RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 TRAV40A0A0B4J280 105 aa11.92□□□□□ -0.5
PNKP-204ENST00000594661 WI2-2373I1.2A0A1W2PRP0 233 aa11.92□□□□□ -0.5
PNKP-204ENST00000594661 GAGE12JA6NER3 117 aa11.92□□□□□ -0.5
PNKP-204ENST00000594661 K7EIM0 57 aa11.92□□□□□ -0.5
PNKP-204ENST00000594661 GAGE7O76087 117 aa11.92□□□□□ -0.5
PNKP-204ENST00000594661 SLC25A5P05141 298 aaKnown RBP11.92□□□□□ -0.5
PNKP-204ENST00000594661 GAGE12FP0CL80 117 aa11.92□□□□□ -0.5
PNKP-204ENST00000594661 GAGE12GP0CL81 117 aa11.92□□□□□ -0.5
PNKP-204ENST00000594661 GAGE12IP0CL82 117 aa11.92□□□□□ -0.5
PNKP-204ENST00000594661 GAGE4Q13068 117 aa11.92□□□□□ -0.5
PNKP-204ENST00000594661 BRD3OSQ6XYD6 125 aa11.92□□□□□ -0.5
PNKP-204ENST00000594661 GLMPQ8WWB7 406 aa11.92□□□□□ -0.5
PNKP-204ENST00000594661 PPDPFLQ8WWR9 84 aa11.92□□□□□ -0.5
PNKP-204ENST00000594661 HIGD1AQ9Y241 93 aa11.92□□□□□ -0.5
PNKP-204ENST00000594661 IGHV1-69DA0A0B4J2H0 117 aa11.91□□□□□ -0.5
PNKP-204ENST00000594661 IGHV1-69P01742 117 aa11.91□□□□□ -0.5
PNKP-204ENST00000594661 KRTAP10-9P60411 292 aa11.91□□□□□ -0.5
PNKP-204ENST00000594661 KLF17Q5JT82 389 aaPredicted RBP11.91□□□□□ -0.5
PNKP-204ENST00000594661 A0A087WX48 190 aa11.9□□□□□ -0.5
PNKP-204ENST00000594661 MSMBP08118 114 aa11.9□□□□□ -0.5
PNKP-204ENST00000594661 SGK494Q96LW2 274 aa11.9□□□□□ -0.5
PNKP-204ENST00000594661 SPANXA1Q9NS26 97 aa11.9□□□□□ -0.5
PNKP-204ENST00000594661 POLQO75417 2590 aa11.9□□□□□ -0.5
PNKP-204ENST00000594661 IGHV7-81A0A0B4J1V7 117 aa11.9□□□□□ -0.5
PNKP-204ENST00000594661 FABP5P3A8MUU1 101 aa11.9□□□□□ -0.5
PNKP-204ENST00000594661 RHODO00212 210 aa11.9□□□□□ -0.5
PNKP-204ENST00000594661 IGKV1-17P01599 117 aa11.9□□□□□ -0.5
PNKP-204ENST00000594661 ARMS2P0C7Q2 107 aa11.9□□□□□ -0.5
PNKP-204ENST00000594661 IGHV4-38-2P0DP08 117 aa11.9□□□□□ -0.5
PNKP-204ENST00000594661 GP9P14770 177 aa11.9□□□□□ -0.5
PNKP-204ENST00000594661 EVI2AP22794 236 aa11.9□□□□□ -0.5
PNKP-204ENST00000594661 DSCR9P59020 149 aa11.9□□□□□ -0.5
PNKP-204ENST00000594661 ZNF493Q6ZR52 646 aa11.9□□□□□ -0.5
PNKP-204ENST00000594661 TTTY13Q9BZ97 58 aa11.9□□□□□ -0.5
PNKP-204ENST00000594661 PGPA6NDG6 321 aa11.89□□□□□ -0.51
PNKP-204ENST00000594661 CARD19Q96LW7 228 aa11.89□□□□□ -0.51
PNKP-204ENST00000594661 CHD6Q8TD26 2715 aa11.89□□□□□ -0.51
PNKP-204ENST00000594661 ANKRD17O75179 2603 aaKnown RBP11.89□□□□□ -0.51
PNKP-204ENST00000594661 H3BTX0 84 aa11.89□□□□□ -0.51
PNKP-204ENST00000594661 EGR2P11161 476 aaPredicted RBP11.89□□□□□ -0.51
PNKP-204ENST00000594661 SLC25A39Q9BZJ4 359 aaPredicted RBP11.89□□□□□ -0.51
PNKP-204ENST00000594661 YAE1D1Q9NRH1 226 aa11.89□□□□□ -0.51
PNKP-204ENST00000594661 USP9YO00507 2555 aaPredicted RBP11.88□□□□□ -0.51
PNKP-204ENST00000594661 K7EMI3 77 aa11.88□□□□□ -0.51
PNKP-204ENST00000594661 TMEM158Q8WZ71 300 aa11.88□□□□□ -0.51
PNKP-204ENST00000594661 DLX4Q92988 240 aaPredicted RBP11.88□□□□□ -0.51
PNKP-204ENST00000594661 FANCD2OSQ96PS1 177 aa11.88□□□□□ -0.51
PNKP-204ENST00000594661 S4R3C0 116 aa11.88□□□□□ -0.51
PNKP-204ENST00000594661 KMT2BQ9UMN6 2715 aaPredicted RBP11.88□□□□□ -0.51
PNKP-204ENST00000594661 A0A096LNT2 108 aa11.87□□□□□ -0.51
PNKP-204ENST00000594661 SLC25A16P16260 332 aa11.87□□□□□ -0.51
PNKP-204ENST00000594661 NDUFV3P56181 108 aaKnown RBP11.87□□□□□ -0.51
PNKP-204ENST00000594661 TEN1Q86WV5 123 aa11.87□□□□□ -0.51
PNKP-204ENST00000594661 TENM4Q6N022 2769 aa11.87□□□□□ -0.51
PNKP-204ENST00000594661 IGLV11-55A0A075B6I3 123 aa11.87□□□□□ -0.51
PNKP-204ENST00000594661 LOC389332A0A1B0GUA5 103 aa11.87□□□□□ -0.51
PNKP-204ENST00000594661 TMEM262E9PQX1 116 aa11.87□□□□□ -0.51
PNKP-204ENST00000594661 LINC01619G3V211 115 aa11.87□□□□□ -0.51
PNKP-204ENST00000594661 PTPN13Q12923 2485 aa11.86□□□□□ -0.51
PNKP-204ENST00000594661 B4DSR2 109 aa11.86□□□□□ -0.51
PNKP-204ENST00000594661 CCDC179H3BU77 68 aa11.86□□□□□ -0.51
PNKP-204ENST00000594661 MORN3Q6PF18 240 aaPredicted RBP11.86□□□□□ -0.51
PNKP-204ENST00000594661 TMEM219Q86XT9 240 aa11.86□□□□□ -0.51
PNKP-204ENST00000594661 Q9H3A6 140 aa11.86□□□□□ -0.51
PNKP-204ENST00000594661 NBPF19A0A087WUL8 3843 aa11.86□□□□□ -0.51
PNKP-204ENST00000594661 D6R8Y8 96 aa11.86□□□□□ -0.51
PNKP-204ENST00000594661 AVPP01185 164 aa11.86□□□□□ -0.51
PNKP-204ENST00000594661 TCRAP04437 139 aa11.86□□□□□ -0.51
PNKP-204ENST00000594661 ZNF688P0C7X2 276 aa11.86□□□□□ -0.51
PNKP-204ENST00000594661 Q86TA4 180 aa11.86□□□□□ -0.51
PNKP-204ENST00000594661 TRBV7-3A0A075B6L6 115 aa11.85□□□□□ -0.51
PNKP-204ENST00000594661 TMEM14CQ9P0S9 112 aa11.85□□□□□ -0.51
PNKP-204ENST00000594661 ATP6V0E1O15342 81 aa11.84□□□□□ -0.51
PNKP-204ENST00000594661 IGKCP01834 107 aa11.84□□□□□ -0.51
PNKP-204ENST00000594661 IL4P05112 153 aa11.84□□□□□ -0.51
PNKP-204ENST00000594661 ORMDL3Q8N138 153 aa11.84□□□□□ -0.51
PNKP-204ENST00000594661 MAPK1IP1LQ8NDC0 245 aa11.84□□□□□ -0.51
PNKP-204ENST00000594661 RNF125Q96EQ8 232 aa11.84□□□□□ -0.51
PNKP-204ENST00000594661 LINC01548A6NM66 108 aa11.84□□□□□ -0.51
PNKP-204ENST00000594661 MFAP4P55083 255 aa11.84□□□□□ -0.51
PNKP-204ENST00000594661 C5orf56Q8N8D9 126 aa11.84□□□□□ -0.51
PNKP-204ENST00000594661 ZNF491Q8N8L2 437 aa11.84□□□□□ -0.51
PNKP-204ENST00000594661 SHANK2-AS3Q9BTD1 123 aa11.84□□□□□ -0.51
PNKP-204ENST00000594661 ABCA12Q86UK0 2595 aa11.84□□□□□ -0.51
PNKP-204ENST00000594661 TRBV6-1A0A0K0K1D8 114 aa11.83□□□□□ -0.52
PNKP-204ENST00000594661 LINC01546A6NGU7 62 aa11.83□□□□□ -0.52
PNKP-204ENST00000594661 ID1P41134 155 aa11.83□□□□□ -0.52
PNKP-204ENST00000594661 FXYD7P58549 80 aa11.83□□□□□ -0.52
PNKP-204ENST00000594661 ECSCRQ19T08 205 aa11.83□□□□□ -0.52
PNKP-204ENST00000594661 LINC01559Q495D7 138 aa11.83□□□□□ -0.52
PNKP-204ENST00000594661 SBSPONQ8IVN8 264 aa11.83□□□□□ -0.52
PNKP-204ENST00000594661 VPREB3Q9UKI3 123 aa11.83□□□□□ -0.52
PNKP-204ENST00000594661 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.83□□□□□ -0.528e-7■■■■□ 23.6
PNKP-204ENST00000594661 F8W735 103 aaPredicted RBP11.83□□□□□ -0.52
PNKP-204ENST00000594661 H3BRN7 92 aa11.83□□□□□ -0.52
PNKP-204ENST00000594661 FAM104BQ5XKR9 115 aa11.83□□□□□ -0.52
PNKP-204ENST00000594661 Q6Q795 121 aa11.83□□□□□ -0.52
PNKP-204ENST00000594661 CIARTQ8N365 385 aaPredicted RBP11.83□□□□□ -0.52
PNKP-204ENST00000594661 OTORQ9NRC9 128 aa11.83□□□□□ -0.52
PNKP-204ENST00000594661 ZNF785A8K8V0 405 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms