1.78
VPS13D-213ENST00000613099 ABCA12Q86UK0 2595 aa3.93□□□□□ -1.78
VPS13D-213ENST00000613099 NXPH4O95158 308 aa3.93□□□□□ -1.78
VPS13D-213ENST00000613099 KLF14Q8TD94 323 aaPredicted RBP3.93□□□□□ -1.78
VPS13D-213ENST00000613099 PRR20EP86478 221 aa3.93□□□□□ -1.78
VPS13D-213ENST00000613099 PRR20CP86479 221 aa3.93□□□□□ -1.78
VPS13D-213ENST00000613099 PRR20DP86480 221 aa3.93□□□□□ -1.78
VPS13D-213ENST00000613099 PRR20BP86481 221 aa3.93□□□□□ -1.78
VPS13D-213ENST00000613099 PRR20AP86496 221 aa3.93□□□□□ -1.78
VPS13D-213ENST00000613099 PIK3CD-AS1Q5SR53 167 aa3.93□□□□□ -1.78
VPS13D-213ENST00000613099 COL4A3Q01955 1670 aa3.93□□□□□ -1.78
VPS13D-213ENST00000613099 USP17L23D6RBM5 183 aa3.93□□□□□ -1.78
VPS13D-213ENST00000613099 JMJD7-PLA2G4BH0Y9G9 81 aa3.93□□□□□ -1.78
VPS13D-213ENST00000613099 UBE2BP63146 152 aa3.93□□□□□ -1.78
VPS13D-213ENST00000613099 CCL13Q99616 98 aa3.93□□□□□ -1.78
VPS13D-213ENST00000613099 PROP1O75360 226 aa3.92□□□□□ -1.78
VPS13D-213ENST00000613099 PRIMA1Q86XR5 153 aa3.92□□□□□ -1.78
VPS13D-213ENST00000613099 C14orf178Q8N769 122 aaPredicted RBP3.92□□□□□ -1.78
VPS13D-213ENST00000613099 MPLKIPQ8TAP9 179 aa3.92□□□□□ -1.78
VPS13D-213ENST00000613099 TOMM6Q96B49 74 aa3.92□□□□□ -1.78
VPS13D-213ENST00000613099 TRBV7-7A0A0K0K1E9 115 aa3.92□□□□□ -1.78
VPS13D-213ENST00000613099 GDF5OSQ5U4N7 250 aa3.92□□□□□ -1.78
VPS13D-213ENST00000613099 UPK3BQ9BT76 320 aa3.92□□□□□ -1.78
VPS13D-213ENST00000613099 A0A0J9YXY3 114 aa3.92□□□□□ -1.78
VPS13D-213ENST00000613099 MBD3L4A6NDZ8 208 aaPredicted RBP3.92□□□□□ -1.78
VPS13D-213ENST00000613099 MBD3L3A6NE82 208 aaPredicted RBP3.92□□□□□ -1.78
VPS13D-213ENST00000613099 MBD3L5A6NJ08 208 aaPredicted RBP3.92□□□□□ -1.78
VPS13D-213ENST00000613099 ECSCRQ19T08 205 aa3.92□□□□□ -1.78
VPS13D-213ENST00000613099 Q6ZR03 302 aa3.92□□□□□ -1.78
VPS13D-213ENST00000613099 GATA4P43694 442 aa3.92□□□□□ -1.78
VPS13D-213ENST00000613099 FGFBP3Q8TAT2 258 aa3.92□□□□□ -1.78
VPS13D-213ENST00000613099 AJUBAQ96IF1 538 aa3.92□□□□□ -1.78
VPS13D-213ENST00000613099 DEFB123Q8N688 67 aa3.92□□□□□ -1.78
VPS13D-213ENST00000613099 IGHV1-69DA0A0B4J2H0 117 aa3.92□□□□□ -1.78
VPS13D-213ENST00000613099 TRGV5A0A0B4J1U4 118 aa3.92□□□□□ -1.78
VPS13D-213ENST00000613099 K7EM74 188 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms