RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 DUSP14O95147 198 aaKnown RBP6.85□□□□□ -1.31
HIF3A-219ENST00000600879 IGKV2D-40P01614 121 aaPredicted RBP6.85□□□□□ -1.31
HIF3A-219ENST00000600879 BCL2P10415 239 aa6.85□□□□□ -1.31
HIF3A-219ENST00000600879 TAGLN2P37802 199 aaKnown RBP6.85□□□□□ -1.31
HIF3A-219ENST00000600879 CLLU1Q5K131 121 aa6.85□□□□□ -1.31
HIF3A-219ENST00000600879 Q6ZRN7 208 aaPredicted RBP6.85□□□□□ -1.31
HIF3A-219ENST00000600879 GOLT1AQ6ZVE7 132 aa6.85□□□□□ -1.31
HIF3A-219ENST00000600879 NOP10Q9NPE3 64 aaKnown RBP6.85□□□□□ -1.31
HIF3A-219ENST00000600879 TNFRSF18Q9Y5U5 241 aa6.85□□□□□ -1.31
HIF3A-219ENST00000600879 A0A1W2PPQ1 181 aa6.84□□□□□ -1.31
HIF3A-219ENST00000600879 RBFOX3A6NFN3 312 aa6.84□□□□□ -1.31
HIF3A-219ENST00000600879 A8MTW9 85 aa6.84□□□□□ -1.31
HIF3A-219ENST00000600879 F6UZH7 168 aa6.84□□□□□ -1.31
HIF3A-219ENST00000600879 RGS13O14921 159 aa6.84□□□□□ -1.31
HIF3A-219ENST00000600879 EREGO14944 169 aa6.84□□□□□ -1.31
HIF3A-219ENST00000600879 TCRAP04437 139 aa6.84□□□□□ -1.31
HIF3A-219ENST00000600879 TSPOP30536 169 aa6.84□□□□□ -1.31
HIF3A-219ENST00000600879 ERVFC1-1P60608 527 aa6.84□□□□□ -1.31
HIF3A-219ENST00000600879 ERCC8Q13216 396 aa6.84□□□□□ -1.31
HIF3A-219ENST00000600879 TOR2AQ5JU69 321 aa6.84□□□□□ -1.31
HIF3A-219ENST00000600879 CCDC28AQ8IWP9 274 aa6.84□□□□□ -1.31
HIF3A-219ENST00000600879 ARL6IP6Q8N6S5 226 aa6.84□□□□□ -1.31
HIF3A-219ENST00000600879 TXNDC17Q9BRA2 123 aa6.84□□□□□ -1.31
HIF3A-219ENST00000600879 UPK3BQ9BT76 320 aa6.84□□□□□ -1.31
HIF3A-219ENST00000600879 EIF5A2Q9GZV4 153 aaKnown RBP6.84□□□□□ -1.31
HIF3A-219ENST00000600879 PPP1R14DQ9NXH3 145 aa6.84□□□□□ -1.31
HIF3A-219ENST00000600879 VAX2Q9UIW0 290 aa6.84□□□□□ -1.31
HIF3A-219ENST00000600879 EPDR1Q9UM22 224 aa6.84□□□□□ -1.31
HIF3A-219ENST00000600879 MRPS16Q9Y3D3 137 aaKnown RBP6.84□□□□□ -1.31
HIF3A-219ENST00000600879 SERTM2A0A1B0GWG4 89 aa6.83□□□□□ -1.32
HIF3A-219ENST00000600879 SCO2A0A1W2PP80 73 aa6.83□□□□□ -1.32
HIF3A-219ENST00000600879 RBAKDNA6NC62 111 aa6.83□□□□□ -1.32
HIF3A-219ENST00000600879 NPIPB6E9PJ23 425 aa6.83□□□□□ -1.32
HIF3A-219ENST00000600879 FAM229AH3BQW9 127 aa6.83□□□□□ -1.32
HIF3A-219ENST00000600879 K7EQM0 130 aa6.83□□□□□ -1.32
HIF3A-219ENST00000600879 PEX7O00628 323 aa6.83□□□□□ -1.32
HIF3A-219ENST00000600879 HOXA5P20719 270 aa6.83□□□□□ -1.32
HIF3A-219ENST00000600879 MEF2BQ02080 365 aaPredicted RBP6.83□□□□□ -1.32
HIF3A-219ENST00000600879 ZNF506Q5JVG8 444 aa6.83□□□□□ -1.32
HIF3A-219ENST00000600879 TMEM78Q5T7P6 136 aa6.83□□□□□ -1.32
HIF3A-219ENST00000600879 Q6ZSN1 163 aa6.83□□□□□ -1.32
HIF3A-219ENST00000600879 CYB561D1Q8N8Q1 229 aa6.83□□□□□ -1.32
HIF3A-219ENST00000600879 HIST1H2BAQ96A08 127 aa6.83□□□□□ -1.32
HIF3A-219ENST00000600879 FAM210AQ96ND0 272 aa6.83□□□□□ -1.32
HIF3A-219ENST00000600879 VGLL1Q99990 258 aa6.83□□□□□ -1.32
HIF3A-219ENST00000600879 TCEAL7Q9BRU2 100 aa6.83□□□□□ -1.32
HIF3A-219ENST00000600879 TIMM8BQ9Y5J9 83 aaPredicted RBP6.83□□□□□ -1.32
HIF3A-219ENST00000600879 GAGE12BA1L429 117 aa6.82□□□□□ -1.32
HIF3A-219ENST00000600879 GAGE7O76087 117 aa6.82□□□□□ -1.32
HIF3A-219ENST00000600879 GAGE12FP0CL80 117 aa6.82□□□□□ -1.32
HIF3A-219ENST00000600879 GAGE12GP0CL81 117 aa6.82□□□□□ -1.32
HIF3A-219ENST00000600879 GAGE12IP0CL82 117 aa6.82□□□□□ -1.32
HIF3A-219ENST00000600879 AKR1C3P42330 323 aa6.82□□□□□ -1.32
HIF3A-219ENST00000600879 C9orf47Q6ZRZ4 202 aa6.82□□□□□ -1.32
HIF3A-219ENST00000600879 C16orf74Q96GX8 76 aa6.82□□□□□ -1.32
HIF3A-219ENST00000600879 SGK494Q96LW2 274 aa6.82□□□□□ -1.32
HIF3A-219ENST00000600879 LINC00477Q96M19 166 aa6.82□□□□□ -1.32
HIF3A-219ENST00000600879 AGPAT4-IT1Q9H0P7 198 aa6.82□□□□□ -1.32
HIF3A-219ENST00000600879 TRAV8-1A0A0A6YYK1 113 aa6.81□□□□□ -1.32
HIF3A-219ENST00000600879 TRAV34A0A0B4J273 112 aa6.81□□□□□ -1.32
HIF3A-219ENST00000600879 PDE6DO43924 150 aa6.81□□□□□ -1.32
HIF3A-219ENST00000600879 CT45A10P0DMU9 189 aa6.81□□□□□ -1.32
HIF3A-219ENST00000600879 ZNF138P52744 262 aa6.81□□□□□ -1.32
HIF3A-219ENST00000600879 TAS2R60P59551 318 aa6.81□□□□□ -1.32
HIF3A-219ENST00000600879 UBE2G1P62253 170 aa6.81□□□□□ -1.32
HIF3A-219ENST00000600879 FLI1Q01543 452 aaPredicted RBP6.81□□□□□ -1.32
HIF3A-219ENST00000600879 CDPF1Q6NVV7 123 aa6.81□□□□□ -1.32
HIF3A-219ENST00000600879 TMEM75Q8N9X5 138 aa6.81□□□□□ -1.32
HIF3A-219ENST00000600879 Q8TAT8 98 aa6.81□□□□□ -1.32
HIF3A-219ENST00000600879 ZNF492Q9P255 531 aa6.81□□□□□ -1.32
HIF3A-219ENST00000600879 A0A087WTM6 91 aa6.8□□□□□ -1.32
HIF3A-219ENST00000600879 FBLL1A6NHQ2 334 aaKnown RBP6.8□□□□□ -1.32
HIF3A-219ENST00000600879 LEPP41159 167 aa6.8□□□□□ -1.32
HIF3A-219ENST00000600879 CEBPGP53567 150 aa6.8□□□□□ -1.32
HIF3A-219ENST00000600879 PRNTQ86SH4 94 aa6.8□□□□□ -1.32
HIF3A-219ENST00000600879 C11orf52Q96A22 123 aa6.8□□□□□ -1.32
HIF3A-219ENST00000600879 FMC1Q96HJ9 113 aa6.8□□□□□ -1.32
HIF3A-219ENST00000600879 LINC00479Q96M42 142 aa6.8□□□□□ -1.32
HIF3A-219ENST00000600879 ODF3Q96PU9 254 aa6.8□□□□□ -1.32
HIF3A-219ENST00000600879 NDFIP1Q9BT67 221 aa6.8□□□□□ -1.32
HIF3A-219ENST00000600879 MED9Q9NWA0 146 aa6.8□□□□□ -1.32
HIF3A-219ENST00000600879 PSG8Q9UQ74 426 aa6.8□□□□□ -1.32
HIF3A-219ENST00000600879 RAB19A4D1S5 217 aa6.79□□□□□ -1.32
HIF3A-219ENST00000600879 J3KRW8 73 aa6.79□□□□□ -1.32
HIF3A-219ENST00000600879 SIVA1O15304 175 aa6.79□□□□□ -1.32
HIF3A-219ENST00000600879 S100A9P06702 114 aaKnown RBP6.79□□□□□ -1.32
HIF3A-219ENST00000600879 SRP19P09132 144 aaKnown RBP6.79□□□□□ -1.32
HIF3A-219ENST00000600879 GCSHP23434 173 aa6.79□□□□□ -1.32
HIF3A-219ENST00000600879 KIR3DS1Q14943 382 aa6.79□□□□□ -1.32
HIF3A-219ENST00000600879 PEA15Q15121 130 aa6.79□□□□□ -1.32
HIF3A-219ENST00000600879 TMEM183BQ1AE95 376 aa6.79□□□□□ -1.32
HIF3A-219ENST00000600879 Q86TA4 180 aa6.79□□□□□ -1.32
HIF3A-219ENST00000600879 TMEM256Q8N2U0 113 aa6.79□□□□□ -1.32
HIF3A-219ENST00000600879 RNASE8Q8TDE3 154 aaKnown RBP6.79□□□□□ -1.32
HIF3A-219ENST00000600879 TMEM263Q8WUH6 116 aaKnown RBP6.79□□□□□ -1.32
HIF3A-219ENST00000600879 TREM1Q9NP99 234 aa6.79□□□□□ -1.32
HIF3A-219ENST00000600879 LENEPQ9Y5L5 61 aa6.79□□□□□ -1.32
HIF3A-219ENST00000600879 A0A096LPF7 62 aa6.78□□□□□ -1.32
HIF3A-219ENST00000600879 TMEM250H0YL14 139 aa6.78□□□□□ -1.32
HIF3A-219ENST00000600879 NDUFS6O75380 124 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms