RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 SMAD7O15105 426 aaKnown RBP8.87□□□□□ -0.99
ARHGEF1-220ENST00000600274 GAS8-AS1O95177 125 aa8.87□□□□□ -0.99
ARHGEF1-220ENST00000600274 EDN2P20800 178 aa8.87□□□□□ -0.99
ARHGEF1-220ENST00000600274 KLF5Q13887 457 aaPredicted RBP8.87□□□□□ -0.99
ARHGEF1-220ENST00000600274 SFTA2Q6UW10 78 aa8.87□□□□□ -0.99
ARHGEF1-220ENST00000600274 CSTL1Q9H114 145 aa8.87□□□□□ -0.99
ARHGEF1-220ENST00000600274 FBN2P35556 2912 aa8.87□□□□□ -0.99
ARHGEF1-220ENST00000600274 CLPSL1A2RUU4 121 aa8.87□□□□□ -0.99
ARHGEF1-220ENST00000600274 IGHV4-59P01825 116 aa8.87□□□□□ -0.99
ARHGEF1-220ENST00000600274 OR4X2Q8NGF9 303 aa8.87□□□□□ -0.99
ARHGEF1-220ENST00000600274 PIFOQ8TCI5 191 aa8.87□□□□□ -0.99
ARHGEF1-220ENST00000600274 TMEM97Q5BJF2 176 aa8.86□□□□□ -0.99
ARHGEF1-220ENST00000600274 PEF1Q9UBV8 284 aaKnown RBP8.86□□□□□ -0.99
ARHGEF1-220ENST00000600274 TRAV26-2A0A0B4J265 109 aa8.86□□□□□ -0.99
ARHGEF1-220ENST00000600274 S100A4P26447 101 aaKnown RBP8.86□□□□□ -0.99
ARHGEF1-220ENST00000600274 MRPL51Q4U2R6 128 aaKnown RBP8.86□□□□□ -0.99
ARHGEF1-220ENST00000600274 TRBV7-1A0A0A6YYK4 115 aa8.86□□□□□ -0.99
ARHGEF1-220ENST00000600274 RNF223E7ERA6 249 aa8.86□□□□□ -0.99
ARHGEF1-220ENST00000600274 M0R381 172 aa8.86□□□□□ -0.99
ARHGEF1-220ENST00000600274 SPANXN1Q5VSR9 72 aa8.86□□□□□ -0.99
ARHGEF1-220ENST00000600274 ORMDL3Q8N138 153 aa8.86□□□□□ -0.99
ARHGEF1-220ENST00000600274 NF1P21359 2839 aa8.86□□□□□ -0.99
ARHGEF1-220ENST00000600274 H3BVH4 76 aa8.85□□□□□ -0.99
ARHGEF1-220ENST00000600274 KHDC1LQ5JSQ8 128 aa8.85□□□□□ -0.99
ARHGEF1-220ENST00000600274 CFAP161Q6P656 301 aa8.85□□□□□ -0.99
ARHGEF1-220ENST00000600274 GTF2H5Q6ZYL4 71 aa8.85□□□□□ -0.99
ARHGEF1-220ENST00000600274 NPYP01303 97 aa8.85□□□□□ -0.99
ARHGEF1-220ENST00000600274 ZNF48Q96MX3 618 aaPredicted RBP8.85□□□□□ -0.99
ARHGEF1-220ENST00000600274 SIGLEC8Q9NYZ4 499 aa8.85□□□□□ -0.99
ARHGEF1-220ENST00000600274 K7EP13 123 aa8.84□□□□□ -0.99
ARHGEF1-220ENST00000600274 KIR3DS1Q14943 382 aa8.84□□□□□ -0.99
ARHGEF1-220ENST00000600274 FAM104BQ5XKR9 115 aa8.84□□□□□ -0.99
ARHGEF1-220ENST00000600274 BBC3Q96PG8 261 aaPredicted RBP8.84□□□□□ -0.99
ARHGEF1-220ENST00000600274 CHD6Q8TD26 2715 aa8.84□□□□□ -0.99
ARHGEF1-220ENST00000600274 SCGB2A2Q13296 93 aa8.84□□□□□ -0.99
ARHGEF1-220ENST00000600274 DEFB112Q30KQ8 113 aa8.84□□□□□ -0.99
ARHGEF1-220ENST00000600274 SAMD13Q5VXD3 122 aa8.84□□□□□ -0.99
ARHGEF1-220ENST00000600274 CHCHD1Q96BP2 118 aaKnown RBP8.84□□□□□ -0.99
ARHGEF1-220ENST00000600274 A6NDN8 102 aa8.83□□□□□ -1
ARHGEF1-220ENST00000600274 B4DSR2 109 aa8.83□□□□□ -1
ARHGEF1-220ENST00000600274 COX6B1P14854 86 aa8.83□□□□□ -1
ARHGEF1-220ENST00000600274 SLC50A1Q9BRV3 221 aa8.83□□□□□ -1
ARHGEF1-220ENST00000600274 NPFFR1Q9GZQ6 430 aa8.83□□□□□ -1
ARHGEF1-220ENST00000600274 C11orf21Q9P2W6 132 aa8.83□□□□□ -1
ARHGEF1-220ENST00000600274 JMJD1CQ15652 2540 aa8.83□□□□□ -1
ARHGEF1-220ENST00000600274 RNASE4P34096 147 aaKnown RBP8.83□□□□□ -1
ARHGEF1-220ENST00000600274 PET117Q6UWS5 81 aa8.83□□□□□ -1
ARHGEF1-220ENST00000600274 PCP2Q8IVA1 136 aa8.83□□□□□ -1
ARHGEF1-220ENST00000600274 SPCS1Q9Y6A9 102 aa8.83□□□□□ -1
ARHGEF1-220ENST00000600274 TRAV8-2A0A0B4J237 113 aa8.83□□□□□ -1
ARHGEF1-220ENST00000600274 Q6AWC8 147 aa8.83□□□□□ -1
ARHGEF1-220ENST00000600274 C20orf173Q96LM9 149 aa8.83□□□□□ -1
ARHGEF1-220ENST00000600274 RHPN1-AS1Q9BWJ2 59 aa8.83□□□□□ -1
ARHGEF1-220ENST00000600274 TMEM160Q9NX00 188 aa8.83□□□□□ -1
ARHGEF1-220ENST00000600274 FLNAP21333 2647 aaKnown RBP8.82□□□□□ -1
ARHGEF1-220ENST00000600274 HTN1P15515 57 aa8.82□□□□□ -1
ARHGEF1-220ENST00000600274 RAB9AP51151 201 aa8.82□□□□□ -1
ARHGEF1-220ENST00000600274 OR2K2Q8NGT1 345 aa8.82□□□□□ -1
ARHGEF1-220ENST00000600274 BEX4Q9NWD9 120 aaPredicted RBP8.82□□□□□ -1
ARHGEF1-220ENST00000600274 MGPP08493 103 aa8.82□□□□□ -1
ARHGEF1-220ENST00000600274 KRTAP10-9P60411 292 aa8.82□□□□□ -1
ARHGEF1-220ENST00000600274 DEFB125Q8N687 156 aa8.82□□□□□ -1
ARHGEF1-220ENST00000600274 OR10J6PQ8NGY7 276 aa8.82□□□□□ -1
ARHGEF1-220ENST00000600274 IGKV3D-20A0A0C4DH25 116 aa8.81□□□□□ -1
ARHGEF1-220ENST00000600274 AGRNO00468 2067 aa8.81□□□□□ -1
ARHGEF1-220ENST00000600274 A0A0G2JLM5 398 aa8.81□□□□□ -1
ARHGEF1-220ENST00000600274 K7ERJ3 54 aa8.81□□□□□ -1
ARHGEF1-220ENST00000600274 CD5LO43866 347 aa8.81□□□□□ -1
ARHGEF1-220ENST00000600274 PRR9Q5T870 116 aa8.81□□□□□ -1
ARHGEF1-220ENST00000600274 GTSCR1Q86UQ5 136 aa8.81□□□□□ -1
ARHGEF1-220ENST00000600274 NHP2Q9NX24 153 aaKnown RBP8.81□□□□□ -1
ARHGEF1-220ENST00000600274 DKK2Q9UBU2 259 aa8.81□□□□□ -1
ARHGEF1-220ENST00000600274 HIST2H2BCQ6DN03 193 aa8.8□□□□□ -1
ARHGEF1-220ENST00000600274 FAM223BA6NKX1 122 aa8.8□□□□□ -1
ARHGEF1-220ENST00000600274 ZNF688P0C7X2 276 aa8.8□□□□□ -1
ARHGEF1-220ENST00000600274 RPS20P60866 119 aaKnown RBP8.8□□□□□ -1
ARHGEF1-220ENST00000600274 ANXA2RQ3ZCQ2 193 aa8.8□□□□□ -1
ARHGEF1-220ENST00000600274 FAM223AQ8IWN6 122 aa8.8□□□□□ -1
ARHGEF1-220ENST00000600274 C11orf44Q8N8P7 122 aa8.8□□□□□ -1
ARHGEF1-220ENST00000600274 IFI27L1Q96BM0 104 aa8.8□□□□□ -1
ARHGEF1-220ENST00000600274 ZNF747Q9BV97 191 aa8.8□□□□□ -1
ARHGEF1-220ENST00000600274 TRBV6-1A0A0K0K1D8 114 aa8.8□□□□□ -1
ARHGEF1-220ENST00000600274 FOXC2Q99958 501 aa8.8□□□□□ -1
ARHGEF1-220ENST00000600274 NDUFS8O00217 210 aa8.79□□□□□ -1
ARHGEF1-220ENST00000600274 FABP2P12104 132 aa8.79□□□□□ -1
ARHGEF1-220ENST00000600274 LEPP41159 167 aa8.79□□□□□ -1
ARHGEF1-220ENST00000600274 MAP1LC3AQ9H492 121 aa8.79□□□□□ -1
ARHGEF1-220ENST00000600274 SCRT2Q9NQ03 307 aa8.79□□□□□ -1
ARHGEF1-220ENST00000600274 PPBPP02775 128 aa8.79□□□□□ -1
ARHGEF1-220ENST00000600274 DUX3Q96PT4 197 aa8.79□□□□□ -1
ARHGEF1-220ENST00000600274 A0A1B0GW15 77 aa8.79□□□□□ -1
ARHGEF1-220ENST00000600274 A6NDX4 124 aa8.79□□□□□ -1
ARHGEF1-220ENST00000600274 IGHG2P01859 326 aa8.79□□□□□ -1
ARHGEF1-220ENST00000600274 HECTD1Q9ULT8 2610 aa8.78□□□□□ -1
ARHGEF1-220ENST00000600274 COX8AP10176 69 aa8.78□□□□□ -1
ARHGEF1-220ENST00000600274 GNRH2O43555 120 aa8.78□□□□□ -1
ARHGEF1-220ENST00000600274 TNFRSF6BO95407 300 aa8.78□□□□□ -1
ARHGEF1-220ENST00000600274 SYNJ2BPP57105 145 aa8.78□□□□□ -1
ARHGEF1-220ENST00000600274 DEFB136Q30KP8 78 aa8.78□□□□□ -1
ARHGEF1-220ENST00000600274 C14orf178Q8N769 122 aaPredicted RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms