RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 ATP5SQ99766 215 aa11.29□□□□□ -0.6
CSNK1E-215ENST00000612795 COX11Q9Y6N1 276 aa11.29□□□□□ -0.6
CSNK1E-215ENST00000612795 TRBV6-4A0A1B0GX49 114 aa11.28□□□□□ -0.6
CSNK1E-215ENST00000612795 FAM25EA8MYX2 175 aa11.28□□□□□ -0.6
CSNK1E-215ENST00000612795 H3BMQ9 156 aa11.28□□□□□ -0.6
CSNK1E-215ENST00000612795 GNRH2O43555 120 aa11.28□□□□□ -0.6
CSNK1E-215ENST00000612795 SULT1A1P50225 295 aa11.28□□□□□ -0.6
CSNK1E-215ENST00000612795 RPL37AP61513 92 aaKnown RBP11.28□□□□□ -0.6
CSNK1E-215ENST00000612795 Q8N976 141 aa11.28□□□□□ -0.6
CSNK1E-215ENST00000612795 CHAC2Q8WUX2 184 aa11.28□□□□□ -0.6
CSNK1E-215ENST00000612795 MITD1Q8WV92 249 aa11.28□□□□□ -0.6
CSNK1E-215ENST00000612795 FXYD5Q96DB9 178 aa11.28□□□□□ -0.6
CSNK1E-215ENST00000612795 PAXXQ9BUH6 204 aa11.28□□□□□ -0.6
CSNK1E-215ENST00000612795 NPCDR1Q9BY65 106 aa11.28□□□□□ -0.6
CSNK1E-215ENST00000612795 LENEPQ9Y5L5 61 aa11.28□□□□□ -0.6
CSNK1E-215ENST00000612795 GGTLC3B5MD39 225 aa11.27□□□□□ -0.61
CSNK1E-215ENST00000612795 TYMSP04818 313 aa11.27□□□□□ -0.61
CSNK1E-215ENST00000612795 RANP62826 216 aaKnown RBP11.27□□□□□ -0.61
CSNK1E-215ENST00000612795 DAZ4Q86SG3 579 aaKnown RBP11.27□□□□□ -0.61
CSNK1E-215ENST00000612795 RMI2Q96E14 147 aa11.27□□□□□ -0.61
CSNK1E-215ENST00000612795 SDF2L1Q9HCN8 221 aa11.27□□□□□ -0.61
CSNK1E-215ENST00000612795 DAZ3Q9NR90 486 aaKnown RBP11.27□□□□□ -0.61
CSNK1E-215ENST00000612795 IGHV3-73A0A0B4J1V6 119 aa11.26□□□□□ -0.61
CSNK1E-215ENST00000612795 OR7C2O60412 319 aa11.26□□□□□ -0.61
CSNK1E-215ENST00000612795 S100A10P60903 97 aa11.26□□□□□ -0.61
CSNK1E-215ENST00000612795 TRIQKQ629K1 86 aa11.26□□□□□ -0.61
CSNK1E-215ENST00000612795 SH3BGRL3Q9H299 93 aa11.26□□□□□ -0.61
CSNK1E-215ENST00000612795 LYRM2Q9NU23 88 aaPredicted RBP11.26□□□□□ -0.61
CSNK1E-215ENST00000612795 TRAV21A0A0B4J279 112 aa11.25□□□□□ -0.61
CSNK1E-215ENST00000612795 IGSF23A1L1A6 192 aa11.25□□□□□ -0.61
CSNK1E-215ENST00000612795 CIDEAO60543 219 aa11.25□□□□□ -0.61
CSNK1E-215ENST00000612795 ZNF876PQ49A33 203 aa11.25□□□□□ -0.61
CSNK1E-215ENST00000612795 TMEM252Q8N6L7 170 aa11.25□□□□□ -0.61
CSNK1E-215ENST00000612795 C11orf1Q9H5F2 150 aa11.25□□□□□ -0.61
CSNK1E-215ENST00000612795 ATP6V1FQ16864 119 aa11.24□□□□□ -0.61
CSNK1E-215ENST00000612795 SPANXN2Q5MJ10 180 aa11.24□□□□□ -0.61
CSNK1E-215ENST00000612795 CFAP126Q5VTH2 177 aa11.24□□□□□ -0.61
CSNK1E-215ENST00000612795 KCNS1Q96KK3 526 aa11.24□□□□□ -0.61
CSNK1E-215ENST00000612795 RPH3ALQ9UNE2 315 aa11.24□□□□□ -0.61
CSNK1E-215ENST00000612795 IGKV2D-24A0A075B6R9 120 aa11.23□□□□□ -0.61
CSNK1E-215ENST00000612795 DIRC3C9JPN6 131 aa11.23□□□□□ -0.61
CSNK1E-215ENST00000612795 F6UZH7 168 aa11.23□□□□□ -0.61
CSNK1E-215ENST00000612795 IGLV2-11P01706 119 aa11.23□□□□□ -0.61
CSNK1E-215ENST00000612795 HNRNPA3P51991 378 aaKnown RBP11.23□□□□□ -0.61
CSNK1E-215ENST00000612795 UBE2L3P68036 154 aaKnown RBP11.23□□□□□ -0.61
CSNK1E-215ENST00000612795 TMED6Q8WW62 240 aa11.23□□□□□ -0.61
CSNK1E-215ENST00000612795 ASB13Q8WXK3 278 aa11.23□□□□□ -0.61
CSNK1E-215ENST00000612795 RNF222A6NCQ9 220 aa11.22□□□□□ -0.61
CSNK1E-215ENST00000612795 CENPXA8MT69 81 aa11.22□□□□□ -0.61
CSNK1E-215ENST00000612795 MGST1P10620 155 aaKnown RBP11.22□□□□□ -0.61
CSNK1E-215ENST00000612795 THAP6Q8TBB0 222 aa11.22□□□□□ -0.61
CSNK1E-215ENST00000612795 HYLS1Q96M11 299 aa11.22□□□□□ -0.61
CSNK1E-215ENST00000612795 KCNIP2Q9NS61 270 aa11.22□□□□□ -0.61
CSNK1E-215ENST00000612795 URGCP-MRPS24S4R325 110 aa11.22□□□□□ -0.61
CSNK1E-215ENST00000612795 TRAV8-1A0A0A6YYK1 113 aa11.21□□□□□ -0.61
CSNK1E-215ENST00000612795 BTCP35070 178 aa11.21□□□□□ -0.61
CSNK1E-215ENST00000612795 DPPA3Q6W0C5 159 aa11.21□□□□□ -0.61
CSNK1E-215ENST00000612795 GAGE12JA6NER3 117 aa11.2□□□□□ -0.62
CSNK1E-215ENST00000612795 GAGE1Q13065 139 aa11.2□□□□□ -0.62
CSNK1E-215ENST00000612795 GAGE4Q13068 117 aa11.2□□□□□ -0.62
CSNK1E-215ENST00000612795 GAGE5Q13069 117 aa11.2□□□□□ -0.62
CSNK1E-215ENST00000612795 GAGE13Q4V321 117 aa11.2□□□□□ -0.62
CSNK1E-215ENST00000612795 CMTM2Q8TAZ6 248 aa11.2□□□□□ -0.62
CSNK1E-215ENST00000612795 DAZAP1Q96EP5 407 aaKnown RBP11.2□□□□□ -0.62
CSNK1E-215ENST00000612795 C2orf50Q96LR7 162 aa11.2□□□□□ -0.62
CSNK1E-215ENST00000612795 TREM1Q9NP99 234 aa11.2□□□□□ -0.62
CSNK1E-215ENST00000612795 SEC11BP0C7V7 166 aa11.19□□□□□ -0.62
CSNK1E-215ENST00000612795 RAB32Q13637 225 aa11.19□□□□□ -0.62
CSNK1E-215ENST00000612795 NMES1Q9C002 83 aa11.19□□□□□ -0.62
CSNK1E-215ENST00000612795 A0A087WWC5 75 aa11.18□□□□□ -0.62
CSNK1E-215ENST00000612795 CNPY1Q3B7I2 92 aa11.18□□□□□ -0.62
CSNK1E-215ENST00000612795 FAM74A1Q5RGS3 127 aa11.18□□□□□ -0.62
CSNK1E-215ENST00000612795 OR5C1Q8NGR4 320 aa11.18□□□□□ -0.62
CSNK1E-215ENST00000612795 RNF213Q63HN8 5207 aa11.17□□□□□ -0.62
CSNK1E-215ENST00000612795 MT1HL1P0DM35 61 aa11.17□□□□□ -0.62
CSNK1E-215ENST00000612795 C14orf177Q52M58 125 aa11.17□□□□□ -0.62
CSNK1E-215ENST00000612795 KHDC3LQ587J8 217 aa11.17□□□□□ -0.62
CSNK1E-215ENST00000612795 ZNF506Q5JVG8 444 aa11.17□□□□□ -0.62
CSNK1E-215ENST00000612795 GOLT1AQ6ZVE7 132 aa11.17□□□□□ -0.62
CSNK1E-215ENST00000612795 DNAJC30Q96LL9 226 aa11.17□□□□□ -0.62
CSNK1E-215ENST00000612795 OTORQ9NRC9 128 aa11.17□□□□□ -0.62
CSNK1E-215ENST00000612795 KLK12Q9UKR0 248 aa11.17□□□□□ -0.62
CSNK1E-215ENST00000612795 LINC00694P0DN24 101 aa11.16□□□□□ -0.62
CSNK1E-215ENST00000612795 CYB561D1Q8N8Q1 229 aa11.16□□□□□ -0.62
CSNK1E-215ENST00000612795 UBE2WQ96B02 151 aa11.16□□□□□ -0.62
CSNK1E-215ENST00000612795 PGPA6NDG6 321 aa11.15□□□□□ -0.62
CSNK1E-215ENST00000612795 PGPEP1LA6NFU8 196 aa11.15□□□□□ -0.62
CSNK1E-215ENST00000612795 C17orf112F2Z3M2 114 aa11.15□□□□□ -0.62
CSNK1E-215ENST00000612795 TAS2R45P59539 299 aa11.15□□□□□ -0.62
CSNK1E-215ENST00000612795 NHLH2Q02577 135 aa11.15□□□□□ -0.62
CSNK1E-215ENST00000612795 TVP23CQ96ET8 276 aa11.15□□□□□ -0.62
CSNK1E-215ENST00000612795 C9orf85Q96MD7 179 aa11.15□□□□□ -0.62
CSNK1E-215ENST00000612795 SEC22CQ9BRL7 303 aa11.15□□□□□ -0.62
CSNK1E-215ENST00000612795 NDFIP1Q9BT67 221 aa11.15□□□□□ -0.62
CSNK1E-215ENST00000612795 LRP2P98164 4655 aa11.14□□□□□ -0.63
CSNK1E-215ENST00000612795 CCDC160A6NGH7 325 aa11.14□□□□□ -0.63
CSNK1E-215ENST00000612795 NIT1Q86X76 327 aa11.14□□□□□ -0.63
CSNK1E-215ENST00000612795 WDR61Q9GZS3 305 aaKnown RBP11.14□□□□□ -0.63
CSNK1E-215ENST00000612795 TRAV6A0A075B6T7 132 aa11.13□□□□□ -0.63
CSNK1E-215ENST00000612795 ELOBQ15370 118 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms