RNA–Protein interactions for RNA: ENST00000600078.5

RAB4B-206, Transcript of RAB4B, member RAS oncogene family, human

TSL 5

Gene RAB4B, Length 715 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB4B-206	ENST00000600078	DEFB130A	P0DP74	79 aa		13.56	□□□□□ -0.24
RAB4B-206	ENST00000600078	ZNF80	P51504	273 aa	Predicted RBP	13.56	□□□□□ -0.24
RAB4B-206	ENST00000600078	IBA57	Q5T440	356 aa	Known RBP	13.56	□□□□□ -0.24
RAB4B-206	ENST00000600078	C2CD4C	Q8TF44	421 aa		13.56	□□□□□ -0.24
RAB4B-206	ENST00000600078	DEFB131B	A0A096LNP1	70 aa		13.55	□□□□□ -0.24
RAB4B-206	ENST00000600078	PFN1	P07737	140 aa	Known RBP	13.55	□□□□□ -0.24
RAB4B-206	ENST00000600078	BCL2	P10415	239 aa		13.55	□□□□□ -0.24
RAB4B-206	ENST00000600078	TAGLN2	P37802	199 aa	Known RBP	13.55	□□□□□ -0.24
RAB4B-206	ENST00000600078	DAZ2	Q13117	558 aa	Known RBP	13.55	□□□□□ -0.24
RAB4B-206	ENST00000600078	TDRG1	Q3Y452	100 aa		13.55	□□□□□ -0.24
RAB4B-206	ENST00000600078	ABCA13	Q86UQ4	5058 aa		13.55	□□□□□ -0.24
RAB4B-206	ENST00000600078	TRGV11	A0A075B6L2	103 aa		13.54	□□□□□ -0.24
RAB4B-206	ENST00000600078	LTA	P01374	205 aa		13.54	□□□□□ -0.24
RAB4B-206	ENST00000600078	TCL1A	P56279	114 aa		13.54	□□□□□ -0.24
RAB4B-206	ENST00000600078	MEF2B	Q02080	365 aa	Predicted RBP	13.54	□□□□□ -0.24
RAB4B-206	ENST00000600078	TMEM183A	Q8IXX5	376 aa		13.54	□□□□□ -0.24
RAB4B-206	ENST00000600078	LYPD6B	Q8NI32	183 aa		13.54	□□□□□ -0.24
RAB4B-206	ENST00000600078	KCNS1	Q96KK3	526 aa		13.54	□□□□□ -0.24
RAB4B-206	ENST00000600078	VAX2	Q9UIW0	290 aa		13.54	□□□□□ -0.24
RAB4B-206	ENST00000600078	ZNF415	Q09FC8	603 aa		13.53	□□□□□ -0.24
RAB4B-206	ENST00000600078	COX8C	Q7Z4L0	72 aa		13.53	□□□□□ -0.24
RAB4B-206	ENST00000600078	C11orf52	Q96A22	123 aa		13.53	□□□□□ -0.24
RAB4B-206	ENST00000600078	FABP5P3	A8MUU1	101 aa		13.52	□□□□□ -0.25
RAB4B-206	ENST00000600078	PDE6D	O43924	150 aa		13.52	□□□□□ -0.25
RAB4B-206	ENST00000600078	HTN3	P15516	51 aa		13.52	□□□□□ -0.25
RAB4B-206	ENST00000600078	TEX261	Q6UWH6	196 aa		13.52	□□□□□ -0.25
RAB4B-206	ENST00000600078	LINC00612	Q8N6U2	182 aa		13.52	□□□□□ -0.25
RAB4B-206	ENST00000600078	SDF2L1	Q9HCN8	221 aa		13.52	□□□□□ -0.25
RAB4B-206	ENST00000600078	MDFIC	Q9P1T7	246 aa		13.52	□□□□□ -0.25
RAB4B-206	ENST00000600078	GAGE12B	A1L429	117 aa		13.51	□□□□□ -0.25
RAB4B-206	ENST00000600078	IGLL5	B9A064	214 aa		13.51	□□□□□ -0.25
RAB4B-206	ENST00000600078	GNRH2	O43555	120 aa		13.51	□□□□□ -0.25
RAB4B-206	ENST00000600078	GAGE7	O76087	117 aa		13.51	□□□□□ -0.25
RAB4B-206	ENST00000600078	GAGE12F	P0CL80	117 aa		13.51	□□□□□ -0.25
RAB4B-206	ENST00000600078	GAGE12G	P0CL81	117 aa		13.51	□□□□□ -0.25
RAB4B-206	ENST00000600078	GAGE12I	P0CL82	117 aa		13.51	□□□□□ -0.25
RAB4B-206	ENST00000600078	BAGE2	Q86Y30	109 aa		13.51	□□□□□ -0.25
RAB4B-206	ENST00000600078	ZC2HC1A	Q96GY0	325 aa		13.51	□□□□□ -0.25
RAB4B-206	ENST00000600078	C11orf21	Q9P2W6	132 aa		13.51	□□□□□ -0.25
RAB4B-206	ENST00000600078	TYMS	P04818	313 aa		13.5	□□□□□ -0.25
RAB4B-206	ENST00000600078	RPL35	P42766	123 aa	Known RBP	13.5	□□□□□ -0.25
RAB4B-206	ENST00000600078		Q6ZTI0	123 aa		13.5	□□□□□ -0.25
RAB4B-206	ENST00000600078	TRGV1	A0A0A0MS02	117 aa		13.49	□□□□□ -0.25
RAB4B-206	ENST00000600078	IGHV3-16	A0A0C4DH30	117 aa		13.49	□□□□□ -0.25
RAB4B-206	ENST00000600078	RBFOX3	A6NFN3	312 aa		13.49	□□□□□ -0.25
RAB4B-206	ENST00000600078	SPINK4	O60575	86 aa		13.49	□□□□□ -0.25
RAB4B-206	ENST00000600078	ATP5G1	P05496	136 aa		13.49	□□□□□ -0.25
RAB4B-206	ENST00000600078	CRIP1	P50238	77 aa		13.49	□□□□□ -0.25
RAB4B-206	ENST00000600078	SPX	Q9BT56	116 aa		13.49	□□□□□ -0.25
RAB4B-206	ENST00000600078	MED9	Q9NWA0	146 aa		13.49	□□□□□ -0.25
RAB4B-206	ENST00000600078	MUC4	Q99102	2169 aa		13.49	□□□□□ -0.25
RAB4B-206	ENST00000600078	PKHD1	P08F94	4074 aa		13.49	□□□□□ -0.25
RAB4B-206	ENST00000600078	TCTA	P57738	103 aa		13.48	□□□□□ -0.25
RAB4B-206	ENST00000600078	LGALS9B	Q3B8N2	356 aa		13.48	□□□□□ -0.25
RAB4B-206	ENST00000600078	FAM162B	Q5T6X4	162 aa		13.48	□□□□□ -0.25
RAB4B-206	ENST00000600078	NHLRC2	Q8NBF2	726 aa		13.48	□□□□□ -0.25
RAB4B-206	ENST00000600078	DERL1	Q9BUN8	251 aa		13.48	□□□□□ -0.25
RAB4B-206	ENST00000600078	IGHV4-4	A0A075B6R2	117 aa		13.47	□□□□□ -0.25
RAB4B-206	ENST00000600078	SH2D1A	O60880	128 aa		13.47	□□□□□ -0.25
RAB4B-206	ENST00000600078	ZNF674	Q2M3X9	581 aa		13.47	□□□□□ -0.25
RAB4B-206	ENST00000600078	ZNF506	Q5JVG8	444 aa		13.47	□□□□□ -0.25
RAB4B-206	ENST00000600078	MLST8	Q9BVC4	326 aa		13.47	□□□□□ -0.25
RAB4B-206	ENST00000600078	MRPL16	Q9NX20	251 aa	Known RBP	13.47	□□□□□ -0.25
RAB4B-206	ENST00000600078	VPS13D	Q5THJ4	4388 aa		13.46	□□□□□ -0.25
RAB4B-206	ENST00000600078	DNAH6	Q9C0G6	4158 aa		13.46	□□□□□ -0.25
RAB4B-206	ENST00000600078	TRGV2	A0A075B6R0	118 aa		13.46	□□□□□ -0.25
RAB4B-206	ENST00000600078	IGKV3D-20	A0A0C4DH25	116 aa		13.46	□□□□□ -0.25
RAB4B-206	ENST00000600078		F5H768	121 aa		13.46	□□□□□ -0.25
RAB4B-206	ENST00000600078	ORM1	P02763	201 aa		13.46	□□□□□ -0.25
RAB4B-206	ENST00000600078	LGALS9C	Q6DKI2	356 aa		13.46	□□□□□ -0.25
RAB4B-206	ENST00000600078	FAM210B	Q96KR6	192 aa		13.46	□□□□□ -0.25
RAB4B-206	ENST00000600078	APLN	Q9ULZ1	77 aa		13.46	□□□□□ -0.25
RAB4B-206	ENST00000600078	C18orf15	Q96N68	181 aa		13.45	□□□□□ -0.26
RAB4B-206	ENST00000600078	RAB19	A4D1S5	217 aa		13.44	□□□□□ -0.26
RAB4B-206	ENST00000600078		B4DEV8	164 aa		13.44	□□□□□ -0.26
RAB4B-206	ENST00000600078	CENPW	Q5EE01	88 aa		13.44	□□□□□ -0.26
RAB4B-206	ENST00000600078	TOR2A	Q5JU69	321 aa		13.44	□□□□□ -0.26
RAB4B-206	ENST00000600078	PCNP	Q8WW12	178 aa	Known RBP	13.44	□□□□□ -0.26
RAB4B-206	ENST00000600078	FAM210A	Q96ND0	272 aa		13.44	□□□□□ -0.26
RAB4B-206	ENST00000600078	NDUFAF3	Q9BU61	184 aa		13.44	□□□□□ -0.26
RAB4B-206	ENST00000600078	EIF5A2	Q9GZV4	153 aa	Known RBP	13.44	□□□□□ -0.26
RAB4B-206	ENST00000600078	KRBOX1	C9JBD0	128 aa		13.43	□□□□□ -0.26
RAB4B-206	ENST00000600078		M0R036	132 aa		13.43	□□□□□ -0.26
RAB4B-206	ENST00000600078		M0R2P5	195 aa		13.43	□□□□□ -0.26
RAB4B-206	ENST00000600078	MED14OS	P0DP75	135 aa		13.43	□□□□□ -0.26
RAB4B-206	ENST00000600078	GNG4	P50150	75 aa		13.43	□□□□□ -0.26
RAB4B-206	ENST00000600078	RASL10A	Q92737	203 aa		13.43	□□□□□ -0.26
RAB4B-206	ENST00000600078	TMEM250	H0YL14	139 aa		13.42	□□□□□ -0.26
RAB4B-206	ENST00000600078	S100A4	P26447	101 aa	Known RBP	13.42	□□□□□ -0.26
RAB4B-206	ENST00000600078	ASIP	P42127	132 aa		13.42	□□□□□ -0.26
RAB4B-206	ENST00000600078	LINC01559	Q495D7	138 aa		13.42	□□□□□ -0.26
RAB4B-206	ENST00000600078	PRR27	Q6MZM9	219 aa		13.42	□□□□□ -0.26
RAB4B-206	ENST00000600078	TMEM88	Q6PEY1	159 aa		13.42	□□□□□ -0.26
RAB4B-206	ENST00000600078	SMIM12	Q96EX1	92 aa		13.42	□□□□□ -0.26
RAB4B-206	ENST00000600078	C9orf85	Q96MD7	179 aa		13.42	□□□□□ -0.26
RAB4B-206	ENST00000600078	IGLV2-8	P01709	118 aa		13.41	□□□□□ -0.26
RAB4B-206	ENST00000600078	RNASE3	P12724	160 aa	Known RBP	13.41	□□□□□ -0.26
RAB4B-206	ENST00000600078	OR5I1	Q13606	314 aa		13.41	□□□□□ -0.26
RAB4B-206	ENST00000600078	NDUFS6	O75380	124 aa	Known RBP	13.4	□□□□□ -0.26
RAB4B-206	ENST00000600078	MGST1	P10620	155 aa	Known RBP	13.4	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms