RNA–Protein interactions for RNA: ENST00000609107.1

LINC02538-201, Transcript of long intergenic non-protein coding RNA 2538, humanhuman

TSL 2 BASIC

Gene LINC02538, Length 4,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02538-201ENST00000609107 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.11□□□□□ -0.63
LINC02538-201ENST00000609107 IGHV3-73A0A0B4J1V6 119 aa11.11□□□□□ -0.63
LINC02538-201ENST00000609107 LCNL1Q6ZST4 164 aa11.11□□□□□ -0.63
LINC02538-201ENST00000609107 DKK2Q9UBU2 259 aa11.11□□□□□ -0.63
LINC02538-201ENST00000609107 SPINK13Q1W4C9 94 aa11.11□□□□□ -0.63
LINC02538-201ENST00000609107 C5orf56Q8N8D9 126 aa11.11□□□□□ -0.63
LINC02538-201ENST00000609107 IGHV3-64A0A075B6Q5 118 aa11.11□□□□□ -0.63
LINC02538-201ENST00000609107 IGHV4-61A0A0C4DH41 118 aa11.11□□□□□ -0.63
LINC02538-201ENST00000609107 K7EMI3 77 aa11.11□□□□□ -0.63
LINC02538-201ENST00000609107 KLHL30-AS1Q8NEE0 82 aa11.11□□□□□ -0.63
LINC02538-201ENST00000609107 ERG28Q9UKR5 140 aa11.11□□□□□ -0.63
LINC02538-201ENST00000609107 CEP350Q5VT06 3117 aa11.11□□□□□ -0.63
LINC02538-201ENST00000609107 HLA-DRB4P13762 266 aa11.1□□□□□ -0.63
LINC02538-201ENST00000609107 PMVKQ15126 192 aa11.1□□□□□ -0.63
LINC02538-201ENST00000609107 SP5Q6BEB4 398 aaPredicted RBP11.1□□□□□ -0.63
LINC02538-201ENST00000609107 C11orf44Q8N8P7 122 aa11.1□□□□□ -0.63
LINC02538-201ENST00000609107 HLA-DRB4X5D2U9 266 aa11.1□□□□□ -0.63
LINC02538-201ENST00000609107 SDHAF1A6NFY7 115 aa11.1□□□□□ -0.63
LINC02538-201ENST00000609107 IGHV4-39P01824 125 aa11.1□□□□□ -0.63
LINC02538-201ENST00000609107 CTRLP40313 264 aa11.1□□□□□ -0.63
LINC02538-201ENST00000609107 ELANEP08246 267 aa11.1□□□□□ -0.63
LINC02538-201ENST00000609107 EMP1P54849 157 aa11.1□□□□□ -0.63
LINC02538-201ENST00000609107 HCFC1P51610 2035 aa11.1□□□□□ -0.63
LINC02538-201ENST00000609107 TMEM262E9PQX1 116 aa11.09□□□□□ -0.63
LINC02538-201ENST00000609107 CCL25O15444 150 aa11.09□□□□□ -0.63
LINC02538-201ENST00000609107 RPL36AP83881 106 aaKnown RBP11.09□□□□□ -0.63
LINC02538-201ENST00000609107 LINC00322Q6ZN03 302 aaPredicted RBP11.09□□□□□ -0.63
LINC02538-201ENST00000609107 RPL36ALQ969Q0 106 aaKnown RBP11.09□□□□□ -0.63
LINC02538-201ENST00000609107 A0A087WX48 190 aa11.09□□□□□ -0.63
LINC02538-201ENST00000609107 A8MWV9 139 aa11.09□□□□□ -0.63
LINC02538-201ENST00000609107 ZNF493Q6ZR52 646 aa11.09□□□□□ -0.63
LINC02538-201ENST00000609107 PTPRQQ9UMZ3 2332 aa11.08□□□□□ -0.63
LINC02538-201ENST00000609107 RHODO00212 210 aa11.08□□□□□ -0.64
LINC02538-201ENST00000609107 MSRB1Q9NZV6 116 aa11.08□□□□□ -0.64
LINC02538-201ENST00000609107 TAL2Q16559 108 aa11.08□□□□□ -0.64
LINC02538-201ENST00000609107 DLX4Q92988 240 aaPredicted RBP11.08□□□□□ -0.64
LINC02538-201ENST00000609107 CLUHP3Q96NS8 147 aa11.08□□□□□ -0.64
LINC02538-201ENST00000609107 DEFB125Q8N687 156 aa11.08□□□□□ -0.64
LINC02538-201ENST00000609107 PGPEP1Q9NXJ5 209 aa11.08□□□□□ -0.64
LINC02538-201ENST00000609107 MYMXA0A1B0GTQ4 84 aa11.08□□□□□ -0.64
LINC02538-201ENST00000609107 PRAC2D3DTV9 90 aa11.08□□□□□ -0.64
LINC02538-201ENST00000609107 LY6LH3BQJ8 138 aa11.08□□□□□ -0.64
LINC02538-201ENST00000609107 MYCNOSP40205 109 aa11.08□□□□□ -0.64
LINC02538-201ENST00000609107 SRSF2Q01130 221 aaKnown RBP11.08□□□□□ -0.64
LINC02538-201ENST00000609107 GDF5OSQ5U4N7 250 aa11.08□□□□□ -0.64
LINC02538-201ENST00000609107 TOMM7Q9P0U1 55 aa11.08□□□□□ -0.64
LINC02538-201ENST00000609107 KLK9Q9UKQ9 250 aa11.08□□□□□ -0.64
LINC02538-201ENST00000609107 IGKV3D-20A0A0C4DH25 116 aa11.07□□□□□ -0.64
LINC02538-201ENST00000609107 TRGV4A0A0C4DH28 118 aa11.07□□□□□ -0.64
LINC02538-201ENST00000609107 LINC01619G3V211 115 aa11.07□□□□□ -0.64
LINC02538-201ENST00000609107 DNAL4O96015 105 aa11.07□□□□□ -0.64
LINC02538-201ENST00000609107 TCTEX1D4Q5JR98 221 aa11.07□□□□□ -0.64
LINC02538-201ENST00000609107 C1orf159Q96HA4 380 aa11.07□□□□□ -0.64
LINC02538-201ENST00000609107 C9orf47Q6ZRZ4 202 aa11.07□□□□□ -0.64
LINC02538-201ENST00000609107 SCRT2Q9NQ03 307 aa11.07□□□□□ -0.64
LINC02538-201ENST00000609107 TRGV1A0A0A0MS02 117 aa11.07□□□□□ -0.64
LINC02538-201ENST00000609107 C2orf70A6NJV1 201 aa11.07□□□□□ -0.64
LINC02538-201ENST00000609107 F6UB75 175 aa11.07□□□□□ -0.64
LINC02538-201ENST00000609107 I3L3M4 83 aa11.07□□□□□ -0.64
LINC02538-201ENST00000609107 GATA1P15976 413 aaPredicted RBP11.07□□□□□ -0.64
LINC02538-201ENST00000609107 C10orf105Q8TEF2 133 aa11.07□□□□□ -0.64
LINC02538-201ENST00000609107 KIAA1549Q9HCM3 1950 aa11.07□□□□□ -0.64
LINC02538-201ENST00000609107 IGHV4-38-2P0DP08 117 aa11.06□□□□□ -0.64
LINC02538-201ENST00000609107 MORN3Q6PF18 240 aaPredicted RBP11.06□□□□□ -0.64
LINC02538-201ENST00000609107 MAPK1IP1LQ8NDC0 245 aa11.06□□□□□ -0.64
LINC02538-201ENST00000609107 SIGMAR1Q99720 223 aa11.06□□□□□ -0.64
LINC02538-201ENST00000609107 TP53TG3Q9ULZ0 132 aa11.06□□□□□ -0.64
LINC02538-201ENST00000609107 ADARB2-AS1A8MUL3 147 aa11.06□□□□□ -0.64
LINC02538-201ENST00000609107 SAP30O75446 220 aa11.06□□□□□ -0.64
LINC02538-201ENST00000609107 CKS1BP61024 79 aa11.06□□□□□ -0.64
LINC02538-201ENST00000609107 PRADC1Q9BSG0 188 aa11.05□□□□□ -0.64
LINC02538-201ENST00000609107 TIMM21Q9BVV7 248 aa11.05□□□□□ -0.64
LINC02538-201ENST00000609107 TRAV12-2A0A075B6T6 113 aa11.05□□□□□ -0.64
LINC02538-201ENST00000609107 K7EP34 96 aa11.05□□□□□ -0.64
LINC02538-201ENST00000609107 GNRH2O43555 120 aa11.05□□□□□ -0.64
LINC02538-201ENST00000609107 DEFB112Q30KQ8 113 aa11.05□□□□□ -0.64
LINC02538-201ENST00000609107 OR13C6PQ8NH95 151 aa11.05□□□□□ -0.64
LINC02538-201ENST00000609107 IGHV4-30-2A0A087WSY4 118 aa11.04□□□□□ -0.64
LINC02538-201ENST00000609107 IGHV4-59P01825 116 aa11.04□□□□□ -0.64
LINC02538-201ENST00000609107 NEGR1Q7Z3B1 354 aa11.04□□□□□ -0.64
LINC02538-201ENST00000609107 SPG11Q96JI7 2443 aa11.04□□□□□ -0.64
LINC02538-201ENST00000609107 BLCAPP62952 87 aa11.04□□□□□ -0.64
LINC02538-201ENST00000609107 CEND1Q8N111 149 aa11.04□□□□□ -0.64
LINC02538-201ENST00000609107 AJUBAQ96IF1 538 aa11.04□□□□□ -0.64
LINC02538-201ENST00000609107 M0R2P5 195 aa11.03□□□□□ -0.64
LINC02538-201ENST00000609107 EBI3Q14213 229 aa11.03□□□□□ -0.64
LINC02538-201ENST00000609107 PCP2Q8IVA1 136 aa11.03□□□□□ -0.64
LINC02538-201ENST00000609107 C1QTNF4Q9BXJ3 329 aa11.03□□□□□ -0.64
LINC02538-201ENST00000609107 K7EP13 123 aa11.03□□□□□ -0.64
LINC02538-201ENST00000609107 RASL10AQ92737 203 aa11.03□□□□□ -0.64
LINC02538-201ENST00000609107 CITED1Q99966 193 aa11.03□□□□□ -0.64
LINC02538-201ENST00000609107 VPREB3Q9UKI3 123 aa11.03□□□□□ -0.64
LINC02538-201ENST00000609107 TRAV8-2A0A0B4J237 113 aa11.03□□□□□ -0.64
LINC02538-201ENST00000609107 A0A1W2PPM0 123 aa11.03□□□□□ -0.64
LINC02538-201ENST00000609107 FOXI2Q6ZQN5 318 aa11.03□□□□□ -0.64
LINC02538-201ENST00000609107 LMO4P61968 165 aa11.02□□□□□ -0.64
LINC02538-201ENST00000609107 ADAMTSL5Q6ZMM2 481 aa11.02□□□□□ -0.64
LINC02538-201ENST00000609107 UBE2E2Q96LR5 201 aa11.02□□□□□ -0.64
LINC02538-201ENST00000609107 SPXQ9BT56 116 aa11.02□□□□□ -0.64
LINC02538-201ENST00000609107 SPATA12Q7Z6I5 190 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms