RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 GCGP01275 180 aa9.88□□□□□ -0.83
LIG1-218ENST00000599322 IGHV3-53P01767 116 aa9.88□□□□□ -0.83
LIG1-218ENST00000599322 SEC11BP0C7V7 166 aa9.88□□□□□ -0.83
LIG1-218ENST00000599322 FGF8P55075 233 aaPredicted RBP9.88□□□□□ -0.83
LIG1-218ENST00000599322 Q6ZQT7 251 aa9.88□□□□□ -0.83
LIG1-218ENST00000599322 PCNPQ8WW12 178 aaKnown RBP9.88□□□□□ -0.83
LIG1-218ENST00000599322 CYTL1Q9NRR1 136 aa9.88□□□□□ -0.83
LIG1-218ENST00000599322 MDFICQ9P1T7 246 aa9.88□□□□□ -0.83
LIG1-218ENST00000599322 HHLA3Q9XRX5 114 aa9.88□□□□□ -0.83
LIG1-218ENST00000599322 ICOSQ9Y6W8 199 aa9.88□□□□□ -0.83
LIG1-218ENST00000599322 GGTLC3B5MD39 225 aa9.87□□□□□ -0.83
LIG1-218ENST00000599322 M0R2P5 195 aa9.87□□□□□ -0.83
LIG1-218ENST00000599322 BCL2L11O43521 198 aa9.87□□□□□ -0.83
LIG1-218ENST00000599322 UBE2G1P62253 170 aa9.87□□□□□ -0.83
LIG1-218ENST00000599322 C1orf134Q5TEV5 83 aa9.87□□□□□ -0.83
LIG1-218ENST00000599322 CST9LP1Q5W188 147 aa9.87□□□□□ -0.83
LIG1-218ENST00000599322 EIF5AL1Q6IS14 154 aaKnown RBP9.87□□□□□ -0.83
LIG1-218ENST00000599322 TCEAL7Q9BRU2 100 aa9.87□□□□□ -0.83
LIG1-218ENST00000599322 PCLOQ9Y6V0 5065 aa9.87□□□□□ -0.83
LIG1-218ENST00000599322 FAT2Q9NYQ8 4349 aa9.87□□□□□ -0.83
LIG1-218ENST00000599322 PEX7O00628 323 aa9.86□□□□□ -0.83
LIG1-218ENST00000599322 GNRH2O43555 120 aa9.86□□□□□ -0.83
LIG1-218ENST00000599322 PFN1P07737 140 aaKnown RBP9.86□□□□□ -0.83
LIG1-218ENST00000599322 TPT1P13693 172 aaKnown RBP9.86□□□□□ -0.83
LIG1-218ENST00000599322 ZNF726P1Q15940 193 aa9.86□□□□□ -0.83
LIG1-218ENST00000599322 MRPL23Q16540 153 aaKnown RBP9.86□□□□□ -0.83
LIG1-218ENST00000599322 TTC32Q5I0X7 151 aa9.86□□□□□ -0.83
LIG1-218ENST00000599322 DPPA3Q6W0C5 159 aa9.86□□□□□ -0.83
LIG1-218ENST00000599322 OR4C5Q8NGB2 326 aa9.86□□□□□ -0.83
LIG1-218ENST00000599322 FAM213BQ8TBF2 198 aa9.86□□□□□ -0.83
LIG1-218ENST00000599322 SFT2D1Q8WV19 159 aa9.86□□□□□ -0.83
LIG1-218ENST00000599322 RASL10AQ92737 203 aa9.86□□□□□ -0.83
LIG1-218ENST00000599322 LINC00588Q9Y4M8 146 aa9.86□□□□□ -0.83
LIG1-218ENST00000599322 DNAH17Q9UFH2 4485 aa9.86□□□□□ -0.83
LIG1-218ENST00000599322 DNAH2Q9P225 4427 aa9.86□□□□□ -0.83
LIG1-218ENST00000599322 IGHV3-16A0A0C4DH30 117 aa9.85□□□□□ -0.83
LIG1-218ENST00000599322 PRSS29PA6NIE9 313 aa9.85□□□□□ -0.83
LIG1-218ENST00000599322 FAM74A7A6NL05 159 aa9.85□□□□□ -0.83
LIG1-218ENST00000599322 FABP5P3A8MUU1 101 aa9.85□□□□□ -0.83
LIG1-218ENST00000599322 TEX46H3BTG2 121 aa9.85□□□□□ -0.83
LIG1-218ENST00000599322 S100A4P26447 101 aaKnown RBP9.85□□□□□ -0.83
LIG1-218ENST00000599322 TVP23CQ96ET8 276 aa9.85□□□□□ -0.83
LIG1-218ENST00000599322 C8orf49Q96NF6 230 aa9.85□□□□□ -0.83
LIG1-218ENST00000599322 Q9H8V8 135 aa9.85□□□□□ -0.83
LIG1-218ENST00000599322 ZFP30Q9Y2G7 519 aa9.85□□□□□ -0.83
LIG1-218ENST00000599322 TRAV4A0A0B4J268 109 aa9.84□□□□□ -0.83
LIG1-218ENST00000599322 NBDYA0A0U1RRE5 68 aa9.84□□□□□ -0.83
LIG1-218ENST00000599322 CIDEAO60543 219 aa9.84□□□□□ -0.83
LIG1-218ENST00000599322 ORM1P02763 201 aa9.84□□□□□ -0.83
LIG1-218ENST00000599322 TYMSP04818 313 aa9.84□□□□□ -0.83
LIG1-218ENST00000599322 FHITP49789 147 aa9.84□□□□□ -0.83
LIG1-218ENST00000599322 TMUB2Q71RG4 321 aa9.84□□□□□ -0.83
LIG1-218ENST00000599322 ZNRF2Q8NHG8 242 aa9.84□□□□□ -0.83
LIG1-218ENST00000599322 ARL2-SNX15V9GYD0 113 aa9.84□□□□□ -0.83
LIG1-218ENST00000599322 A0A096LPF7 62 aa9.83□□□□□ -0.84
LIG1-218ENST00000599322 TRAV34A0A0B4J273 112 aa9.83□□□□□ -0.84
LIG1-218ENST00000599322 C9JCJ5 164 aa9.83□□□□□ -0.84
LIG1-218ENST00000599322 H2AFB1P0C5Y9 115 aa9.83□□□□□ -0.84
LIG1-218ENST00000599322 SRIP30626 198 aa9.83□□□□□ -0.84
LIG1-218ENST00000599322 CRYBA4P53673 196 aa9.83□□□□□ -0.84
LIG1-218ENST00000599322 LGALSLQ3ZCW2 172 aaPredicted RBP9.83□□□□□ -0.84
LIG1-218ENST00000599322 ZNF876PQ49A33 203 aa9.83□□□□□ -0.84
LIG1-218ENST00000599322 Q6ZR54 194 aa9.83□□□□□ -0.84
LIG1-218ENST00000599322 OR11H4Q8NGC9 324 aa9.83□□□□□ -0.84
LIG1-218ENST00000599322 FMC1Q96HJ9 113 aa9.83□□□□□ -0.84
LIG1-218ENST00000599322 VSIG2Q96IQ7 327 aa9.83□□□□□ -0.84
LIG1-218ENST00000599322 MRPS16Q9Y3D3 137 aaKnown RBP9.83□□□□□ -0.84
LIG1-218ENST00000599322 DYNC1H1Q14204 4646 aaKnown RBP9.83□□□□□ -0.84
LIG1-218ENST00000599322 IGLV2-11P01706 119 aa9.82□□□□□ -0.84
LIG1-218ENST00000599322 S100A9P06702 114 aaKnown RBP9.82□□□□□ -0.84
LIG1-218ENST00000599322 AKR1C3P42330 323 aa9.82□□□□□ -0.84
LIG1-218ENST00000599322 FHL2Q14192 279 aa9.82□□□□□ -0.84
LIG1-218ENST00000599322 ESRGQ1W209 222 aa9.82□□□□□ -0.84
LIG1-218ENST00000599322 NEGR1Q7Z3B1 354 aa9.82□□□□□ -0.84
LIG1-218ENST00000599322 MBD3L1Q8WWY6 194 aa9.82□□□□□ -0.84
LIG1-218ENST00000599322 LINC00479Q96M42 142 aa9.82□□□□□ -0.84
LIG1-218ENST00000599322 TXNDC17Q9BRA2 123 aa9.82□□□□□ -0.84
LIG1-218ENST00000599322 SFTA3P0C7M3 94 aa9.81□□□□□ -0.84
LIG1-218ENST00000599322 ASIPP42127 132 aa9.81□□□□□ -0.84
LIG1-218ENST00000599322 RAB5CP51148 216 aa9.81□□□□□ -0.84
LIG1-218ENST00000599322 ZNF80P51504 273 aaPredicted RBP9.81□□□□□ -0.84
LIG1-218ENST00000599322 SH2D6Q7Z4S9 175 aa9.81□□□□□ -0.84
LIG1-218ENST00000599322 C6orf223Q8N319 242 aa9.81□□□□□ -0.84
LIG1-218ENST00000599322 ZNF479Q96JC4 524 aa9.81□□□□□ -0.84
LIG1-218ENST00000599322 UPK3BQ9BT76 320 aa9.81□□□□□ -0.84
LIG1-218ENST00000599322 PKHD1P08F94 4074 aa9.81□□□□□ -0.84
LIG1-218ENST00000599322 A0A1B0GV50 99 aa9.8□□□□□ -0.84
LIG1-218ENST00000599322 PAGE4O60829 102 aa9.8□□□□□ -0.84
LIG1-218ENST00000599322 Q86TA4 180 aa9.8□□□□□ -0.84
LIG1-218ENST00000599322 TRAV9-2A0A087WT02 112 aa9.79□□□□□ -0.84
LIG1-218ENST00000599322 A0A1W2PPQ1 181 aa9.79□□□□□ -0.84
LIG1-218ENST00000599322 B4DEV8 164 aa9.79□□□□□ -0.84
LIG1-218ENST00000599322 RTL8CO15255 209 aa9.79□□□□□ -0.84
LIG1-218ENST00000599322 GYPEP15421 78 aa9.79□□□□□ -0.84
LIG1-218ENST00000599322 FAM162BQ5T6X4 162 aa9.79□□□□□ -0.84
LIG1-218ENST00000599322 TCTE3Q8IZS6 198 aa9.79□□□□□ -0.84
LIG1-218ENST00000599322 NHLRC2Q8NBF2 726 aa9.79□□□□□ -0.84
LIG1-218ENST00000599322 SYT8Q8NBV8 401 aa9.79□□□□□ -0.84
LIG1-218ENST00000599322 PRADC1Q9BSG0 188 aa9.79□□□□□ -0.84
LIG1-218ENST00000599322 MUC4Q99102 2169 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms