RNA–Protein interactions for RNA: ENST00000595993.5

USHBP1-205, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-205ENST00000595993 PRNTQ86SH4 94 aa11.2□□□□□ -0.62
USHBP1-205ENST00000595993 GSN-AS1Q9NRJ2 163 aa11.2□□□□□ -0.62
USHBP1-205ENST00000595993 IGLV2-18A0A075B6J9 118 aa11.19□□□□□ -0.62
USHBP1-205ENST00000595993 HTN3P15516 51 aa11.19□□□□□ -0.62
USHBP1-205ENST00000595993 RAB5CP51148 216 aa11.19□□□□□ -0.62
USHBP1-205ENST00000595993 ZNF80P51504 273 aaPredicted RBP11.19□□□□□ -0.62
USHBP1-205ENST00000595993 CST9LP1Q5W188 147 aa11.19□□□□□ -0.62
USHBP1-205ENST00000595993 ZNF575Q86XF7 245 aa11.19□□□□□ -0.62
USHBP1-205ENST00000595993 NKX6-2Q9C056 277 aaPredicted RBP11.19□□□□□ -0.62
USHBP1-205ENST00000595993 BOLA1Q9Y3E2 137 aa11.19□□□□□ -0.62
USHBP1-205ENST00000595993 ARL2-SNX15V9GYD0 113 aa11.19□□□□□ -0.62
USHBP1-205ENST00000595993 SNURFLB1AK76 121 aa11.18□□□□□ -0.62
USHBP1-205ENST00000595993 Q86TA4 180 aa11.18□□□□□ -0.62
USHBP1-205ENST00000595993 LINC00612Q8N6U2 182 aa11.18□□□□□ -0.62
USHBP1-205ENST00000595993 ZNF680Q8NEM1 530 aa11.18□□□□□ -0.62
USHBP1-205ENST00000595993 NDFIP1Q9BT67 221 aa11.18□□□□□ -0.62
USHBP1-205ENST00000595993 KLF12Q9Y4X4 402 aa11.18□□□□□ -0.62
USHBP1-205ENST00000595993 TRAV1-1A0A0B4J248 108 aa11.17□□□□□ -0.62
USHBP1-205ENST00000595993 TCL1AP56279 114 aa11.17□□□□□ -0.62
USHBP1-205ENST00000595993 DAZ2Q13117 558 aaKnown RBP11.17□□□□□ -0.62
USHBP1-205ENST00000595993 SOHLH1Q5JUK2 328 aa11.17□□□□□ -0.62
USHBP1-205ENST00000595993 IBA57Q5T440 356 aaKnown RBP11.17□□□□□ -0.62
USHBP1-205ENST00000595993 UBE2DNLQ8IWF7 75 aa11.17□□□□□ -0.62
USHBP1-205ENST00000595993 HIST1H2BAQ96A08 127 aa11.17□□□□□ -0.62
USHBP1-205ENST00000595993 NAGKQ9UJ70 344 aa11.17□□□□□ -0.62
USHBP1-205ENST00000595993 APOBP04114 4563 aaKnown RBP11.17□□□□□ -0.62
USHBP1-205ENST00000595993 TRAV21A0A0B4J279 112 aa11.16□□□□□ -0.62
USHBP1-205ENST00000595993 GAGE12BA1L429 117 aa11.16□□□□□ -0.62
USHBP1-205ENST00000595993 FBLL1A6NHQ2 334 aaKnown RBP11.16□□□□□ -0.62
USHBP1-205ENST00000595993 GAGE7O76087 117 aa11.16□□□□□ -0.62
USHBP1-205ENST00000595993 GAGE12FP0CL80 117 aa11.16□□□□□ -0.62
USHBP1-205ENST00000595993 GAGE12GP0CL81 117 aa11.16□□□□□ -0.62
USHBP1-205ENST00000595993 GAGE12IP0CL82 117 aa11.16□□□□□ -0.62
USHBP1-205ENST00000595993 ALKAL2Q6UX46 152 aa11.16□□□□□ -0.62
USHBP1-205ENST00000595993 Q6ZTI0 123 aa11.16□□□□□ -0.62
USHBP1-205ENST00000595993 C11orf21Q9P2W6 132 aa11.16□□□□□ -0.62
USHBP1-205ENST00000595993 GCGP01275 180 aa11.15□□□□□ -0.62
USHBP1-205ENST00000595993 FAM3BP58499 235 aaPredicted RBP11.15□□□□□ -0.62
USHBP1-205ENST00000595993 TMEM183BQ1AE95 376 aa11.15□□□□□ -0.62
USHBP1-205ENST00000595993 TDRG1Q3Y452 100 aa11.15□□□□□ -0.62
USHBP1-205ENST00000595993 C1orf134Q5TEV5 83 aa11.15□□□□□ -0.62
USHBP1-205ENST00000595993 FAM159AQ6UWV7 190 aa11.15□□□□□ -0.62
USHBP1-205ENST00000595993 TMEM183AQ8IXX5 376 aa11.15□□□□□ -0.62
USHBP1-205ENST00000595993 TCEAL7Q9BRU2 100 aa11.15□□□□□ -0.62
USHBP1-205ENST00000595993 MDFICQ9P1T7 246 aa11.15□□□□□ -0.62
USHBP1-205ENST00000595993 GNG13Q9P2W3 67 aa11.15□□□□□ -0.62
USHBP1-205ENST00000595993 DNAH5Q8TE73 4624 aa11.14□□□□□ -0.63
USHBP1-205ENST00000595993 SCO2A0A1W2PP80 73 aa11.14□□□□□ -0.63
USHBP1-205ENST00000595993 SPINK4O60575 86 aa11.14□□□□□ -0.63
USHBP1-205ENST00000595993 PPT1P50897 306 aa11.14□□□□□ -0.63
USHBP1-205ENST00000595993 ZNF415Q09FC8 603 aa11.14□□□□□ -0.63
USHBP1-205ENST00000595993 SMUG1Q53HV7 270 aa11.14□□□□□ -0.63
USHBP1-205ENST00000595993 SAPCD1Q5SSQ6 148 aa11.14□□□□□ -0.63
USHBP1-205ENST00000595993 TMEM88Q6PEY1 159 aa11.14□□□□□ -0.63
USHBP1-205ENST00000595993 TRBV6-1A0A0K0K1D8 114 aa11.13□□□□□ -0.63
USHBP1-205ENST00000595993 GNRH2O43555 120 aa11.13□□□□□ -0.63
USHBP1-205ENST00000595993 CDK2AP2O75956 126 aa11.13□□□□□ -0.63
USHBP1-205ENST00000595993 TYMSP04818 313 aa11.13□□□□□ -0.63
USHBP1-205ENST00000595993 ATP5G1P05496 136 aa11.13□□□□□ -0.63
USHBP1-205ENST00000595993 PFN1P07737 140 aaKnown RBP11.13□□□□□ -0.63
USHBP1-205ENST00000595993 AKR1C3P42330 323 aa11.13□□□□□ -0.63
USHBP1-205ENST00000595993 FMC1Q96HJ9 113 aa11.13□□□□□ -0.63
USHBP1-205ENST00000595993 MANBALQ9NQG1 85 aa11.13□□□□□ -0.63
USHBP1-205ENST00000595993 MRPL16Q9NX20 251 aaKnown RBP11.13□□□□□ -0.63
USHBP1-205ENST00000595993 TRGV11A0A075B6L2 103 aa11.12□□□□□ -0.63
USHBP1-205ENST00000595993 TRGV1A0A0A0MS02 117 aa11.12□□□□□ -0.63
USHBP1-205ENST00000595993 IGHV3-16A0A0C4DH30 117 aa11.12□□□□□ -0.63
USHBP1-205ENST00000595993 F5H768 121 aa11.12□□□□□ -0.63
USHBP1-205ENST00000595993 UBE2G1P62253 170 aa11.12□□□□□ -0.63
USHBP1-205ENST00000595993 C15orf53Q8NAA6 179 aa11.12□□□□□ -0.63
USHBP1-205ENST00000595993 ZC2HC1AQ96GY0 325 aa11.12□□□□□ -0.63
USHBP1-205ENST00000595993 LTAP01374 205 aa11.11□□□□□ -0.63
USHBP1-205ENST00000595993 HOXA5P20719 270 aa11.11□□□□□ -0.63
USHBP1-205ENST00000595993 CRIP1P50238 77 aa11.11□□□□□ -0.63
USHBP1-205ENST00000595993 TEX46H3BTG2 121 aa11.1□□□□□ -0.63
USHBP1-205ENST00000595993 TNP2Q05952 138 aa11.1□□□□□ -0.63
USHBP1-205ENST00000595993 COX8CQ7Z4L0 72 aa11.1□□□□□ -0.63
USHBP1-205ENST00000595993 C18orf15Q96N68 181 aa11.1□□□□□ -0.63
USHBP1-205ENST00000595993 SDF2L1Q9HCN8 221 aa11.1□□□□□ -0.63
USHBP1-205ENST00000595993 ZFP30Q9Y2G7 519 aa11.1□□□□□ -0.63
USHBP1-205ENST00000595993 NHLRC2Q8NBF2 726 aa11.09□□□□□ -0.63
USHBP1-205ENST00000595993 ZNRF2Q8NHG8 242 aa11.09□□□□□ -0.63
USHBP1-205ENST00000595993 C11orf52Q96A22 123 aa11.09□□□□□ -0.63
USHBP1-205ENST00000595993 KCNS1Q96KK3 526 aa11.09□□□□□ -0.63
USHBP1-205ENST00000595993 TRGV2A0A075B6R0 118 aa11.08□□□□□ -0.64
USHBP1-205ENST00000595993 IGKV3D-20A0A0C4DH25 116 aa11.08□□□□□ -0.64
USHBP1-205ENST00000595993 BCL2P10415 239 aa11.08□□□□□ -0.64
USHBP1-205ENST00000595993 DERL1Q9BUN8 251 aa11.08□□□□□ -0.64
USHBP1-205ENST00000595993 NBDYA0A0U1RRE5 68 aa11.07□□□□□ -0.64
USHBP1-205ENST00000595993 FABP5P3A8MUU1 101 aa11.07□□□□□ -0.64
USHBP1-205ENST00000595993 SH2D1AO60880 128 aa11.07□□□□□ -0.64
USHBP1-205ENST00000595993 MEF2BQ02080 365 aaPredicted RBP11.07□□□□□ -0.64
USHBP1-205ENST00000595993 SPXQ9BT56 116 aa11.07□□□□□ -0.64
USHBP1-205ENST00000595993 C16orf90A8MZG2 172 aa11.06□□□□□ -0.64
USHBP1-205ENST00000595993 IFNA1P01562 189 aa11.06□□□□□ -0.64
USHBP1-205ENST00000595993 IGHV3-53P01767 116 aa11.06□□□□□ -0.64
USHBP1-205ENST00000595993 S100A9P06702 114 aaKnown RBP11.06□□□□□ -0.64
USHBP1-205ENST00000595993 RPL35P42766 123 aaKnown RBP11.06□□□□□ -0.64
USHBP1-205ENST00000595993 OR5I1Q13606 314 aa11.06□□□□□ -0.64
USHBP1-205ENST00000595993 ZNF674Q2M3X9 581 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms