RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 M0R2P5 195 aa13.3□□□□□ -0.28
CTSA-217ENST00000607482 CRYBA4P53673 196 aa13.3□□□□□ -0.28
CTSA-217ENST00000607482 FLI1Q01543 452 aaPredicted RBP13.3□□□□□ -0.28
CTSA-217ENST00000607482 RASL10AQ92737 203 aa13.3□□□□□ -0.28
CTSA-217ENST00000607482 UPK3BQ9BT76 320 aa13.3□□□□□ -0.28
CTSA-217ENST00000607482 A0A1W2PRE2 83 aa13.29□□□□□ -0.28
CTSA-217ENST00000607482 GCGP01275 180 aa13.29□□□□□ -0.28
CTSA-217ENST00000607482 SFTA3P0C7M3 94 aa13.29□□□□□ -0.28
CTSA-217ENST00000607482 SRIP30626 198 aa13.29□□□□□ -0.28
CTSA-217ENST00000607482 UBE2G2P60604 165 aa13.29□□□□□ -0.28
CTSA-217ENST00000607482 FHL2Q14192 279 aa13.29□□□□□ -0.28
CTSA-217ENST00000607482 SMUG1Q53HV7 270 aa13.29□□□□□ -0.28
CTSA-217ENST00000607482 SAPCD1Q5SSQ6 148 aa13.29□□□□□ -0.28
CTSA-217ENST00000607482 SUN5Q8TC36 379 aa13.29□□□□□ -0.28
CTSA-217ENST00000607482 TVP23CQ96ET8 276 aa13.29□□□□□ -0.28
CTSA-217ENST00000607482 DNAH2Q9P225 4427 aa13.29□□□□□ -0.28
CTSA-217ENST00000607482 IGHV3-16A0A0C4DH30 117 aa13.28□□□□□ -0.28
CTSA-217ENST00000607482 GGTLC3B5MD39 225 aa13.28□□□□□ -0.28
CTSA-217ENST00000607482 TYMSP04818 313 aa13.28□□□□□ -0.28
CTSA-217ENST00000607482 STOML3Q8TAV4 291 aa13.28□□□□□ -0.28
CTSA-217ENST00000607482 ZNF479Q96JC4 524 aa13.28□□□□□ -0.28
CTSA-217ENST00000607482 NKX6-2Q9C056 277 aaPredicted RBP13.28□□□□□ -0.28
CTSA-217ENST00000607482 C9JCJ5 164 aa13.27□□□□□ -0.29
CTSA-217ENST00000607482 FGF8P55075 233 aaPredicted RBP13.27□□□□□ -0.29
CTSA-217ENST00000607482 NEGR1Q7Z3B1 354 aa13.27□□□□□ -0.29
CTSA-217ENST00000607482 TMEM75Q8N9X5 138 aa13.27□□□□□ -0.29
CTSA-217ENST00000607482 TRAV4A0A0B4J268 109 aa13.26□□□□□ -0.29
CTSA-217ENST00000607482 A0A1W2PPQ1 181 aa13.26□□□□□ -0.29
CTSA-217ENST00000607482 SMLR1H3BR10 107 aa13.26□□□□□ -0.29
CTSA-217ENST00000607482 SIVA1O15304 175 aa13.26□□□□□ -0.29
CTSA-217ENST00000607482 ORM1P02763 201 aa13.26□□□□□ -0.29
CTSA-217ENST00000607482 PFN1P07737 140 aaKnown RBP13.26□□□□□ -0.29
CTSA-217ENST00000607482 MUC4Q99102 2169 aa13.26□□□□□ -0.29
CTSA-217ENST00000607482 MAP1LC3B2A6NCE7 125 aa13.25□□□□□ -0.29
CTSA-217ENST00000607482 NXPH4O95158 308 aa13.25□□□□□ -0.29
CTSA-217ENST00000607482 GYPEP15421 78 aa13.25□□□□□ -0.29
CTSA-217ENST00000607482 TNP2Q05952 138 aa13.25□□□□□ -0.29
CTSA-217ENST00000607482 ZNF876PQ49A33 203 aa13.25□□□□□ -0.29
CTSA-217ENST00000607482 TXNDC17Q9BRA2 123 aa13.25□□□□□ -0.29
CTSA-217ENST00000607482 MAP1LC3BQ9GZQ8 125 aa13.25□□□□□ -0.29
CTSA-217ENST00000607482 TRAV34A0A0B4J273 112 aa13.24□□□□□ -0.29
CTSA-217ENST00000607482 S100A4P26447 101 aaKnown RBP13.24□□□□□ -0.29
CTSA-217ENST00000607482 ZNF726P1Q15940 193 aa13.24□□□□□ -0.29
CTSA-217ENST00000607482 NHLRC2Q8NBF2 726 aa13.24□□□□□ -0.29
CTSA-217ENST00000607482 FAT2Q9NYQ8 4349 aa13.23□□□□□ -0.29
CTSA-217ENST00000607482 TRAV9-2A0A087WT02 112 aa13.23□□□□□ -0.29
CTSA-217ENST00000607482 K7EQD1 137 aa13.23□□□□□ -0.29
CTSA-217ENST00000607482 PEX7O00628 323 aa13.23□□□□□ -0.29
CTSA-217ENST00000607482 MED14OSP0DP75 135 aa13.23□□□□□ -0.29
CTSA-217ENST00000607482 ZNF80P51504 273 aaPredicted RBP13.23□□□□□ -0.29
CTSA-217ENST00000607482 CST9LP1Q5W188 147 aa13.23□□□□□ -0.29
CTSA-217ENST00000607482 LYPD5Q6UWN5 251 aa13.23□□□□□ -0.29
CTSA-217ENST00000607482 HIST1H2BAQ96A08 127 aa13.23□□□□□ -0.29
CTSA-217ENST00000607482 KANTRA0A1W2PQU2 76 aa13.22□□□□□ -0.29
CTSA-217ENST00000607482 IGLV2-11P01706 119 aa13.22□□□□□ -0.29
CTSA-217ENST00000607482 UBE2G1P62253 170 aa13.22□□□□□ -0.29
CTSA-217ENST00000607482 LINC00479Q96M42 142 aa13.22□□□□□ -0.29
CTSA-217ENST00000607482 ARL2-SNX15V9GYD0 113 aa13.22□□□□□ -0.29
CTSA-217ENST00000607482 FAM74A7A6NL05 159 aa13.21□□□□□ -0.29
CTSA-217ENST00000607482 C16orf90A8MZG2 172 aa13.21□□□□□ -0.29
CTSA-217ENST00000607482 G3V3Q6 166 aa13.21□□□□□ -0.29
CTSA-217ENST00000607482 SH2D6Q7Z4S9 175 aa13.21□□□□□ -0.29
CTSA-217ENST00000607482 CYTL1Q9NRR1 136 aa13.21□□□□□ -0.29
CTSA-217ENST00000607482 A0A0D9SG52 128 aa13.2□□□□□ -0.3
CTSA-217ENST00000607482 FABP5P3A8MUU1 101 aa13.2□□□□□ -0.3
CTSA-217ENST00000607482 PFDN1O60925 122 aa13.2□□□□□ -0.3
CTSA-217ENST00000607482 BTF3P20290 206 aaKnown RBP13.2□□□□□ -0.3
CTSA-217ENST00000607482 ZNF345Q14585 488 aa13.2□□□□□ -0.3
CTSA-217ENST00000607482 KCNRGQ8N5I3 272 aa13.2□□□□□ -0.3
CTSA-217ENST00000607482 PRADC1Q9BSG0 188 aa13.2□□□□□ -0.3
CTSA-217ENST00000607482 ZNF471Q9BX82 626 aaPredicted RBP13.2□□□□□ -0.3
CTSA-217ENST00000607482 DNAH17Q9UFH2 4485 aa13.2□□□□□ -0.3
CTSA-217ENST00000607482 EIF5AP63241 154 aaKnown RBP13.19□□□□□ -0.3
CTSA-217ENST00000607482 FAM213BQ8TBF2 198 aa13.19□□□□□ -0.3
CTSA-217ENST00000607482 SFT2D1Q8WV19 159 aa13.19□□□□□ -0.3
CTSA-217ENST00000607482 KRTAP1-5Q9BYS1 174 aa13.19□□□□□ -0.3
CTSA-217ENST00000607482 LY96Q9Y6Y9 160 aa13.19□□□□□ -0.3
CTSA-217ENST00000607482 IGHV3-73A0A0B4J1V6 119 aa13.18□□□□□ -0.3
CTSA-217ENST00000607482 UMAD1C9J7I0 102 aa13.18□□□□□ -0.3
CTSA-217ENST00000607482 CIDEAO60543 219 aa13.18□□□□□ -0.3
CTSA-217ENST00000607482 EVI2AP22794 236 aa13.18□□□□□ -0.3
CTSA-217ENST00000607482 ASIPP42127 132 aa13.18□□□□□ -0.3
CTSA-217ENST00000607482 ZNF575Q86XF7 245 aa13.18□□□□□ -0.3
CTSA-217ENST00000607482 FMC1Q96HJ9 113 aa13.18□□□□□ -0.3
CTSA-217ENST00000607482 C11orf21Q9P2W6 132 aa13.18□□□□□ -0.3
CTSA-217ENST00000607482 A0A1B0GV50 99 aa13.17□□□□□ -0.3
CTSA-217ENST00000607482 HMSDA8MTL9 139 aa13.17□□□□□ -0.3
CTSA-217ENST00000607482 LINC00315P59091 139 aa13.17□□□□□ -0.3
CTSA-217ENST00000607482 LGALSLQ3ZCW2 172 aaPredicted RBP13.17□□□□□ -0.3
CTSA-217ENST00000607482 Q86TA4 180 aa13.17□□□□□ -0.3
CTSA-217ENST00000607482 TCEAL7Q9BRU2 100 aa13.17□□□□□ -0.3
CTSA-217ENST00000607482 ZFP30Q9Y2G7 519 aa13.17□□□□□ -0.3
CTSA-217ENST00000607482 B4DEV8 164 aa13.16□□□□□ -0.3
CTSA-217ENST00000607482 EREGO14944 169 aa13.16□□□□□ -0.3
CTSA-217ENST00000607482 BCL2L11O43521 198 aa13.16□□□□□ -0.3
CTSA-217ENST00000607482 SEC11BP0C7V7 166 aa13.16□□□□□ -0.3
CTSA-217ENST00000607482 FHITP49789 147 aa13.16□□□□□ -0.3
CTSA-217ENST00000607482 CFAP126Q5VTH2 177 aa13.16□□□□□ -0.3
CTSA-217ENST00000607482 PKHD1P08F94 4074 aa13.16□□□□□ -0.3
CTSA-217ENST00000607482 GATA1P15976 413 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms