RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 MPC2O95563 127 aa8.89□□□□□ -0.99
RPS28-204ENST00000602140 CRYGDP07320 174 aa8.89□□□□□ -0.99
RPS28-204ENST00000602140 RPL12P30050 165 aaKnown RBP8.89□□□□□ -0.99
RPS28-204ENST00000602140 IFITM3Q01628 133 aa8.89□□□□□ -0.99
RPS28-204ENST00000602140 FAM74A1Q5RGS3 127 aa8.89□□□□□ -0.99
RPS28-204ENST00000602140 TRAV21A0A0B4J279 112 aa8.88□□□□□ -0.99
RPS28-204ENST00000602140 F6UZH7 168 aa8.88□□□□□ -0.99
RPS28-204ENST00000602140 PET100P0DJ07 73 aa8.88□□□□□ -0.99
RPS28-204ENST00000602140 INAFM2P0DMQ5 153 aa8.88□□□□□ -0.99
RPS28-204ENST00000602140 GOLT1AQ6ZVE7 132 aa8.88□□□□□ -0.99
RPS28-204ENST00000602140 TVP23CQ96ET8 276 aa8.88□□□□□ -0.99
RPS28-204ENST00000602140 TRAV8-1A0A0A6YYK1 113 aa8.87□□□□□ -0.99
RPS28-204ENST00000602140 SSNA1O43805 119 aa8.87□□□□□ -0.99
RPS28-204ENST00000602140 TYMSP04818 313 aa8.87□□□□□ -0.99
RPS28-204ENST00000602140 Q5VSD8 79 aa8.87□□□□□ -0.99
RPS28-204ENST00000602140 C10orf126Q8N4M7 172 aa8.87□□□□□ -0.99
RPS28-204ENST00000602140 NHLRC2Q8NBF2 726 aa8.87□□□□□ -0.99
RPS28-204ENST00000602140 MARVELD1Q9BSK0 173 aa8.87□□□□□ -0.99
RPS28-204ENST00000602140 WFDC1Q9HC57 220 aa8.87□□□□□ -0.99
RPS28-204ENST00000602140 TREM1Q9NP99 234 aa8.87□□□□□ -0.99
RPS28-204ENST00000602140 A0A1W2PPV4 95 aa8.86□□□□□ -0.99
RPS28-204ENST00000602140 HMGB3O15347 200 aaKnown RBP8.86□□□□□ -0.99
RPS28-204ENST00000602140 GATA1P15976 413 aaPredicted RBP8.86□□□□□ -0.99
RPS28-204ENST00000602140 GCSHP23434 173 aa8.86□□□□□ -0.99
RPS28-204ENST00000602140 GNG5P63218 68 aa8.86□□□□□ -0.99
RPS28-204ENST00000602140 ACOT6Q3I5F7 207 aaPredicted RBP8.86□□□□□ -0.99
RPS28-204ENST00000602140 PQLC2Q6ZP29 291 aa8.86□□□□□ -0.99
RPS28-204ENST00000602140 SH2D6Q7Z4S9 175 aa8.86□□□□□ -0.99
RPS28-204ENST00000602140 ARL6IP6Q8N6S5 226 aa8.86□□□□□ -0.99
RPS28-204ENST00000602140 FRZBQ92765 325 aa8.86□□□□□ -0.99
RPS28-204ENST00000602140 SDF2L1Q9HCN8 221 aa8.86□□□□□ -0.99
RPS28-204ENST00000602140 HERC1Q15751 4861 aa8.85□□□□□ -0.99
RPS28-204ENST00000602140 IGHV3-38A0A0C4DH36 116 aa8.85□□□□□ -0.99
RPS28-204ENST00000602140 SMR3BP02814 79 aaPredicted RBP8.85□□□□□ -0.99
RPS28-204ENST00000602140 PPT1P50897 306 aa8.85□□□□□ -0.99
RPS28-204ENST00000602140 RAB2AP61019 212 aa8.85□□□□□ -0.99
RPS28-204ENST00000602140 ASB13Q8WXK3 278 aa8.85□□□□□ -0.99
RPS28-204ENST00000602140 KCNS1Q96KK3 526 aa8.85□□□□□ -0.99
RPS28-204ENST00000602140 SGK494Q96LW2 274 aa8.85□□□□□ -0.99
RPS28-204ENST00000602140 FBLL1A6NHQ2 334 aaKnown RBP8.84□□□□□ -0.99
RPS28-204ENST00000602140 PSCAO43653 123 aa8.84□□□□□ -0.99
RPS28-204ENST00000602140 TIRAPP58753 221 aa8.84□□□□□ -0.99
RPS28-204ENST00000602140 OR10G9Q8NGN4 311 aa8.84□□□□□ -0.99
RPS28-204ENST00000602140 OR10G7Q8NGN6 311 aa8.84□□□□□ -0.99
RPS28-204ENST00000602140 PFN1P07737 140 aaKnown RBP8.83□□□□□ -1
RPS28-204ENST00000602140 ZNF876PQ49A33 203 aa8.83□□□□□ -1
RPS28-204ENST00000602140 LINC01556Q5JQF7 62 aa8.83□□□□□ -1
RPS28-204ENST00000602140 SLC25A29Q8N8R3 303 aa8.83□□□□□ -1
RPS28-204ENST00000602140 PRADC1Q9BSG0 188 aa8.83□□□□□ -1
RPS28-204ENST00000602140 NDFIP1Q9BT67 221 aa8.83□□□□□ -1
RPS28-204ENST00000602140 IGLV5-52A0A0A0MRZ9 124 aa8.82□□□□□ -1
RPS28-204ENST00000602140 IGHV3-73A0A0B4J1V6 119 aa8.82□□□□□ -1
RPS28-204ENST00000602140 TRAV8-6A0A0B4J262 113 aa8.82□□□□□ -1
RPS28-204ENST00000602140 LRCOL1A6NCL2 159 aa8.82□□□□□ -1
RPS28-204ENST00000602140 IBA57-AS1B1ANH7 110 aa8.82□□□□□ -1
RPS28-204ENST00000602140 ARL14EPLP0DKL9 152 aa8.82□□□□□ -1
RPS28-204ENST00000602140 ZNF80P51504 273 aaPredicted RBP8.82□□□□□ -1
RPS28-204ENST00000602140 HAMPP81172 84 aa8.82□□□□□ -1
RPS28-204ENST00000602140 OR10J3Q5JRS4 329 aa8.82□□□□□ -1
RPS28-204ENST00000602140 CFAP126Q5VTH2 177 aa8.82□□□□□ -1
RPS28-204ENST00000602140 DPPA3Q6W0C5 159 aa8.82□□□□□ -1
RPS28-204ENST00000602140 Q9HAA7 133 aa8.82□□□□□ -1
RPS28-204ENST00000602140 C11orf21Q9P2W6 132 aa8.82□□□□□ -1
RPS28-204ENST00000602140 SERTM2A0A1B0GWG4 89 aa8.81□□□□□ -1
RPS28-204ENST00000602140 TRBV6-4A0A1B0GX49 114 aa8.81□□□□□ -1
RPS28-204ENST00000602140 RS1O15537 224 aa8.81□□□□□ -1
RPS28-204ENST00000602140 CDC34P49427 236 aaPredicted RBP8.81□□□□□ -1
RPS28-204ENST00000602140 DEFA1P59665 94 aa8.81□□□□□ -1
RPS28-204ENST00000602140 DEFA3P59666 94 aa8.81□□□□□ -1
RPS28-204ENST00000602140 RHOHQ15669 191 aa8.81□□□□□ -1
RPS28-204ENST00000602140 C5orf17Q8NAS9 161 aa8.81□□□□□ -1
RPS28-204ENST00000602140 SRRM2Q9UQ35 2752 aaKnown RBP8.81□□□□□ -1
RPS28-204ENST00000602140 K7EQM0 130 aa8.8□□□□□ -1
RPS28-204ENST00000602140 TAAR5O14804 337 aa8.8□□□□□ -1
RPS28-204ENST00000602140 CIDEAO60543 219 aa8.8□□□□□ -1
RPS28-204ENST00000602140 GCGP01275 180 aa8.8□□□□□ -1
RPS28-204ENST00000602140 IGHV3-30P01768 117 aa8.8□□□□□ -1
RPS28-204ENST00000602140 IGHV3-33P01772 117 aa8.8□□□□□ -1
RPS28-204ENST00000602140 TCRAP04437 139 aa8.8□□□□□ -1
RPS28-204ENST00000602140 STAG3L2P0CL84 134 aa8.8□□□□□ -1
RPS28-204ENST00000602140 STAG3L3P0CL85 134 aa8.8□□□□□ -1
RPS28-204ENST00000602140 IGHV3-30-3P0DP02 117 aa8.8□□□□□ -1
RPS28-204ENST00000602140 IGHV3-30-5P0DP03 117 aa8.8□□□□□ -1
RPS28-204ENST00000602140 TMEM75Q8N9X5 138 aa8.8□□□□□ -1
RPS28-204ENST00000602140 NTN5Q8WTR8 489 aaPredicted RBP8.8□□□□□ -1
RPS28-204ENST00000602140 C9orf85Q96MD7 179 aa8.8□□□□□ -1
RPS28-204ENST00000602140 PSG8Q9UQ74 426 aa8.8□□□□□ -1
RPS28-204ENST00000602140 DMBT1Q9UGM3 2413 aaPredicted RBP8.8□□□□□ -1
RPS28-204ENST00000602140 PGPEP1LA6NFU8 196 aa8.79□□□□□ -1
RPS28-204ENST00000602140 FAM229AH3BQW9 127 aa8.79□□□□□ -1
RPS28-204ENST00000602140 GCHFRP30047 84 aa8.79□□□□□ -1
RPS28-204ENST00000602140 ZNF506Q5JVG8 444 aa8.79□□□□□ -1
RPS28-204ENST00000602140 LELP1Q5T871 98 aa8.79□□□□□ -1
RPS28-204ENST00000602140 Q8N814 137 aa8.79□□□□□ -1
RPS28-204ENST00000602140 HSD17B11Q8NBQ5 300 aa8.79□□□□□ -1
RPS28-204ENST00000602140 RAB24Q969Q5 203 aa8.79□□□□□ -1
RPS28-204ENST00000602140 TMEM70Q9BUB7 260 aa8.79□□□□□ -1
RPS28-204ENST00000602140 MYCBP2O75592 4640 aa8.78□□□□□ -1
RPS28-204ENST00000602140 A6NHS1 94 aa8.78□□□□□ -1
RPS28-204ENST00000602140 IGLV2-11P01706 119 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms