RNA–Protein interactions for RNA: ENST00000598886.1

SMG9-208, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 681 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-208ENST00000598886 SRIP30626 198 aa10.57□□□□□ -0.72
SMG9-208ENST00000598886 FAM159AQ6UWV7 190 aa10.57□□□□□ -0.72
SMG9-208ENST00000598886 NFE4Q86UQ8 179 aa10.57□□□□□ -0.72
SMG9-208ENST00000598886 ARL6IP6Q8N6S5 226 aa10.57□□□□□ -0.72
SMG9-208ENST00000598886 SMIM3Q9BZL3 60 aa10.57□□□□□ -0.72
SMG9-208ENST00000598886 MSRB1Q9NZV6 116 aa10.57□□□□□ -0.72
SMG9-208ENST00000598886 DMBT1Q9UGM3 2413 aaPredicted RBP10.57□□□□□ -0.72
SMG9-208ENST00000598886 TRAV8-1A0A0A6YYK1 113 aa10.56□□□□□ -0.72
SMG9-208ENST00000598886 G3V3Q6 166 aa10.56□□□□□ -0.72
SMG9-208ENST00000598886 ORM1P02763 201 aa10.56□□□□□ -0.72
SMG9-208ENST00000598886 TYMSP04818 313 aa10.56□□□□□ -0.72
SMG9-208ENST00000598886 TAS2R45P59539 299 aa10.56□□□□□ -0.72
SMG9-208ENST00000598886 OR2T35Q8NGX2 323 aa10.56□□□□□ -0.72
SMG9-208ENST00000598886 HYLS1Q96M11 299 aa10.56□□□□□ -0.72
SMG9-208ENST00000598886 MBD2Q9UBB5 411 aa10.56□□□□□ -0.72
SMG9-208ENST00000598886 DNAH8Q96JB1 4490 aa10.56□□□□□ -0.72
SMG9-208ENST00000598886 PGPA6NDG6 321 aa10.55□□□□□ -0.72
SMG9-208ENST00000598886 F6UZH7 168 aa10.55□□□□□ -0.72
SMG9-208ENST00000598886 TIRAPP58753 221 aa10.55□□□□□ -0.72
SMG9-208ENST00000598886 RAB2AP61019 212 aa10.55□□□□□ -0.72
SMG9-208ENST00000598886 GOLT1AQ6ZVE7 132 aa10.55□□□□□ -0.72
SMG9-208ENST00000598886 C11orf21Q9P2W6 132 aa10.55□□□□□ -0.72
SMG9-208ENST00000598886 EPM2AB3EWF7 344 aa10.54□□□□□ -0.72
SMG9-208ENST00000598886 M0R2P5 195 aa10.54□□□□□ -0.72
SMG9-208ENST00000598886 GATA1P15976 413 aaPredicted RBP10.54□□□□□ -0.72
SMG9-208ENST00000598886 GNG5P63218 68 aa10.54□□□□□ -0.72
SMG9-208ENST00000598886 PQLC2Q6ZP29 291 aa10.54□□□□□ -0.72
SMG9-208ENST00000598886 SUN5Q8TC36 379 aa10.54□□□□□ -0.72
SMG9-208ENST00000598886 NAGKQ9UJ70 344 aa10.54□□□□□ -0.72
SMG9-208ENST00000598886 TRAV21A0A0B4J279 112 aa10.53□□□□□ -0.72
SMG9-208ENST00000598886 LRCOL1A6NCL2 159 aa10.53□□□□□ -0.72
SMG9-208ENST00000598886 C9JCJ5 164 aa10.53□□□□□ -0.72
SMG9-208ENST00000598886 SMLR1H3BR10 107 aa10.53□□□□□ -0.72
SMG9-208ENST00000598886 IFNA5P01569 189 aa10.53□□□□□ -0.72
SMG9-208ENST00000598886 PET100P0DJ07 73 aa10.53□□□□□ -0.72
SMG9-208ENST00000598886 ZNF80P51504 273 aaPredicted RBP10.53□□□□□ -0.72
SMG9-208ENST00000598886 OR4C5Q8NGB2 326 aa10.53□□□□□ -0.72
SMG9-208ENST00000598886 RPH3ALQ9UNE2 315 aa10.53□□□□□ -0.72
SMG9-208ENST00000598886 TRAV9-2A0A087WT02 112 aa10.52□□□□□ -0.73
SMG9-208ENST00000598886 EREGO14944 169 aa10.52□□□□□ -0.73
SMG9-208ENST00000598886 IGLV2-11P01706 119 aa10.52□□□□□ -0.73
SMG9-208ENST00000598886 DPPA3Q6W0C5 159 aa10.52□□□□□ -0.73
SMG9-208ENST00000598886 SCGB1C1Q8TD33 95 aa10.52□□□□□ -0.73
SMG9-208ENST00000598886 PCNPQ8WW12 178 aaKnown RBP10.52□□□□□ -0.73
SMG9-208ENST00000598886 TXNDC17Q9BRA2 123 aa10.52□□□□□ -0.73
SMG9-208ENST00000598886 HMSDA8MTL9 139 aa10.51□□□□□ -0.73
SMG9-208ENST00000598886 HMGB3O15347 200 aaKnown RBP10.51□□□□□ -0.73
SMG9-208ENST00000598886 CRYGDP07320 174 aa10.51□□□□□ -0.73
SMG9-208ENST00000598886 STAG3L2P0CL84 134 aa10.51□□□□□ -0.73
SMG9-208ENST00000598886 STAG3L3P0CL85 134 aa10.51□□□□□ -0.73
SMG9-208ENST00000598886 ARL14EPLP0DKL9 152 aa10.51□□□□□ -0.73
SMG9-208ENST00000598886 EVI2AP22794 236 aa10.51□□□□□ -0.73
SMG9-208ENST00000598886 NKX2-5P52952 324 aaPredicted RBP10.51□□□□□ -0.73
SMG9-208ENST00000598886 ACOT6Q3I5F7 207 aaPredicted RBP10.51□□□□□ -0.73
SMG9-208ENST00000598886 OR11H4Q8NGC9 324 aa10.51□□□□□ -0.73
SMG9-208ENST00000598886 CMTM2Q8TAZ6 248 aa10.51□□□□□ -0.73
SMG9-208ENST00000598886 C9orf85Q96MD7 179 aa10.51□□□□□ -0.73
SMG9-208ENST00000598886 TREM1Q9NP99 234 aa10.51□□□□□ -0.73
SMG9-208ENST00000598886 RS1O15537 224 aa10.5□□□□□ -0.73
SMG9-208ENST00000598886 Q5BKY6 102 aa10.5□□□□□ -0.73
SMG9-208ENST00000598886 LINC01556Q5JQF7 62 aa10.5□□□□□ -0.73
SMG9-208ENST00000598886 FAM74A1Q5RGS3 127 aa10.5□□□□□ -0.73
SMG9-208ENST00000598886 Q5VSD8 79 aa10.5□□□□□ -0.73
SMG9-208ENST00000598886 C9orf62Q8N4C0 152 aa10.5□□□□□ -0.73
SMG9-208ENST00000598886 SLC25A29Q8N8R3 303 aa10.5□□□□□ -0.73
SMG9-208ENST00000598886 OR2G3Q8NGZ4 309 aa10.5□□□□□ -0.73
SMG9-208ENST00000598886 SDF2L1Q9HCN8 221 aa10.5□□□□□ -0.73
SMG9-208ENST00000598886 TCRAP04437 139 aa10.49□□□□□ -0.73
SMG9-208ENST00000598886 CFAP126Q5VTH2 177 aa10.49□□□□□ -0.73
SMG9-208ENST00000598886 SH2D6Q7Z4S9 175 aa10.49□□□□□ -0.73
SMG9-208ENST00000598886 C10orf126Q8N4M7 172 aa10.49□□□□□ -0.73
SMG9-208ENST00000598886 OR10G9Q8NGN4 311 aa10.49□□□□□ -0.73
SMG9-208ENST00000598886 OR10G7Q8NGN6 311 aa10.49□□□□□ -0.73
SMG9-208ENST00000598886 KCNS1Q96KK3 526 aa10.49□□□□□ -0.73
SMG9-208ENST00000598886 SGK494Q96LW2 274 aa10.49□□□□□ -0.73
SMG9-208ENST00000598886 IGHV3-38A0A0C4DH36 116 aa10.48□□□□□ -0.73
SMG9-208ENST00000598886 A0A1W2PPV4 95 aa10.48□□□□□ -0.73
SMG9-208ENST00000598886 IBA57-AS1B1ANH7 110 aa10.48□□□□□ -0.73
SMG9-208ENST00000598886 GGTLC3B5MD39 225 aa10.48□□□□□ -0.73
SMG9-208ENST00000598886 TMEM75Q8N9X5 138 aa10.48□□□□□ -0.73
SMG9-208ENST00000598886 PTH2Q96A98 100 aa10.48□□□□□ -0.73
SMG9-208ENST00000598886 SERTM2A0A1B0GWG4 89 aa10.47□□□□□ -0.73
SMG9-208ENST00000598886 TRBV6-4A0A1B0GX49 114 aa10.47□□□□□ -0.73
SMG9-208ENST00000598886 FBLL1A6NHQ2 334 aaKnown RBP10.47□□□□□ -0.73
SMG9-208ENST00000598886 INAFM2P0DMQ5 153 aa10.47□□□□□ -0.73
SMG9-208ENST00000598886 LINC00694P0DN24 101 aa10.47□□□□□ -0.73
SMG9-208ENST00000598886 RNASE3P12724 160 aaKnown RBP10.47□□□□□ -0.73
SMG9-208ENST00000598886 GCSHP23434 173 aa10.47□□□□□ -0.73
SMG9-208ENST00000598886 CDC34P49427 236 aaPredicted RBP10.47□□□□□ -0.73
SMG9-208ENST00000598886 ZNF876PQ49A33 203 aa10.47□□□□□ -0.73
SMG9-208ENST00000598886 C5orf17Q8NAS9 161 aa10.47□□□□□ -0.73
SMG9-208ENST00000598886 PSMG3Q9BT73 122 aaPredicted RBP10.47□□□□□ -0.73
SMG9-208ENST00000598886 FLG2Q5D862 2391 aaPredicted RBP10.47□□□□□ -0.73
SMG9-208ENST00000598886 FXYD6-FXYD2A0A087WZ82 144 aa10.46□□□□□ -0.73
SMG9-208ENST00000598886 PGPEP1LA6NFU8 196 aa10.46□□□□□ -0.73
SMG9-208ENST00000598886 GCHFRP30047 84 aa10.46□□□□□ -0.73
SMG9-208ENST00000598886 ZNF345Q14585 488 aa10.46□□□□□ -0.73
SMG9-208ENST00000598886 ZNF506Q5JVG8 444 aa10.46□□□□□ -0.73
SMG9-208ENST00000598886 NHLRC2Q8NBF2 726 aa10.46□□□□□ -0.73
SMG9-208ENST00000598886 RAB24Q969Q5 203 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms