RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 GAGE12IP0CL82 117 aa13.95□□□□□ -0.18
SHKBP1-214ENST00000597396 BCL2P10415 239 aa13.95□□□□□ -0.18
SHKBP1-214ENST00000597396 TDRG1Q3Y452 100 aa13.95□□□□□ -0.18
SHKBP1-214ENST00000597396 SDF2L1Q9HCN8 221 aa13.95□□□□□ -0.18
SHKBP1-214ENST00000597396 LTAP01374 205 aa13.94□□□□□ -0.18
SHKBP1-214ENST00000597396 ATP5G1P05496 136 aa13.94□□□□□ -0.18
SHKBP1-214ENST00000597396 TAGLN2P37802 199 aaKnown RBP13.94□□□□□ -0.18
SHKBP1-214ENST00000597396 MEF2BQ02080 365 aaPredicted RBP13.94□□□□□ -0.18
SHKBP1-214ENST00000597396 VAX2Q9UIW0 290 aa13.94□□□□□ -0.18
SHKBP1-214ENST00000597396 TRGV1A0A0A0MS02 117 aa13.93□□□□□ -0.18
SHKBP1-214ENST00000597396 FABP5P3A8MUU1 101 aa13.93□□□□□ -0.18
SHKBP1-214ENST00000597396 Q6ZTI0 123 aa13.93□□□□□ -0.18
SHKBP1-214ENST00000597396 C11orf52Q96A22 123 aa13.93□□□□□ -0.18
SHKBP1-214ENST00000597396 ZC2HC1AQ96GY0 325 aa13.93□□□□□ -0.18
SHKBP1-214ENST00000597396 MDFICQ9P1T7 246 aa13.93□□□□□ -0.18
SHKBP1-214ENST00000597396 IGHV4-4A0A075B6R2 117 aa13.92□□□□□ -0.18
SHKBP1-214ENST00000597396 GNRH2O43555 120 aa13.92□□□□□ -0.18
SHKBP1-214ENST00000597396 PDE6DO43924 150 aa13.92□□□□□ -0.18
SHKBP1-214ENST00000597396 TYMSP04818 313 aa13.92□□□□□ -0.18
SHKBP1-214ENST00000597396 TCTAP57738 103 aa13.92□□□□□ -0.18
SHKBP1-214ENST00000597396 LINC00612Q8N6U2 182 aa13.92□□□□□ -0.18
SHKBP1-214ENST00000597396 C11orf21Q9P2W6 132 aa13.92□□□□□ -0.18
SHKBP1-214ENST00000597396 SPINK4O60575 86 aa13.91□□□□□ -0.18
SHKBP1-214ENST00000597396 BAGE2Q86Y30 109 aa13.91□□□□□ -0.18
SHKBP1-214ENST00000597396 NHLRC2Q8NBF2 726 aa13.91□□□□□ -0.18
SHKBP1-214ENST00000597396 SPXQ9BT56 116 aa13.91□□□□□ -0.18
SHKBP1-214ENST00000597396 TRGV2A0A075B6R0 118 aa13.9□□□□□ -0.18
SHKBP1-214ENST00000597396 IGHV3-16A0A0C4DH30 117 aa13.9□□□□□ -0.18
SHKBP1-214ENST00000597396 F5H768 121 aa13.9□□□□□ -0.18
SHKBP1-214ENST00000597396 RPL35P42766 123 aaKnown RBP13.9□□□□□ -0.18
SHKBP1-214ENST00000597396 FAM162BQ5T6X4 162 aa13.9□□□□□ -0.18
SHKBP1-214ENST00000597396 COX8CQ7Z4L0 72 aa13.9□□□□□ -0.18
SHKBP1-214ENST00000597396 LYPD6BQ8NI32 183 aa13.9□□□□□ -0.18
SHKBP1-214ENST00000597396 MED9Q9NWA0 146 aa13.9□□□□□ -0.18
SHKBP1-214ENST00000597396 MRPL16Q9NX20 251 aaKnown RBP13.9□□□□□ -0.18
SHKBP1-214ENST00000597396 MUC4Q99102 2169 aa13.89□□□□□ -0.19
SHKBP1-214ENST00000597396 SH2D1AO60880 128 aa13.89□□□□□ -0.19
SHKBP1-214ENST00000597396 LGALS9BQ3B8N2 356 aa13.89□□□□□ -0.19
SHKBP1-214ENST00000597396 TEX261Q6UWH6 196 aa13.89□□□□□ -0.19
SHKBP1-214ENST00000597396 FAM210BQ96KR6 192 aa13.89□□□□□ -0.19
SHKBP1-214ENST00000597396 NDUFAF3Q9BU61 184 aa13.89□□□□□ -0.19
SHKBP1-214ENST00000597396 DERL1Q9BUN8 251 aa13.89□□□□□ -0.19
SHKBP1-214ENST00000597396 ORM1P02763 201 aa13.88□□□□□ -0.19
SHKBP1-214ENST00000597396 CRIP1P50238 77 aa13.88□□□□□ -0.19
SHKBP1-214ENST00000597396 APLNQ9ULZ1 77 aa13.88□□□□□ -0.19
SHKBP1-214ENST00000597396 DNAH1Q9P2D7 4330 aa13.87□□□□□ -0.19
SHKBP1-214ENST00000597396 RBFOX3A6NFN3 312 aa13.87□□□□□ -0.19
SHKBP1-214ENST00000597396 ZNF674Q2M3X9 581 aa13.87□□□□□ -0.19
SHKBP1-214ENST00000597396 TMEM88Q6PEY1 159 aa13.87□□□□□ -0.19
SHKBP1-214ENST00000597396 LYSTQ99698 3801 aa13.87□□□□□ -0.19
SHKBP1-214ENST00000597396 IGKV3D-20A0A0C4DH25 116 aa13.86□□□□□ -0.19
SHKBP1-214ENST00000597396 B4DEV8 164 aa13.86□□□□□ -0.19
SHKBP1-214ENST00000597396 M0R036 132 aa13.86□□□□□ -0.19
SHKBP1-214ENST00000597396 M0R2P5 195 aa13.86□□□□□ -0.19
SHKBP1-214ENST00000597396 CENPWQ5EE01 88 aa13.86□□□□□ -0.19
SHKBP1-214ENST00000597396 S100A4P26447 101 aaKnown RBP13.85□□□□□ -0.19
SHKBP1-214ENST00000597396 OR5I1Q13606 314 aa13.85□□□□□ -0.19
SHKBP1-214ENST00000597396 TOR2AQ5JU69 321 aa13.85□□□□□ -0.19
SHKBP1-214ENST00000597396 ZNF506Q5JVG8 444 aa13.85□□□□□ -0.19
SHKBP1-214ENST00000597396 PRR27Q6MZM9 219 aa13.85□□□□□ -0.19
SHKBP1-214ENST00000597396 LINC00476Q8WZB0 136 aa13.85□□□□□ -0.19
SHKBP1-214ENST00000597396 C18orf15Q96N68 181 aa13.85□□□□□ -0.19
SHKBP1-214ENST00000597396 MLST8Q9BVC4 326 aa13.85□□□□□ -0.19
SHKBP1-214ENST00000597396 NACAE9PAV3 2078 aa13.84□□□□□ -0.19
SHKBP1-214ENST00000597396 RAB19A4D1S5 217 aa13.84□□□□□ -0.19
SHKBP1-214ENST00000597396 LY6G6CO95867 125 aa13.84□□□□□ -0.19
SHKBP1-214ENST00000597396 ASIPP42127 132 aa13.84□□□□□ -0.19
SHKBP1-214ENST00000597396 GNG4P50150 75 aa13.84□□□□□ -0.19
SHKBP1-214ENST00000597396 PCNPQ8WW12 178 aaKnown RBP13.84□□□□□ -0.19
SHKBP1-214ENST00000597396 EIF5A2Q9GZV4 153 aaKnown RBP13.84□□□□□ -0.19
SHKBP1-214ENST00000597396 PLECQ15149 4684 aaKnown RBP13.83□□□□□ -0.2
SHKBP1-214ENST00000597396 KRBOX1C9JBD0 128 aa13.83□□□□□ -0.2
SHKBP1-214ENST00000597396 IGHV3-53P01767 116 aa13.83□□□□□ -0.2
SHKBP1-214ENST00000597396 MGST1P10620 155 aaKnown RBP13.83□□□□□ -0.2
SHKBP1-214ENST00000597396 RASL10AQ92737 203 aa13.83□□□□□ -0.2
SHKBP1-214ENST00000597396 C9orf85Q96MD7 179 aa13.83□□□□□ -0.2
SHKBP1-214ENST00000597396 ALMS1Q8TCU4 4167 aa13.82□□□□□ -0.2
SHKBP1-214ENST00000597396 TMSB15BA0A087X1C1 80 aa13.82□□□□□ -0.2
SHKBP1-214ENST00000597396 LINC01559Q495D7 138 aa13.82□□□□□ -0.2
SHKBP1-214ENST00000597396 C15orf53Q8NAA6 179 aa13.82□□□□□ -0.2
SHKBP1-214ENST00000597396 FAM210AQ96ND0 272 aa13.82□□□□□ -0.2
SHKBP1-214ENST00000597396 GRIFINA4D1Z8 144 aa13.81□□□□□ -0.2
SHKBP1-214ENST00000597396 C9JCJ5 164 aa13.81□□□□□ -0.2
SHKBP1-214ENST00000597396 TMEM250H0YL14 139 aa13.81□□□□□ -0.2
SHKBP1-214ENST00000597396 RNASE3P12724 160 aaKnown RBP13.81□□□□□ -0.2
SHKBP1-214ENST00000597396 HOXA5P20719 270 aa13.81□□□□□ -0.2
SHKBP1-214ENST00000597396 LGALS9CQ6DKI2 356 aa13.81□□□□□ -0.2
SHKBP1-214ENST00000597396 SMIM12Q96EX1 92 aa13.81□□□□□ -0.2
SHKBP1-214ENST00000597396 TRAV26-1A0A087WT03 109 aa13.8□□□□□ -0.2
SHKBP1-214ENST00000597396 H3BVH4 76 aa13.8□□□□□ -0.2
SHKBP1-214ENST00000597396 CEBPGP53567 150 aa13.8□□□□□ -0.2
SHKBP1-214ENST00000597396 ZNF876PQ49A33 203 aa13.8□□□□□ -0.2
SHKBP1-214ENST00000597396 EPPK1P58107 5090 aaKnown RBP13.8□□□□□ -0.2
SHKBP1-214ENST00000597396 A0A0J9YY99 117 aa13.79□□□□□ -0.2
SHKBP1-214ENST00000597396 NUDT3O95989 172 aa13.79□□□□□ -0.2
SHKBP1-214ENST00000597396 IGLV2-8P01709 118 aa13.79□□□□□ -0.2
SHKBP1-214ENST00000597396 DNLZQ5SXM8 178 aa13.79□□□□□ -0.2
SHKBP1-214ENST00000597396 OR4C5Q8NGB2 326 aa13.79□□□□□ -0.2
SHKBP1-214ENST00000597396 DAZAP1Q96EP5 407 aaKnown RBP13.79□□□□□ -0.2
SHKBP1-214ENST00000597396 PARLQ9H300 379 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms