RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 LGALS9BQ3B8N2 356 aa10.06□□□□□ -0.8
TUBE1-208ENST00000604743 ZFP69Q49AA0 526 aa10.06□□□□□ -0.8
TUBE1-208ENST00000604743 TMEM75Q8N9X5 138 aa10.06□□□□□ -0.8
TUBE1-208ENST00000604743 SDF2L1Q9HCN8 221 aa10.06□□□□□ -0.8
TUBE1-208ENST00000604743 BIRC6Q9NR09 4857 aa10.06□□□□□ -0.8
TUBE1-208ENST00000604743 A0A1B0GVG6 124 aa10.05□□□□□ -0.8
TUBE1-208ENST00000604743 PEX7O00628 323 aa10.05□□□□□ -0.8
TUBE1-208ENST00000604743 TYMSP04818 313 aa10.05□□□□□ -0.8
TUBE1-208ENST00000604743 CCL18P55774 89 aa10.05□□□□□ -0.8
TUBE1-208ENST00000604743 EIF5AP63241 154 aaKnown RBP10.05□□□□□ -0.8
TUBE1-208ENST00000604743 SMUG1Q53HV7 270 aa10.05□□□□□ -0.8
TUBE1-208ENST00000604743 CST9LP1Q5W188 147 aa10.05□□□□□ -0.8
TUBE1-208ENST00000604743 SFT2D1Q8WV19 159 aa10.05□□□□□ -0.8
TUBE1-208ENST00000604743 UMAD1C9J7I0 102 aa10.04□□□□□ -0.8
TUBE1-208ENST00000604743 C1QBP02746 253 aa10.04□□□□□ -0.8
TUBE1-208ENST00000604743 TPT1P13693 172 aaKnown RBP10.04□□□□□ -0.8
TUBE1-208ENST00000604743 PPT1P50897 306 aa10.04□□□□□ -0.8
TUBE1-208ENST00000604743 TDRG1Q3Y452 100 aa10.04□□□□□ -0.8
TUBE1-208ENST00000604743 KCNS1Q96KK3 526 aa10.04□□□□□ -0.8
TUBE1-208ENST00000604743 C18orf15Q96N68 181 aa10.04□□□□□ -0.8
TUBE1-208ENST00000604743 SPXQ9BT56 116 aa10.04□□□□□ -0.8
TUBE1-208ENST00000604743 NKX6-2Q9C056 277 aaPredicted RBP10.04□□□□□ -0.8
TUBE1-208ENST00000604743 LINC00588Q9Y4M8 146 aa10.04□□□□□ -0.8
TUBE1-208ENST00000604743 DNAH2Q9P225 4427 aa10.04□□□□□ -0.8
TUBE1-208ENST00000604743 IGHV3-16A0A0C4DH30 117 aa10.03□□□□□ -0.8
TUBE1-208ENST00000604743 FBLL1A6NHQ2 334 aaKnown RBP10.03□□□□□ -0.8
TUBE1-208ENST00000604743 PAGE4O60829 102 aa10.03□□□□□ -0.8
TUBE1-208ENST00000604743 SFTA3P0C7M3 94 aa10.03□□□□□ -0.8
TUBE1-208ENST00000604743 SAPCD1Q5SSQ6 148 aa10.03□□□□□ -0.8
TUBE1-208ENST00000604743 VSIG2Q96IQ7 327 aa10.03□□□□□ -0.8
TUBE1-208ENST00000604743 C11orf21Q9P2W6 132 aa10.03□□□□□ -0.8
TUBE1-208ENST00000604743 ARL2-SNX15V9GYD0 113 aa10.03□□□□□ -0.8
TUBE1-208ENST00000604743 TRGV4A0A0C4DH28 118 aa10.02□□□□□ -0.81
TUBE1-208ENST00000604743 PAX4O43316 350 aa10.02□□□□□ -0.81
TUBE1-208ENST00000604743 PFN1P07737 140 aaKnown RBP10.02□□□□□ -0.81
TUBE1-208ENST00000604743 LGALSLQ3ZCW2 172 aaPredicted RBP10.02□□□□□ -0.81
TUBE1-208ENST00000604743 MBD3L1Q8WWY6 194 aa10.02□□□□□ -0.81
TUBE1-208ENST00000604743 HIST1H2BAQ96A08 127 aa10.02□□□□□ -0.81
TUBE1-208ENST00000604743 DNAH17Q9UFH2 4485 aa10.02□□□□□ -0.81
TUBE1-208ENST00000604743 C9JCJ5 164 aa10.01□□□□□ -0.81
TUBE1-208ENST00000604743 H3BNG1 76 aa10.01□□□□□ -0.81
TUBE1-208ENST00000604743 M0R2P5 195 aa10.01□□□□□ -0.81
TUBE1-208ENST00000604743 H2AFB1P0C5Y9 115 aa10.01□□□□□ -0.81
TUBE1-208ENST00000604743 FAM3BP58499 235 aaPredicted RBP10.01□□□□□ -0.81
TUBE1-208ENST00000604743 UBE2G1P62253 170 aa10.01□□□□□ -0.81
TUBE1-208ENST00000604743 FHL2Q14192 279 aa10.01□□□□□ -0.81
TUBE1-208ENST00000604743 Q86TA4 180 aa10.01□□□□□ -0.81
TUBE1-208ENST00000604743 RASL10AQ92737 203 aa10.01□□□□□ -0.81
TUBE1-208ENST00000604743 ZNF479Q96JC4 524 aa10.01□□□□□ -0.81
TUBE1-208ENST00000604743 HHLA3Q9XRX5 114 aa10.01□□□□□ -0.81
TUBE1-208ENST00000604743 A0A096LPF7 62 aa10□□□□□ -0.81
TUBE1-208ENST00000604743 ESRGQ1W209 222 aa10□□□□□ -0.81
TUBE1-208ENST00000604743 DPPA3Q6W0C5 159 aa10□□□□□ -0.81
TUBE1-208ENST00000604743 OR4C5Q8NGB2 326 aa10□□□□□ -0.81
TUBE1-208ENST00000604743 ZNRF2Q8NHG8 242 aa10□□□□□ -0.81
TUBE1-208ENST00000604743 PRO0255Q9UI72 69 aa10□□□□□ -0.81
TUBE1-208ENST00000604743 FABP5P3A8MUU1 101 aa9.99□□□□□ -0.81
TUBE1-208ENST00000604743 AKR1C3P42330 323 aa9.99□□□□□ -0.81
TUBE1-208ENST00000604743 CRYBA4P53673 196 aa9.99□□□□□ -0.81
TUBE1-208ENST00000604743 Q6ZR54 194 aa9.99□□□□□ -0.81
TUBE1-208ENST00000604743 FMC1Q96HJ9 113 aa9.99□□□□□ -0.81
TUBE1-208ENST00000604743 ICOSQ9Y6W8 199 aa9.99□□□□□ -0.81
TUBE1-208ENST00000604743 TRAV4A0A0B4J268 109 aa9.98□□□□□ -0.81
TUBE1-208ENST00000604743 ORM1P02763 201 aa9.98□□□□□ -0.81
TUBE1-208ENST00000604743 SLAQ13239 276 aa9.98□□□□□ -0.81
TUBE1-208ENST00000604743 ZC2HC1AQ96GY0 325 aa9.98□□□□□ -0.81
TUBE1-208ENST00000604743 IGKV3D-20A0A0C4DH25 116 aa9.97□□□□□ -0.81
TUBE1-208ENST00000604743 NBDYA0A0U1RRE5 68 aa9.97□□□□□ -0.81
TUBE1-208ENST00000604743 RTL8CO15255 209 aa9.97□□□□□ -0.81
TUBE1-208ENST00000604743 S100A4P26447 101 aaKnown RBP9.97□□□□□ -0.81
TUBE1-208ENST00000604743 ZNF876PQ49A33 203 aa9.97□□□□□ -0.81
TUBE1-208ENST00000604743 EIF5AL1Q6IS14 154 aaKnown RBP9.97□□□□□ -0.81
TUBE1-208ENST00000604743 LINC00336Q6ZUF6 198 aa9.97□□□□□ -0.81
TUBE1-208ENST00000604743 TCEAL7Q9BRU2 100 aa9.97□□□□□ -0.81
TUBE1-208ENST00000604743 Q9H8V8 135 aa9.97□□□□□ -0.81
TUBE1-208ENST00000604743 ZFP30Q9Y2G7 519 aa9.97□□□□□ -0.81
TUBE1-208ENST00000604743 SCO2A0A1W2PP80 73 aa9.96□□□□□ -0.82
TUBE1-208ENST00000604743 PRSS29PA6NIE9 313 aa9.96□□□□□ -0.82
TUBE1-208ENST00000604743 B4DEV8 164 aa9.96□□□□□ -0.82
TUBE1-208ENST00000604743 M0R036 132 aa9.96□□□□□ -0.82
TUBE1-208ENST00000604743 CRIP1P50238 77 aa9.96□□□□□ -0.82
TUBE1-208ENST00000604743 CCL20P78556 96 aa9.96□□□□□ -0.82
TUBE1-208ENST00000604743 C1orf134Q5TEV5 83 aa9.96□□□□□ -0.82
TUBE1-208ENST00000604743 NHLRC2Q8NBF2 726 aa9.96□□□□□ -0.82
TUBE1-208ENST00000604743 C9orf85Q96MD7 179 aa9.96□□□□□ -0.82
TUBE1-208ENST00000604743 GNG13Q9P2W3 67 aa9.96□□□□□ -0.82
TUBE1-208ENST00000604743 IGHV3-73A0A0B4J1V6 119 aa9.95□□□□□ -0.82
TUBE1-208ENST00000604743 PGPEP1LA6NFU8 196 aa9.95□□□□□ -0.82
TUBE1-208ENST00000604743 SH2D1AO60880 128 aa9.95□□□□□ -0.82
TUBE1-208ENST00000604743 RNASE3P12724 160 aaKnown RBP9.95□□□□□ -0.82
TUBE1-208ENST00000604743 GYPEP15421 78 aa9.95□□□□□ -0.82
TUBE1-208ENST00000604743 ASIPP42127 132 aa9.95□□□□□ -0.82
TUBE1-208ENST00000604743 RAB5CP51148 216 aa9.95□□□□□ -0.82
TUBE1-208ENST00000604743 MRPL23Q16540 153 aaKnown RBP9.95□□□□□ -0.82
TUBE1-208ENST00000604743 SOHLH1Q5JUK2 328 aa9.95□□□□□ -0.82
TUBE1-208ENST00000604743 SLC51BQ86UW2 128 aa9.95□□□□□ -0.82
TUBE1-208ENST00000604743 PCNPQ8WW12 178 aaKnown RBP9.95□□□□□ -0.82
TUBE1-208ENST00000604743 MRPS16Q9Y3D3 137 aaKnown RBP9.95□□□□□ -0.82
TUBE1-208ENST00000604743 FAT2Q9NYQ8 4349 aa9.95□□□□□ -0.82
TUBE1-208ENST00000604743 TMSB15BA0A087X1C1 80 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms