RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 INAFM2P0DMQ5 153 aa16.13■□□□□ 0.17
LSM4-202ENST00000593564 TIRAPP58753 221 aa16.13■□□□□ 0.17
LSM4-202ENST00000593564 FAM74A1Q5RGS3 127 aa16.13■□□□□ 0.17
LSM4-202ENST00000593564 Q5VSD8 79 aa16.13■□□□□ 0.17
LSM4-202ENST00000593564 RPH3ALQ9UNE2 315 aa16.13■□□□□ 0.17
LSM4-202ENST00000593564 EIF3GO75821 320 aaKnown RBP eCLIP16.12■□□□□ 0.17
LSM4-202ENST00000593564 MPC2O95563 127 aa16.12■□□□□ 0.17
LSM4-202ENST00000593564 GOLT1AQ6ZVE7 132 aa16.12■□□□□ 0.17
LSM4-202ENST00000593564 FRZBQ92765 325 aa16.12■□□□□ 0.17
LSM4-202ENST00000593564 SMIM3Q9BZL3 60 aa16.12■□□□□ 0.17
LSM4-202ENST00000593564 LOC100131303A0A0U1RQF7 123 aa16.11■□□□□ 0.17
LSM4-202ENST00000593564 TYMSP04818 313 aa16.11■□□□□ 0.17
LSM4-202ENST00000593564 GCSHP23434 173 aa16.11■□□□□ 0.17
LSM4-202ENST00000593564 RPL12P30050 165 aaKnown RBP16.11■□□□□ 0.17
LSM4-202ENST00000593564 PQLC2Q6ZP29 291 aa16.11■□□□□ 0.17
LSM4-202ENST00000593564 F6UZH7 168 aa16.1■□□□□ 0.17
LSM4-202ENST00000593564 GATA1P15976 413 aaPredicted RBP16.1■□□□□ 0.17
LSM4-202ENST00000593564 IFITM3Q01628 133 aa16.1■□□□□ 0.17
LSM4-202ENST00000593564 TVP23CQ96ET8 276 aa16.1■□□□□ 0.17
LSM4-202ENST00000593564 SDF2L1Q9HCN8 221 aa16.1■□□□□ 0.17
LSM4-202ENST00000593564 TREM1Q9NP99 234 aa16.1■□□□□ 0.17
LSM4-202ENST00000593564 MYCBP2O75592 4640 aa16.1■□□□□ 0.17
LSM4-202ENST00000593564 IGHV3-38A0A0C4DH36 116 aa16.09■□□□□ 0.17
LSM4-202ENST00000593564 ACOT6Q3I5F7 207 aaPredicted RBP16.09■□□□□ 0.17
LSM4-202ENST00000593564 NHLRC2Q8NBF2 726 aa16.09■□□□□ 0.17
LSM4-202ENST00000593564 KCNS1Q96KK3 526 aa16.09■□□□□ 0.17
LSM4-202ENST00000593564 MARVELD1Q9BSK0 173 aa16.09■□□□□ 0.17
LSM4-202ENST00000593564 TRAV8-1A0A0A6YYK1 113 aa16.08■□□□□ 0.16
LSM4-202ENST00000593564 A0A1W2PPV4 95 aa16.08■□□□□ 0.16
LSM4-202ENST00000593564 PPT1P50897 306 aa16.08■□□□□ 0.16
LSM4-202ENST00000593564 LINC01556Q5JQF7 62 aa16.08■□□□□ 0.16
LSM4-202ENST00000593564 WFDC1Q9HC57 220 aa16.08■□□□□ 0.16
LSM4-202ENST00000593564 SSNA1O43805 119 aa16.07■□□□□ 0.16
LSM4-202ENST00000593564 ASB13Q8WXK3 278 aa16.07■□□□□ 0.16
LSM4-202ENST00000593564 GNG5P63218 68 aa16.06■□□□□ 0.16
LSM4-202ENST00000593564 BOLA1Q9Y3E2 137 aa16.06■□□□□ 0.16
LSM4-202ENST00000593564 DNAH8Q96JB1 4490 aa16.06■□□□□ 0.16
LSM4-202ENST00000593564 LRCOL1A6NCL2 159 aa16.05■□□□□ 0.16
LSM4-202ENST00000593564 FBLL1A6NHQ2 334 aaKnown RBP16.05■□□□□ 0.16
LSM4-202ENST00000593564 PSCAO43653 123 aa16.05■□□□□ 0.16
LSM4-202ENST00000593564 PFN1P07737 140 aaKnown RBP16.05■□□□□ 0.16
LSM4-202ENST00000593564 RAB2AP61019 212 aa16.05■□□□□ 0.16
LSM4-202ENST00000593564 SLC25A29Q8N8R3 303 aa16.05■□□□□ 0.16
LSM4-202ENST00000593564 NTN5Q8WTR8 489 aaPredicted RBP16.05■□□□□ 0.16
LSM4-202ENST00000593564 IBA57-AS1B1ANH7 110 aa16.04■□□□□ 0.16
LSM4-202ENST00000593564 CIDEAO60543 219 aa16.04■□□□□ 0.16
LSM4-202ENST00000593564 SRRM2Q9UQ35 2752 aaKnown RBP16.03■□□□□ 0.16
LSM4-202ENST00000593564 IGLV5-52A0A0A0MRZ9 124 aa16.03■□□□□ 0.16
LSM4-202ENST00000593564 TRAV8-6A0A0B4J262 113 aa16.03■□□□□ 0.16
LSM4-202ENST00000593564 SERTM2A0A1B0GWG4 89 aa16.03■□□□□ 0.16
LSM4-202ENST00000593564 ZNF876PQ49A33 203 aa16.03■□□□□ 0.16
LSM4-202ENST00000593564 OR10G9Q8NGN4 311 aa16.03■□□□□ 0.16
LSM4-202ENST00000593564 OR10G7Q8NGN6 311 aa16.03■□□□□ 0.16
LSM4-202ENST00000593564 PRADC1Q9BSG0 188 aa16.03■□□□□ 0.16
LSM4-202ENST00000593564 NDFIP1Q9BT67 221 aa16.03■□□□□ 0.16
LSM4-202ENST00000593564 TRBV6-4A0A1B0GX49 114 aa16.02■□□□□ 0.16
LSM4-202ENST00000593564 HMGB3O15347 200 aaKnown RBP16.02■□□□□ 0.16
LSM4-202ENST00000593564 RS1O15537 224 aa16.02■□□□□ 0.16
LSM4-202ENST00000593564 SMR3BP02814 79 aaPredicted RBP16.02■□□□□ 0.16
LSM4-202ENST00000593564 RHOHQ15669 191 aa16.02■□□□□ 0.16
LSM4-202ENST00000593564 CFAP126Q5VTH2 177 aa16.02■□□□□ 0.16
LSM4-202ENST00000593564 TMEM70Q9BUB7 260 aa16.02■□□□□ 0.16
LSM4-202ENST00000593564 OR10J3Q5JRS4 329 aa16.01■□□□□ 0.15
LSM4-202ENST00000593564 SGK494Q96LW2 274 aa16.01■□□□□ 0.15
LSM4-202ENST00000593564 C11orf21Q9P2W6 132 aa16.01■□□□□ 0.15
LSM4-202ENST00000593564 FLG2Q5D862 2391 aaPredicted RBP16.01■□□□□ 0.15
LSM4-202ENST00000593564 ARL14EPLP0DKL9 152 aa16■□□□□ 0.15
LSM4-202ENST00000593564 ZNF80P51504 273 aaPredicted RBP16■□□□□ 0.15
LSM4-202ENST00000593564 DPPA3Q6W0C5 159 aa16■□□□□ 0.15
LSM4-202ENST00000593564 C5orf17Q8NAS9 161 aa16■□□□□ 0.15
LSM4-202ENST00000593564 TAAR5O14804 337 aa15.99■□□□□ 0.15
LSM4-202ENST00000593564 TCRAP04437 139 aa15.99■□□□□ 0.15
LSM4-202ENST00000593564 STAG3L2P0CL84 134 aa15.99■□□□□ 0.15
LSM4-202ENST00000593564 STAG3L3P0CL85 134 aa15.99■□□□□ 0.15
LSM4-202ENST00000593564 CDC34P49427 236 aaPredicted RBP15.99■□□□□ 0.15
LSM4-202ENST00000593564 LELP1Q5T871 98 aa15.99■□□□□ 0.15
LSM4-202ENST00000593564 Q8N814 137 aa15.99■□□□□ 0.15
LSM4-202ENST00000593564 C9orf85Q96MD7 179 aa15.99■□□□□ 0.15
LSM4-202ENST00000593564 FAM229AH3BQW9 127 aa15.98■□□□□ 0.15
LSM4-202ENST00000593564 HAMPP81172 84 aa15.98■□□□□ 0.15
LSM4-202ENST00000593564 OR2G3Q8NGZ4 309 aa15.98■□□□□ 0.15
LSM4-202ENST00000593564 SUN5Q8TC36 379 aa15.98■□□□□ 0.15
LSM4-202ENST00000593564 PTH2Q96A98 100 aa15.98■□□□□ 0.15
LSM4-202ENST00000593564 Q9HAA7 133 aa15.98■□□□□ 0.15
LSM4-202ENST00000593564 IGHV3-73A0A0B4J1V6 119 aa15.97■□□□□ 0.15
LSM4-202ENST00000593564 K7EQM0 130 aa15.97■□□□□ 0.15
LSM4-202ENST00000593564 GCGP01275 180 aa15.97■□□□□ 0.15
LSM4-202ENST00000593564 DEFA1P59665 94 aa15.97■□□□□ 0.15
LSM4-202ENST00000593564 DEFA3P59666 94 aa15.97■□□□□ 0.15
LSM4-202ENST00000593564 PSG8Q9UQ74 426 aa15.97■□□□□ 0.15
LSM4-202ENST00000593564 IGHV3-30P01768 117 aa15.96■□□□□ 0.15
LSM4-202ENST00000593564 IGHV3-33P01772 117 aa15.96■□□□□ 0.15
LSM4-202ENST00000593564 IGHV3-30-3P0DP02 117 aa15.96■□□□□ 0.15
LSM4-202ENST00000593564 IGHV3-30-5P0DP03 117 aa15.96■□□□□ 0.15
LSM4-202ENST00000593564 ZNF506Q5JVG8 444 aa15.96■□□□□ 0.15
LSM4-202ENST00000593564 GTSF1LQ9H1H1 148 aa15.96■□□□□ 0.15
LSM4-202ENST00000593564 IGLV2-11P01706 119 aa15.95■□□□□ 0.14
LSM4-202ENST00000593564 MGST1P10620 155 aaKnown RBP15.95■□□□□ 0.14
LSM4-202ENST00000593564 GCHFRP30047 84 aa15.95■□□□□ 0.14
LSM4-202ENST00000593564 LAGE3Q14657 143 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms