RNA–Protein interactions for RNA: ENST00000606676.1

SHROOM1-207, Transcript of shroom family member 1, humanhuman

Gene SHROOM1, Length 351 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-207ENST00000606676 hCG_2014768A0A024R1R8 64 aa8.93□□□□□ -0.98
SHROOM1-207ENST00000606676 TRAV26-1A0A087WT03 109 aa8.93□□□□□ -0.98
SHROOM1-207ENST00000606676 PEX7O00628 323 aa8.93□□□□□ -0.98
SHROOM1-207ENST00000606676 GCGP01275 180 aa8.93□□□□□ -0.98
SHROOM1-207ENST00000606676 TPT1P13693 172 aaKnown RBP8.93□□□□□ -0.98
SHROOM1-207ENST00000606676 RNF212Q495C1 297 aa8.93□□□□□ -0.98
SHROOM1-207ENST00000606676 DPPA3Q6W0C5 159 aa8.93□□□□□ -0.98
SHROOM1-207ENST00000606676 HIST1H2BAQ96A08 127 aa8.93□□□□□ -0.98
SHROOM1-207ENST00000606676 HECTD4Q9Y4D8 3996 aa8.92□□□□□ -0.98
SHROOM1-207ENST00000606676 TRGV11A0A075B6L2 103 aa8.92□□□□□ -0.98
SHROOM1-207ENST00000606676 IGHV3-16A0A0C4DH30 117 aa8.92□□□□□ -0.98
SHROOM1-207ENST00000606676 NUDT3O95989 172 aa8.92□□□□□ -0.98
SHROOM1-207ENST00000606676 TYMSP04818 313 aa8.92□□□□□ -0.98
SHROOM1-207ENST00000606676 SMUG1Q53HV7 270 aa8.92□□□□□ -0.98
SHROOM1-207ENST00000606676 SAPCD1Q5SSQ6 148 aa8.92□□□□□ -0.98
SHROOM1-207ENST00000606676 VSIG2Q96IQ7 327 aa8.92□□□□□ -0.98
SHROOM1-207ENST00000606676 SPXQ9BT56 116 aa8.92□□□□□ -0.98
SHROOM1-207ENST00000606676 ARL2-SNX15V9GYD0 113 aa8.92□□□□□ -0.98
SHROOM1-207ENST00000606676 A0A0J9YY99 117 aa8.91□□□□□ -0.98
SHROOM1-207ENST00000606676 A0A1B0GV50 99 aa8.91□□□□□ -0.98
SHROOM1-207ENST00000606676 H3BNG1 76 aa8.91□□□□□ -0.98
SHROOM1-207ENST00000606676 PAGE4O60829 102 aa8.91□□□□□ -0.98
SHROOM1-207ENST00000606676 PFN1P07737 140 aaKnown RBP8.91□□□□□ -0.98
SHROOM1-207ENST00000606676 H2AFB1P0C5Y9 115 aa8.91□□□□□ -0.98
SHROOM1-207ENST00000606676 CST9LP1Q5W188 147 aa8.91□□□□□ -0.98
SHROOM1-207ENST00000606676 Q86TA4 180 aa8.91□□□□□ -0.98
SHROOM1-207ENST00000606676 AKAP14Q86UN6 197 aa8.91□□□□□ -0.98
SHROOM1-207ENST00000606676 RASL10AQ92737 203 aa8.91□□□□□ -0.98
SHROOM1-207ENST00000606676 KCNS1Q96KK3 526 aa8.91□□□□□ -0.98
SHROOM1-207ENST00000606676 BIRC6Q9NR09 4857 aa8.9□□□□□ -0.98
SHROOM1-207ENST00000606676 IGHV3-53P01767 116 aa8.9□□□□□ -0.98
SHROOM1-207ENST00000606676 PPT1P50897 306 aa8.9□□□□□ -0.98
SHROOM1-207ENST00000606676 COX8CQ7Z4L0 72 aa8.9□□□□□ -0.98
SHROOM1-207ENST00000606676 UBE2DNLQ8IWF7 75 aa8.9□□□□□ -0.98
SHROOM1-207ENST00000606676 TCEAL7Q9BRU2 100 aa8.9□□□□□ -0.98
SHROOM1-207ENST00000606676 SDF2L1Q9HCN8 221 aa8.9□□□□□ -0.98
SHROOM1-207ENST00000606676 A0A1B0GVG6 124 aa8.89□□□□□ -0.99
SHROOM1-207ENST00000606676 CRIP1P50238 77 aa8.89□□□□□ -0.99
SHROOM1-207ENST00000606676 CCL20P78556 96 aa8.89□□□□□ -0.99
SHROOM1-207ENST00000606676 FHL2Q14192 279 aa8.89□□□□□ -0.99
SHROOM1-207ENST00000606676 ZFP69Q49AA0 526 aa8.89□□□□□ -0.99
SHROOM1-207ENST00000606676 C9orf62Q8N4C0 152 aa8.89□□□□□ -0.99
SHROOM1-207ENST00000606676 FMC1Q96HJ9 113 aa8.89□□□□□ -0.99
SHROOM1-207ENST00000606676 LINC00588Q9Y4M8 146 aa8.89□□□□□ -0.99
SHROOM1-207ENST00000606676 MUC4Q99102 2169 aa8.88□□□□□ -0.99
SHROOM1-207ENST00000606676 TRAV1-1A0A0B4J248 108 aa8.88□□□□□ -0.99
SHROOM1-207ENST00000606676 TRBV6-1A0A0K0K1D8 114 aa8.88□□□□□ -0.99
SHROOM1-207ENST00000606676 M0R2N4 97 aa8.88□□□□□ -0.99
SHROOM1-207ENST00000606676 M0R2P5 195 aa8.88□□□□□ -0.99
SHROOM1-207ENST00000606676 SULT1A2P50226 295 aa8.88□□□□□ -0.99
SHROOM1-207ENST00000606676 RAB5CP51148 216 aa8.88□□□□□ -0.99
SHROOM1-207ENST00000606676 FAM3BP58499 235 aaPredicted RBP8.88□□□□□ -0.99
SHROOM1-207ENST00000606676 EIF5AL1Q6IS14 154 aaKnown RBP8.88□□□□□ -0.99
SHROOM1-207ENST00000606676 Q6ZR54 194 aa8.88□□□□□ -0.99
SHROOM1-207ENST00000606676 SLC51BQ86UW2 128 aa8.88□□□□□ -0.99
SHROOM1-207ENST00000606676 ZC2HC1AQ96GY0 325 aa8.88□□□□□ -0.99
SHROOM1-207ENST00000606676 ZNF479Q96JC4 524 aa8.88□□□□□ -0.99
SHROOM1-207ENST00000606676 ZFP30Q9Y2G7 519 aa8.88□□□□□ -0.99
SHROOM1-207ENST00000606676 PKD1P98161 4303 aa8.87□□□□□ -0.99
SHROOM1-207ENST00000606676 IGLV2-18A0A075B6J9 118 aa8.87□□□□□ -0.99
SHROOM1-207ENST00000606676 A0A096LPF7 62 aa8.87□□□□□ -0.99
SHROOM1-207ENST00000606676 IGKV3D-20A0A0C4DH25 116 aa8.87□□□□□ -0.99
SHROOM1-207ENST00000606676 FABP5P3A8MUU1 101 aa8.87□□□□□ -0.99
SHROOM1-207ENST00000606676 LTAP01374 205 aa8.87□□□□□ -0.99
SHROOM1-207ENST00000606676 SFTA3P0C7M3 94 aa8.87□□□□□ -0.99
SHROOM1-207ENST00000606676 UBE2G1P62253 170 aa8.87□□□□□ -0.99
SHROOM1-207ENST00000606676 ZNF575Q86XF7 245 aa8.87□□□□□ -0.99
SHROOM1-207ENST00000606676 ZNRF2Q8NHG8 242 aa8.87□□□□□ -0.99
SHROOM1-207ENST00000606676 C9orf85Q96MD7 179 aa8.87□□□□□ -0.99
SHROOM1-207ENST00000606676 NACAE9PAV3 2078 aa8.86□□□□□ -0.99
SHROOM1-207ENST00000606676 SCO2A0A1W2PP80 73 aa8.86□□□□□ -0.99
SHROOM1-207ENST00000606676 PAX4O43316 350 aa8.86□□□□□ -0.99
SHROOM1-207ENST00000606676 RNASE3P12724 160 aaKnown RBP8.86□□□□□ -0.99
SHROOM1-207ENST00000606676 CRYBA4P53673 196 aa8.86□□□□□ -0.99
SHROOM1-207ENST00000606676 CCL18P55774 89 aa8.86□□□□□ -0.99
SHROOM1-207ENST00000606676 ESRGQ1W209 222 aa8.86□□□□□ -0.99
SHROOM1-207ENST00000606676 PRO0255Q9UI72 69 aa8.86□□□□□ -0.99
SHROOM1-207ENST00000606676 HHLA3Q9XRX5 114 aa8.86□□□□□ -0.99
SHROOM1-207ENST00000606676 TRAV4A0A0B4J268 109 aa8.85□□□□□ -0.99
SHROOM1-207ENST00000606676 AKR1C3P42330 323 aa8.85□□□□□ -0.99
SHROOM1-207ENST00000606676 SLAQ13239 276 aa8.85□□□□□ -0.99
SHROOM1-207ENST00000606676 ZNF674Q2M3X9 581 aa8.85□□□□□ -0.99
SHROOM1-207ENST00000606676 PKHD1P08F94 4074 aa8.84□□□□□ -0.99
SHROOM1-207ENST00000606676 TRGV4A0A0C4DH28 118 aa8.84□□□□□ -0.99
SHROOM1-207ENST00000606676 KRBOX1C9JBD0 128 aa8.84□□□□□ -0.99
SHROOM1-207ENST00000606676 C9JCJ5 164 aa8.84□□□□□ -0.99
SHROOM1-207ENST00000606676 SH2D1AO60880 128 aa8.84□□□□□ -0.99
SHROOM1-207ENST00000606676 ZNF876PQ49A33 203 aa8.84□□□□□ -0.99
SHROOM1-207ENST00000606676 FAM162BQ5T6X4 162 aa8.84□□□□□ -0.99
SHROOM1-207ENST00000606676 OR4C5Q8NGB2 326 aa8.84□□□□□ -0.99
SHROOM1-207ENST00000606676 PTH2Q96A98 100 aa8.84□□□□□ -0.99
SHROOM1-207ENST00000606676 MANBALQ9NQG1 85 aa8.84□□□□□ -0.99
SHROOM1-207ENST00000606676 GNG13Q9P2W3 67 aa8.84□□□□□ -0.99
SHROOM1-207ENST00000606676 DNAH11Q96DT5 4516 aa8.83□□□□□ -1
SHROOM1-207ENST00000606676 PGPEP1LA6NFU8 196 aa8.83□□□□□ -1
SHROOM1-207ENST00000606676 RTL8CO15255 209 aa8.83□□□□□ -1
SHROOM1-207ENST00000606676 ORM1P02763 201 aa8.83□□□□□ -1
SHROOM1-207ENST00000606676 S100A9P06702 114 aaKnown RBP8.83□□□□□ -1
SHROOM1-207ENST00000606676 NHLRC2Q8NBF2 726 aa8.83□□□□□ -1
SHROOM1-207ENST00000606676 MLST8Q9BVC4 326 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms