RNA–Protein interactions for RNA: ENST00000611659.4

TPM3-223, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 3,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-223ENST00000611659 ZNF815PA8K554 130 aa9.18□□□□□ -0.94
TPM3-223ENST00000611659 TGFAP01135 160 aa9.18□□□□□ -0.94
TPM3-223ENST00000611659 LGALS1P09382 135 aaKnown RBP9.18□□□□□ -0.94
TPM3-223ENST00000611659 SPINK8P0C7L1 97 aa9.18□□□□□ -0.94
TPM3-223ENST00000611659 MRAP2Q96G30 205 aa9.18□□□□□ -0.94
TPM3-223ENST00000611659 ZNF48Q96MX3 618 aaPredicted RBP9.18□□□□□ -0.94
TPM3-223ENST00000611659 ASH1LQ9NR48 2969 aaKnown RBP9.18□□□□□ -0.94
TPM3-223ENST00000611659 IGHV7-4-1A0A0J9YVY3 117 aa9.18□□□□□ -0.94
TPM3-223ENST00000611659 CLEC3BP05452 202 aa9.18□□□□□ -0.94
TPM3-223ENST00000611659 ECSCRQ19T08 205 aa9.18□□□□□ -0.94
TPM3-223ENST00000611659 ZFP2Q6ZN57 461 aa9.18□□□□□ -0.94
TPM3-223ENST00000611659 DLX4Q92988 240 aaPredicted RBP9.18□□□□□ -0.94
TPM3-223ENST00000611659 PSMG3-AS1Q96PY0 264 aa9.18□□□□□ -0.94
TPM3-223ENST00000611659 PRADC1Q9BSG0 188 aa9.18□□□□□ -0.94
TPM3-223ENST00000611659 C1QTNF4Q9BXJ3 329 aa9.18□□□□□ -0.94
TPM3-223ENST00000611659 C15orf32Q32M92 178 aa9.17□□□□□ -0.94
TPM3-223ENST00000611659 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.17□□□□□ -0.94
TPM3-223ENST00000611659 SMIM2Q9BVW6 85 aa9.17□□□□□ -0.94
TPM3-223ENST00000611659 B9A039 149 aa9.17□□□□□ -0.94
TPM3-223ENST00000611659 NFE4Q86UQ8 179 aa9.17□□□□□ -0.94
TPM3-223ENST00000611659 BSNQ9UPA5 3926 aa9.17□□□□□ -0.94
TPM3-223ENST00000611659 DCHS2Q6V1P9 2916 aa9.16□□□□□ -0.94
TPM3-223ENST00000611659 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.16□□□□□ -0.94
TPM3-223ENST00000611659 BUB3O43684 328 aa9.16□□□□□ -0.94
TPM3-223ENST00000611659 CRYBA4P53673 196 aa9.16□□□□□ -0.94
TPM3-223ENST00000611659 PRR30Q53SZ7 412 aaPredicted RBP9.16□□□□□ -0.94
TPM3-223ENST00000611659 C8orf86Q6ZUL3 223 aa9.16□□□□□ -0.94
TPM3-223ENST00000611659 KLHL30-AS1Q8NEE0 82 aa9.16□□□□□ -0.94
TPM3-223ENST00000611659 MT-ATP8P03928 68 aa9.16□□□□□ -0.94
TPM3-223ENST00000611659 CD3EP07766 207 aa9.16□□□□□ -0.94
TPM3-223ENST00000611659 SLC25A16P16260 332 aa9.16□□□□□ -0.94
TPM3-223ENST00000611659 SMCPP49901 116 aaPredicted RBP9.16□□□□□ -0.94
TPM3-223ENST00000611659 EMP1P54849 157 aa9.16□□□□□ -0.94
TPM3-223ENST00000611659 TCTEX1D4Q5JR98 221 aa9.16□□□□□ -0.94
TPM3-223ENST00000611659 CFAP126Q5VTH2 177 aa9.16□□□□□ -0.94
TPM3-223ENST00000611659 PLEKHB2Q96CS7 222 aa9.16□□□□□ -0.94
TPM3-223ENST00000611659 RPL39LQ96EH5 51 aaKnown RBP9.16□□□□□ -0.94
TPM3-223ENST00000611659 TMEM238LA0A1B0GVL6 79 aa9.16□□□□□ -0.94
TPM3-223ENST00000611659 A6NJY4 79 aa9.16□□□□□ -0.94
TPM3-223ENST00000611659 MGPP08493 103 aa9.16□□□□□ -0.94
TPM3-223ENST00000611659 ZNF672Q499Z4 452 aaPredicted RBP9.16□□□□□ -0.94
TPM3-223ENST00000611659 AKAP6Q13023 2319 aa9.15□□□□□ -0.94
TPM3-223ENST00000611659 CLEC19AQ6UXS0 136 aa9.15□□□□□ -0.94
TPM3-223ENST00000611659 LINC01560Q8TB33 94 aa9.15□□□□□ -0.94
TPM3-223ENST00000611659 TRAV12-1A0A0B4J245 112 aa9.15□□□□□ -0.95
TPM3-223ENST00000611659 S100A4P26447 101 aaKnown RBP9.15□□□□□ -0.95
TPM3-223ENST00000611659 SUMO2P61956 95 aaKnown RBP9.15□□□□□ -0.95
TPM3-223ENST00000611659 ORMDL2Q53FV1 153 aa9.15□□□□□ -0.95
TPM3-223ENST00000611659 C14orf178Q8N769 122 aaPredicted RBP9.15□□□□□ -0.95
TPM3-223ENST00000611659 SLC50A1Q9BRV3 221 aa9.15□□□□□ -0.95
TPM3-223ENST00000611659 TSPAN13O95857 204 aa9.14□□□□□ -0.95
TPM3-223ENST00000611659 C2orf66Q6UXQ4 117 aa9.14□□□□□ -0.95
TPM3-223ENST00000611659 OR11H6Q8NGC7 330 aa9.14□□□□□ -0.95
TPM3-223ENST00000611659 CDIP1Q9H305 208 aa9.14□□□□□ -0.95
TPM3-223ENST00000611659 RBAKDNA6NC62 111 aa9.14□□□□□ -0.95
TPM3-223ENST00000611659 PRSS29PA6NIE9 313 aa9.14□□□□□ -0.95
TPM3-223ENST00000611659 LINC01548A6NM66 108 aa9.14□□□□□ -0.95
TPM3-223ENST00000611659 NEXN-AS1Q8NBZ9 246 aa9.14□□□□□ -0.95
TPM3-223ENST00000611659 IGF1P05019 195 aa9.14□□□□□ -0.95
TPM3-223ENST00000611659 FHL3Q13643 280 aa9.14□□□□□ -0.95
TPM3-223ENST00000611659 BAALCQ8WXS3 180 aa9.14□□□□□ -0.95
TPM3-223ENST00000611659 MSRB2Q9Y3D2 182 aa9.14□□□□□ -0.95
TPM3-223ENST00000611659 IGHV7-81A0A0B4J1V7 117 aa9.13□□□□□ -0.95
TPM3-223ENST00000611659 TOMM6Q96B49 74 aa9.13□□□□□ -0.95
TPM3-223ENST00000611659 ATRXP46100 2492 aa9.13□□□□□ -0.95
TPM3-223ENST00000611659 PRSS47A8MTI9 375 aa9.13□□□□□ -0.95
TPM3-223ENST00000611659 XGP55808 180 aa9.13□□□□□ -0.95
TPM3-223ENST00000611659 ZFAND3Q9H8U3 227 aa9.13□□□□□ -0.95
TPM3-223ENST00000611659 TRAV8-2A0A0B4J237 113 aa9.12□□□□□ -0.95
TPM3-223ENST00000611659 PRR9Q5T870 116 aa9.12□□□□□ -0.95
TPM3-223ENST00000611659 VMO1Q7Z5L0 202 aa9.12□□□□□ -0.95
TPM3-223ENST00000611659 RASL10AQ92737 203 aa9.12□□□□□ -0.95
TPM3-223ENST00000611659 C16orf92Q96LL3 132 aa9.12□□□□□ -0.95
TPM3-223ENST00000611659 MUC6Q6W4X9 2439 aa9.12□□□□□ -0.95
TPM3-223ENST00000611659 SCGB1C2P0DMR2 95 aa9.12□□□□□ -0.95
TPM3-223ENST00000611659 LY6G5BQ8NDX9 201 aa9.12□□□□□ -0.95
TPM3-223ENST00000611659 COL6A6A6NMZ7 2263 aa9.12□□□□□ -0.95
TPM3-223ENST00000611659 Q6ZUT4 128 aa9.11□□□□□ -0.95
TPM3-223ENST00000611659 PHLDA3Q9Y5J5 127 aa9.11□□□□□ -0.95
TPM3-223ENST00000611659 METTL26Q96S19 204 aa9.11□□□□□ -0.95
TPM3-223ENST00000611659 CLPSL1A2RUU4 121 aa9.11□□□□□ -0.95
TPM3-223ENST00000611659 LINC01619G3V211 115 aa9.11□□□□□ -0.95
TPM3-223ENST00000611659 G3V318 75 aa9.11□□□□□ -0.95
TPM3-223ENST00000611659 ARL3P36405 182 aa9.11□□□□□ -0.95
TPM3-223ENST00000611659 DEFB1P60022 68 aa9.11□□□□□ -0.95
TPM3-223ENST00000611659 SPTBN1Q01082 2364 aaKnown RBP9.1□□□□□ -0.95
TPM3-223ENST00000611659 PRTN3P24158 256 aa9.1□□□□□ -0.95
TPM3-223ENST00000611659 ATP6V0E2Q8NHE4 81 aa9.1□□□□□ -0.95
TPM3-223ENST00000611659 ODF3BA8MYP8 253 aa9.1□□□□□ -0.95
TPM3-223ENST00000611659 ATP6V0E1O15342 81 aa9.1□□□□□ -0.95
TPM3-223ENST00000611659 DUSP14O95147 198 aaKnown RBP9.1□□□□□ -0.95
TPM3-223ENST00000611659 TCL1BO95988 128 aa9.1□□□□□ -0.95
TPM3-223ENST00000611659 UBE2D1P51668 147 aa9.1□□□□□ -0.95
TPM3-223ENST00000611659 PPDPFLQ8WWR9 84 aa9.09□□□□□ -0.95
TPM3-223ENST00000611659 TIMD4Q96H15 378 aa9.09□□□□□ -0.95
TPM3-223ENST00000611659 CARD19Q96LW7 228 aa9.09□□□□□ -0.95
TPM3-223ENST00000611659 KIR2DL4Q99706 377 aa9.09□□□□□ -0.95
TPM3-223ENST00000611659 DPH3P1Q9H4G8 78 aa9.09□□□□□ -0.95
TPM3-223ENST00000611659 FAM90A27PA6NNH2 459 aa9.09□□□□□ -0.95
TPM3-223ENST00000611659 TEN1Q86WV5 123 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms