RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 TRGV2A0A075B6R0 118 aa7.84□□□□□ -1.15
LIG1-211ENST00000596457 SCO2A0A1W2PP80 73 aa7.84□□□□□ -1.15
LIG1-211ENST00000596457 FBLL1A6NHQ2 334 aaKnown RBP7.84□□□□□ -1.15
LIG1-211ENST00000596457 TCL1AP56279 114 aa7.84□□□□□ -1.15
LIG1-211ENST00000596457 OR5I1Q13606 314 aa7.84□□□□□ -1.15
LIG1-211ENST00000596457 Q86TA4 180 aa7.84□□□□□ -1.15
LIG1-211ENST00000596457 FMC1Q96HJ9 113 aa7.84□□□□□ -1.15
LIG1-211ENST00000596457 NDUFAF3Q9BU61 184 aa7.84□□□□□ -1.15
LIG1-211ENST00000596457 SDF2L1Q9HCN8 221 aa7.84□□□□□ -1.15
LIG1-211ENST00000596457 MRPL16Q9NX20 251 aaKnown RBP7.84□□□□□ -1.15
LIG1-211ENST00000596457 MDFICQ9P1T7 246 aa7.84□□□□□ -1.15
LIG1-211ENST00000596457 TYMSP04818 313 aa7.83□□□□□ -1.16
LIG1-211ENST00000596457 TCTAP57738 103 aa7.83□□□□□ -1.16
LIG1-211ENST00000596457 DAZ2Q13117 558 aaKnown RBP7.83□□□□□ -1.16
LIG1-211ENST00000596457 IBA57Q5T440 356 aaKnown RBP7.83□□□□□ -1.16
LIG1-211ENST00000596457 TMEM88Q6PEY1 159 aa7.83□□□□□ -1.16
LIG1-211ENST00000596457 LINC00476Q8WZB0 136 aa7.83□□□□□ -1.16
LIG1-211ENST00000596457 MANBALQ9NQG1 85 aa7.83□□□□□ -1.16
LIG1-211ENST00000596457 TRAV1-1A0A0B4J248 108 aa7.82□□□□□ -1.16
LIG1-211ENST00000596457 SPINK4O60575 86 aa7.82□□□□□ -1.16
LIG1-211ENST00000596457 IFNA1P01562 189 aa7.82□□□□□ -1.16
LIG1-211ENST00000596457 IGHV3-53P01767 116 aa7.82□□□□□ -1.16
LIG1-211ENST00000596457 PFN1P07737 140 aaKnown RBP7.82□□□□□ -1.16
LIG1-211ENST00000596457 NHLRC2Q8NBF2 726 aa7.82□□□□□ -1.16
LIG1-211ENST00000596457 KCNS1Q96KK3 526 aa7.82□□□□□ -1.16
LIG1-211ENST00000596457 TCEAL7Q9BRU2 100 aa7.82□□□□□ -1.16
LIG1-211ENST00000596457 C11orf21Q9P2W6 132 aa7.82□□□□□ -1.16
LIG1-211ENST00000596457 A0A0J9YY99 117 aa7.81□□□□□ -1.16
LIG1-211ENST00000596457 FABP5P3A8MUU1 101 aa7.81□□□□□ -1.16
LIG1-211ENST00000596457 NUDT3O95989 172 aa7.81□□□□□ -1.16
LIG1-211ENST00000596457 ORM1P02763 201 aa7.81□□□□□ -1.16
LIG1-211ENST00000596457 BLOC1S1P78537 153 aa7.81□□□□□ -1.16
LIG1-211ENST00000596457 LINC00612Q8N6U2 182 aa7.81□□□□□ -1.16
LIG1-211ENST00000596457 ZC2HC1AQ96GY0 325 aa7.81□□□□□ -1.16
LIG1-211ENST00000596457 SPXQ9BT56 116 aa7.81□□□□□ -1.16
LIG1-211ENST00000596457 ZFP30Q9Y2G7 519 aa7.81□□□□□ -1.16
LIG1-211ENST00000596457 IGHV3-16A0A0C4DH30 117 aa7.8□□□□□ -1.16
LIG1-211ENST00000596457 C9JCJ5 164 aa7.8□□□□□ -1.16
LIG1-211ENST00000596457 S100A9P06702 114 aaKnown RBP7.8□□□□□ -1.16
LIG1-211ENST00000596457 HOXA5P20719 270 aa7.8□□□□□ -1.16
LIG1-211ENST00000596457 TDRG1Q3Y452 100 aa7.8□□□□□ -1.16
LIG1-211ENST00000596457 LGALS9CQ6DKI2 356 aa7.8□□□□□ -1.16
LIG1-211ENST00000596457 BAGE2Q86Y30 109 aa7.8□□□□□ -1.16
LIG1-211ENST00000596457 UBE2DNLQ8IWF7 75 aa7.8□□□□□ -1.16
LIG1-211ENST00000596457 TMSB15BA0A087X1C1 80 aa7.79□□□□□ -1.16
LIG1-211ENST00000596457 TRBV6-1A0A0K0K1D8 114 aa7.79□□□□□ -1.16
LIG1-211ENST00000596457 B4DEV8 164 aa7.79□□□□□ -1.16
LIG1-211ENST00000596457 M0R036 132 aa7.79□□□□□ -1.16
LIG1-211ENST00000596457 SH2D1AO60880 128 aa7.79□□□□□ -1.16
LIG1-211ENST00000596457 LTAP01374 205 aa7.79□□□□□ -1.16
LIG1-211ENST00000596457 S100A4P26447 101 aaKnown RBP7.79□□□□□ -1.16
LIG1-211ENST00000596457 CRIP1P50238 77 aa7.79□□□□□ -1.16
LIG1-211ENST00000596457 LGALS9BQ3B8N2 356 aa7.79□□□□□ -1.16
LIG1-211ENST00000596457 FAM210BQ96KR6 192 aa7.79□□□□□ -1.16
LIG1-211ENST00000596457 DERL1Q9BUN8 251 aa7.79□□□□□ -1.16
LIG1-211ENST00000596457 TRAV26-1A0A087WT03 109 aa7.78□□□□□ -1.16
LIG1-211ENST00000596457 IGKV3D-20A0A0C4DH25 116 aa7.78□□□□□ -1.16
LIG1-211ENST00000596457 GRIFINA4D1Z8 144 aa7.78□□□□□ -1.16
LIG1-211ENST00000596457 M0R2P5 195 aa7.78□□□□□ -1.16
LIG1-211ENST00000596457 SFTA3P0C7M3 94 aa7.78□□□□□ -1.16
LIG1-211ENST00000596457 BCL2P10415 239 aa7.78□□□□□ -1.16
LIG1-211ENST00000596457 RPL35P42766 123 aaKnown RBP7.78□□□□□ -1.16
LIG1-211ENST00000596457 MEF2BQ02080 365 aaPredicted RBP7.78□□□□□ -1.16
LIG1-211ENST00000596457 FAM162BQ5T6X4 162 aa7.78□□□□□ -1.16
LIG1-211ENST00000596457 PRR27Q6MZM9 219 aa7.78□□□□□ -1.16
LIG1-211ENST00000596457 C15orf53Q8NAA6 179 aa7.78□□□□□ -1.16
LIG1-211ENST00000596457 TXNDC17Q9BRA2 123 aa7.78□□□□□ -1.16
LIG1-211ENST00000596457 MED9Q9NWA0 146 aa7.78□□□□□ -1.16
LIG1-211ENST00000596457 VAX2Q9UIW0 290 aa7.78□□□□□ -1.16
LIG1-211ENST00000596457 TRGV4A0A0C4DH28 118 aa7.77□□□□□ -1.17
LIG1-211ENST00000596457 RAB19A4D1S5 217 aa7.77□□□□□ -1.17
LIG1-211ENST00000596457 P0DMU3 169 aa7.77□□□□□ -1.17
LIG1-211ENST00000596457 FAM231AP0DMU4 169 aa7.77□□□□□ -1.17
LIG1-211ENST00000596457 FAM231CP0DMU5 169 aa7.77□□□□□ -1.17
LIG1-211ENST00000596457 MGST1P10620 155 aaKnown RBP7.77□□□□□ -1.17
LIG1-211ENST00000596457 ASIPP42127 132 aa7.77□□□□□ -1.17
LIG1-211ENST00000596457 PCNPQ8WW12 178 aaKnown RBP7.77□□□□□ -1.17
LIG1-211ENST00000596457 RBFOX3A6NFN3 312 aa7.76□□□□□ -1.17
LIG1-211ENST00000596457 PGPEP1LA6NFU8 196 aa7.76□□□□□ -1.17
LIG1-211ENST00000596457 KRBOX1C9JBD0 128 aa7.76□□□□□ -1.17
LIG1-211ENST00000596457 PDE6DO43924 150 aa7.76□□□□□ -1.17
LIG1-211ENST00000596457 CEBPGP53567 150 aa7.76□□□□□ -1.17
LIG1-211ENST00000596457 ZNF674Q2M3X9 581 aa7.76□□□□□ -1.17
LIG1-211ENST00000596457 ZNF876PQ49A33 203 aa7.76□□□□□ -1.17
LIG1-211ENST00000596457 OR4C5Q8NGB2 326 aa7.76□□□□□ -1.17
LIG1-211ENST00000596457 RASL10AQ92737 203 aa7.76□□□□□ -1.17
LIG1-211ENST00000596457 C11orf52Q96A22 123 aa7.76□□□□□ -1.17
LIG1-211ENST00000596457 ZNF479Q96JC4 524 aa7.76□□□□□ -1.17
LIG1-211ENST00000596457 H3BVH4 76 aa7.75□□□□□ -1.17
LIG1-211ENST00000596457 PAX4O43316 350 aa7.75□□□□□ -1.17
LIG1-211ENST00000596457 RNASE3P12724 160 aaKnown RBP7.75□□□□□ -1.17
LIG1-211ENST00000596457 GNG4P50150 75 aa7.75□□□□□ -1.17
LIG1-211ENST00000596457 RPL19P84098 196 aaKnown RBP7.75□□□□□ -1.17
LIG1-211ENST00000596457 CENPWQ5EE01 88 aa7.75□□□□□ -1.17
LIG1-211ENST00000596457 COX8CQ7Z4L0 72 aa7.75□□□□□ -1.17
LIG1-211ENST00000596457 POM121L12Q8N7R1 296 aa7.75□□□□□ -1.17
LIG1-211ENST00000596457 C9orf85Q96MD7 179 aa7.75□□□□□ -1.17
LIG1-211ENST00000596457 EIF5A2Q9GZV4 153 aaKnown RBP7.75□□□□□ -1.17
LIG1-211ENST00000596457 PLECQ15149 4684 aaKnown RBP7.75□□□□□ -1.17
LIG1-211ENST00000596457 ALMS1Q8TCU4 4167 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms