RNA–Protein interactions for RNA: ENST00000605216.5

ZSWIM8-223, Transcript of zinc finger SWIM-type containing 8, human

APPRIS P2 TSL 1 (best) BASIC

Gene ZSWIM8, Length 6,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZSWIM8-223	ENST00000605216	AGPAT4-IT1	Q9H0P7	198 aa		13.44	□□□□□ -0.26
ZSWIM8-223	ENST00000605216	VPREB3	Q9UKI3	123 aa		13.44	□□□□□ -0.26
ZSWIM8-223	ENST00000605216	TMEM61	Q8N0U2	210 aa		13.44	□□□□□ -0.26
ZSWIM8-223	ENST00000605216	TM2D2	Q9BX73	214 aa		13.44	□□□□□ -0.26
ZSWIM8-223	ENST00000605216	LINC01620	Q4KN68	170 aa		13.43	□□□□□ -0.26
ZSWIM8-223	ENST00000605216	IGLV3-9	A0A075B6K5	115 aa		13.43	□□□□□ -0.26
ZSWIM8-223	ENST00000605216		K7ERS5	55 aa		13.43	□□□□□ -0.26
ZSWIM8-223	ENST00000605216	SEM1	Q6ZVN7	128 aa		13.43	□□□□□ -0.26
ZSWIM8-223	ENST00000605216	DOPEY2	Q9Y3R5	2298 aa		13.43	□□□□□ -0.26
ZSWIM8-223	ENST00000605216	IGKV4-1	P06312	121 aa		13.43	□□□□□ -0.26
ZSWIM8-223	ENST00000605216	CASC2	Q6XLA1	102 aa		13.43	□□□□□ -0.26
ZSWIM8-223	ENST00000605216	NPB	Q8NG41	125 aa		13.43	□□□□□ -0.26
ZSWIM8-223	ENST00000605216	BRK1	Q8WUW1	75 aa		13.43	□□□□□ -0.26
ZSWIM8-223	ENST00000605216		Q6ZR03	302 aa		13.42	□□□□□ -0.26
ZSWIM8-223	ENST00000605216	GP9	P14770	177 aa		13.42	□□□□□ -0.26
ZSWIM8-223	ENST00000605216	APRG1	Q8IVJ8	170 aa		13.42	□□□□□ -0.26
ZSWIM8-223	ENST00000605216	DEFB125	Q8N687	156 aa		13.42	□□□□□ -0.26
ZSWIM8-223	ENST00000605216	CACNA1D	Q01668	2161 aa		13.42	□□□□□ -0.26
ZSWIM8-223	ENST00000605216	KLF2	Q9Y5W3	355 aa	Predicted RBP	13.42	□□□□□ -0.26
ZSWIM8-223	ENST00000605216	C17orf77	Q96MU5	243 aa		13.41	□□□□□ -0.26
ZSWIM8-223	ENST00000605216	ARFGEF3	Q5TH69	2177 aa		13.41	□□□□□ -0.26
ZSWIM8-223	ENST00000605216	SPTSSB	Q8NFR3	76 aa		13.41	□□□□□ -0.26
ZSWIM8-223	ENST00000605216	DIRC1	Q969H9	104 aa		13.41	□□□□□ -0.26
ZSWIM8-223	ENST00000605216	TAX1BP3	O14907	124 aa		13.41	□□□□□ -0.26
ZSWIM8-223	ENST00000605216	TRBV12-3	P01733	135 aa		13.41	□□□□□ -0.26
ZSWIM8-223	ENST00000605216	ARFGEF1	Q9Y6D6	1849 aa		13.41	□□□□□ -0.26
ZSWIM8-223	ENST00000605216		A4D1N5	150 aa		13.4	□□□□□ -0.26
ZSWIM8-223	ENST00000605216	RNF183	Q96D59	192 aa		13.4	□□□□□ -0.26
ZSWIM8-223	ENST00000605216	C15orf65	H3BRN8	121 aa		13.4	□□□□□ -0.26
ZSWIM8-223	ENST00000605216	DEFB112	Q30KQ8	113 aa		13.4	□□□□□ -0.26
ZSWIM8-223	ENST00000605216	ZNF236	Q9UL36	1845 aa		13.4	□□□□□ -0.26
ZSWIM8-223	ENST00000605216	HOXB4	P17483	251 aa	Predicted RBP	13.4	□□□□□ -0.27
ZSWIM8-223	ENST00000605216	CXCL5	P42830	114 aa		13.4	□□□□□ -0.27
ZSWIM8-223	ENST00000605216	SIPA1L3	O60292	1781 aa	Predicted RBP	13.39	□□□□□ -0.27
ZSWIM8-223	ENST00000605216	RPL39L	Q96EH5	51 aa	Known RBP	13.39	□□□□□ -0.27
ZSWIM8-223	ENST00000605216	LRRK1	Q38SD2	2015 aa		13.39	□□□□□ -0.27
ZSWIM8-223	ENST00000605216		K7EN84	100 aa		13.39	□□□□□ -0.27
ZSWIM8-223	ENST00000605216	B9D2	Q9BPU9	175 aa		13.39	□□□□□ -0.27
ZSWIM8-223	ENST00000605216	EP300	Q09472	2414 aa	Predicted RBP	13.39	□□□□□ -0.27
ZSWIM8-223	ENST00000605216	IGHV2-5	P01817	119 aa		13.39	□□□□□ -0.27
ZSWIM8-223	ENST00000605216	DIAPH2-AS1	Q14236	149 aa		13.39	□□□□□ -0.27
ZSWIM8-223	ENST00000605216	FAM186A	A6NE01	2351 aa		13.39	□□□□□ -0.27
ZSWIM8-223	ENST00000605216		A0A0J9YXV3	536 aa		13.38	□□□□□ -0.27
ZSWIM8-223	ENST00000605216	LECT2	O14960	151 aa		13.38	□□□□□ -0.27
ZSWIM8-223	ENST00000605216	FANCM	Q8IYD8	2048 aa		13.38	□□□□□ -0.27
ZSWIM8-223	ENST00000605216	GATA1	P15976	413 aa	Predicted RBP	13.38	□□□□□ -0.27
ZSWIM8-223	ENST00000605216	PRR20E	P86478	221 aa		13.38	□□□□□ -0.27
ZSWIM8-223	ENST00000605216	PRR20C	P86479	221 aa		13.38	□□□□□ -0.27
ZSWIM8-223	ENST00000605216	PRR20D	P86480	221 aa		13.38	□□□□□ -0.27
ZSWIM8-223	ENST00000605216	PRR20B	P86481	221 aa		13.38	□□□□□ -0.27
ZSWIM8-223	ENST00000605216	PRR20A	P86496	221 aa		13.38	□□□□□ -0.27
ZSWIM8-223	ENST00000605216	CACNA1I	Q9P0X4	2223 aa		13.38	□□□□□ -0.27
ZSWIM8-223	ENST00000605216	DEFB136	Q30KP8	78 aa		13.38	□□□□□ -0.27
ZSWIM8-223	ENST00000605216	IGHV4-59	P01825	116 aa		13.37	□□□□□ -0.27
ZSWIM8-223	ENST00000605216	CRYGB	P07316	175 aa		13.37	□□□□□ -0.27
ZSWIM8-223	ENST00000605216	TEN1	Q86WV5	123 aa		13.37	□□□□□ -0.27
ZSWIM8-223	ENST00000605216	FGF23	Q9GZV9	251 aa	Predicted RBP	13.37	□□□□□ -0.27
ZSWIM8-223	ENST00000605216	PATJ	Q8NI35	1801 aa		13.36	□□□□□ -0.27
ZSWIM8-223	ENST00000605216	SLURP1	P55000	103 aa		13.36	□□□□□ -0.27
ZSWIM8-223	ENST00000605216	LGALS9	O00182	355 aa		13.36	□□□□□ -0.27
ZSWIM8-223	ENST00000605216	KLK5	Q9Y337	293 aa	Predicted RBP	13.36	□□□□□ -0.27
ZSWIM8-223	ENST00000605216	DIDO1	Q9BTC0	2240 aa	Known RBP	13.36	□□□□□ -0.27
ZSWIM8-223	ENST00000605216	COL18A1	P39060	1754 aa		13.36	□□□□□ -0.27
ZSWIM8-223	ENST00000605216	TMEM256-PLSCR3	K7ERE1	68 aa		13.36	□□□□□ -0.27
ZSWIM8-223	ENST00000605216	SPRY2	O43597	315 aa		13.36	□□□□□ -0.27
ZSWIM8-223	ENST00000605216	C10orf91	Q5T1B1	145 aa		13.36	□□□□□ -0.27
ZSWIM8-223	ENST00000605216	MRPL55	Q7Z7F7	128 aa	Known RBP	13.35	□□□□□ -0.27
ZSWIM8-223	ENST00000605216	PDE6G	P18545	87 aa		13.35	□□□□□ -0.27
ZSWIM8-223	ENST00000605216	POLR2A	P24928	1970 aa	Known RBP	13.34	□□□□□ -0.27
ZSWIM8-223	ENST00000605216	ATAD5	Q96QE3	1844 aa		13.34	□□□□□ -0.27
ZSWIM8-223	ENST00000605216	FAM110A	Q9BQ89	295 aa		13.34	□□□□□ -0.27
ZSWIM8-223	ENST00000605216	DAND5	Q8N907	189 aa		13.34	□□□□□ -0.27
ZSWIM8-223	ENST00000605216	SPAG11B	Q08648	103 aa		13.34	□□□□□ -0.27
ZSWIM8-223	ENST00000605216	TNS1	Q9HBL0	1735 aa	Known RBP	13.34	□□□□□ -0.27
ZSWIM8-223	ENST00000605216	IGFL3	Q6UXB1	125 aa		13.34	□□□□□ -0.27
ZSWIM8-223	ENST00000605216	ESM1	Q9NQ30	184 aa		13.34	□□□□□ -0.27
ZSWIM8-223	ENST00000605216	MPDZ	O75970	2070 aa		13.33	□□□□□ -0.27
ZSWIM8-223	ENST00000605216	TRBV10-2	A0A0K0K1G8	114 aa		13.33	□□□□□ -0.28
ZSWIM8-223	ENST00000605216	KAAG1	Q9UBP8	84 aa		13.33	□□□□□ -0.28
ZSWIM8-223	ENST00000605216	HHLA3	Q9XRX5	114 aa		13.33	□□□□□ -0.28
ZSWIM8-223	ENST00000605216	DOCK9	Q9BZ29	2069 aa		13.33	□□□□□ -0.28
ZSWIM8-223	ENST00000605216	KIF26B	Q2KJY2	2108 aa		13.33	□□□□□ -0.28
ZSWIM8-223	ENST00000605216	GBF1	Q92538	1859 aa		13.33	□□□□□ -0.28
ZSWIM8-223	ENST00000605216	COX7B	P24311	80 aa		13.32	□□□□□ -0.28
ZSWIM8-223	ENST00000605216	GPHB5	Q86YW7	130 aa		13.31	□□□□□ -0.28
ZSWIM8-223	ENST00000605216	MYOF	Q9NZM1	2061 aa		13.31	□□□□□ -0.28
ZSWIM8-223	ENST00000605216	SPTBN1	Q01082	2364 aa	Known RBP	13.31	□□□□□ -0.28
ZSWIM8-223	ENST00000605216	ABCA4	P78363	2273 aa		13.31	□□□□□ -0.28
ZSWIM8-223	ENST00000605216	MYO7B	Q6PIF6	2116 aa		13.31	□□□□□ -0.28
ZSWIM8-223	ENST00000605216	TRBV7-3	A0A075B6L6	115 aa		13.31	□□□□□ -0.28
ZSWIM8-223	ENST00000605216	IGHV4OR15-8	A0A075B7B6	117 aa		13.31	□□□□□ -0.28
ZSWIM8-223	ENST00000605216		A0A087WW49	117 aa		13.31	□□□□□ -0.28
ZSWIM8-223	ENST00000605216	USP17L23	D6RBM5	183 aa		13.3	□□□□□ -0.28
ZSWIM8-223	ENST00000605216	IGLV1-44	P01699	117 aa		13.3	□□□□□ -0.28
ZSWIM8-223	ENST00000605216	KIR2DL5B	A0A0G2JN68	375 aa		13.3	□□□□□ -0.28
ZSWIM8-223	ENST00000605216	KIR2DL5B	A0A0G2JPC4	375 aa		13.3	□□□□□ -0.28
ZSWIM8-223	ENST00000605216	KIR2DL5A	Q8N109	375 aa		13.3	□□□□□ -0.28
ZSWIM8-223	ENST00000605216	CLEC2B	Q92478	149 aa		13.3	□□□□□ -0.28
ZSWIM8-223	ENST00000605216	CEP250	Q9BV73	2442 aa		13.3	□□□□□ -0.28
ZSWIM8-223	ENST00000605216		H3BT86	120 aa		13.29	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms