RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 LINC01556Q5JQF7 62 aa10.94□□□□□ -0.66
LIG1-205ENST00000593425 Q6ZSN1 163 aa10.94□□□□□ -0.66
LIG1-205ENST00000593425 NTN5Q8WTR8 489 aaPredicted RBP10.94□□□□□ -0.66
LIG1-205ENST00000593425 TVP23CQ96ET8 276 aa10.94□□□□□ -0.66
LIG1-205ENST00000593425 ATP5SQ99766 215 aa10.94□□□□□ -0.66
LIG1-205ENST00000593425 TRAV8-1A0A0A6YYK1 113 aa10.93□□□□□ -0.66
LIG1-205ENST00000593425 PGPA6NDG6 321 aa10.93□□□□□ -0.66
LIG1-205ENST00000593425 IBA57-AS1B1ANH7 110 aa10.93□□□□□ -0.66
LIG1-205ENST00000593425 MZT2BQ6NZ67 158 aa10.93□□□□□ -0.66
LIG1-205ENST00000593425 SH2D6Q7Z4S9 175 aa10.93□□□□□ -0.66
LIG1-205ENST00000593425 Q8N814 137 aa10.93□□□□□ -0.66
LIG1-205ENST00000593425 Q9HAA7 133 aa10.93□□□□□ -0.66
LIG1-205ENST00000593425 OTORQ9NRC9 128 aa10.93□□□□□ -0.66
LIG1-205ENST00000593425 FAM30AQ9NZY2 134 aa10.93□□□□□ -0.66
LIG1-205ENST00000593425 FLG2Q5D862 2391 aaPredicted RBP10.92□□□□□ -0.66
LIG1-205ENST00000593425 TRAV21A0A0B4J279 112 aa10.92□□□□□ -0.66
LIG1-205ENST00000593425 TAS2R45P59539 299 aa10.92□□□□□ -0.66
LIG1-205ENST00000593425 ASAH1Q13510 395 aa10.92□□□□□ -0.66
LIG1-205ENST00000593425 GOLT1AQ6ZVE7 132 aa10.92□□□□□ -0.66
LIG1-205ENST00000593425 HSPB11Q9Y547 144 aa10.92□□□□□ -0.66
LIG1-205ENST00000593425 FBLL1A6NHQ2 334 aaKnown RBP10.91□□□□□ -0.66
LIG1-205ENST00000593425 H2BFSP57053 126 aa10.91□□□□□ -0.66
LIG1-205ENST00000593425 SLC25A29Q8N8R3 303 aa10.91□□□□□ -0.66
LIG1-205ENST00000593425 CMTM2Q8TAZ6 248 aa10.91□□□□□ -0.66
LIG1-205ENST00000593425 SMIM3Q9BZL3 60 aa10.91□□□□□ -0.66
LIG1-205ENST00000593425 SDF2L1Q9HCN8 221 aa10.91□□□□□ -0.66
LIG1-205ENST00000593425 MBD2Q9UBB5 411 aa10.91□□□□□ -0.66
LIG1-205ENST00000593425 IGHV3-30P01768 117 aa10.9□□□□□ -0.66
LIG1-205ENST00000593425 IGHV3-33P01772 117 aa10.9□□□□□ -0.66
LIG1-205ENST00000593425 IGHV3-30-3P0DP02 117 aa10.9□□□□□ -0.66
LIG1-205ENST00000593425 IGHV3-30-5P0DP03 117 aa10.9□□□□□ -0.66
LIG1-205ENST00000593425 GNG5P63218 68 aa10.9□□□□□ -0.66
LIG1-205ENST00000593425 OR10J3Q5JRS4 329 aa10.9□□□□□ -0.66
LIG1-205ENST00000593425 DPPA3Q6W0C5 159 aa10.9□□□□□ -0.66
LIG1-205ENST00000593425 ENKURQ8TC29 256 aa10.9□□□□□ -0.66
LIG1-205ENST00000593425 PPP1R1CQ8WVI7 109 aa10.9□□□□□ -0.66
LIG1-205ENST00000593425 TREM1Q9NP99 234 aa10.9□□□□□ -0.66
LIG1-205ENST00000593425 TRAV8-6A0A0B4J262 113 aa10.89□□□□□ -0.67
LIG1-205ENST00000593425 CYCSP99999 105 aaKnown RBP10.89□□□□□ -0.67
LIG1-205ENST00000593425 FAM74A1Q5RGS3 127 aa10.89□□□□□ -0.67
LIG1-205ENST00000593425 CFAP126Q5VTH2 177 aa10.89□□□□□ -0.67
LIG1-205ENST00000593425 ASB13Q8WXK3 278 aa10.89□□□□□ -0.67
LIG1-205ENST00000593425 KCNS1Q96KK3 526 aa10.89□□□□□ -0.67
LIG1-205ENST00000593425 SGK494Q96LW2 274 aa10.89□□□□□ -0.67
LIG1-205ENST00000593425 IGHV3-73A0A0B4J1V6 119 aa10.88□□□□□ -0.67
LIG1-205ENST00000593425 RS1O15537 224 aa10.88□□□□□ -0.67
LIG1-205ENST00000593425 PFN1P07737 140 aaKnown RBP10.88□□□□□ -0.67
LIG1-205ENST00000593425 WFDC2Q14508 124 aa10.88□□□□□ -0.67
LIG1-205ENST00000593425 RHOHQ15669 191 aa10.88□□□□□ -0.67
LIG1-205ENST00000593425 SCGB1C1Q8TD33 95 aa10.88□□□□□ -0.67
LIG1-205ENST00000593425 C11orf21Q9P2W6 132 aa10.88□□□□□ -0.67
LIG1-205ENST00000593425 SRRM2Q9UQ35 2752 aaKnown RBP10.87□□□□□ -0.67
LIG1-205ENST00000593425 TRBV6-4A0A1B0GX49 114 aa10.87□□□□□ -0.67
LIG1-205ENST00000593425 HMGB3O15347 200 aaKnown RBP10.87□□□□□ -0.67
LIG1-205ENST00000593425 MPC2O95563 127 aa10.87□□□□□ -0.67
LIG1-205ENST00000593425 ZNF80P51504 273 aaPredicted RBP10.87□□□□□ -0.67
LIG1-205ENST00000593425 RAB2AP61019 212 aa10.87□□□□□ -0.67
LIG1-205ENST00000593425 ZNF876PQ49A33 203 aa10.87□□□□□ -0.67
LIG1-205ENST00000593425 LELP1Q5T871 98 aa10.87□□□□□ -0.67
LIG1-205ENST00000593425 PQLC2Q6ZP29 291 aa10.87□□□□□ -0.67
LIG1-205ENST00000593425 Q8N3U1 123 aa10.87□□□□□ -0.67
LIG1-205ENST00000593425 ARL6IP6Q8N6S5 226 aa10.87□□□□□ -0.67
LIG1-205ENST00000593425 PRADC1Q9BSG0 188 aa10.87□□□□□ -0.67
LIG1-205ENST00000593425 WFDC1Q9HC57 220 aa10.87□□□□□ -0.67
LIG1-205ENST00000593425 NDUFA13Q9P0J0 144 aa10.87□□□□□ -0.67
LIG1-205ENST00000593425 RPL12P30050 165 aaKnown RBP10.86□□□□□ -0.67
LIG1-205ENST00000593425 TMEM75Q8N9X5 138 aa10.86□□□□□ -0.67
LIG1-205ENST00000593425 INMT-MINDY4F8WBC2 141 aa10.85□□□□□ -0.67
LIG1-205ENST00000593425 J3QL48 77 aa10.85□□□□□ -0.67
LIG1-205ENST00000593425 IFITM3Q01628 133 aa10.85□□□□□ -0.67
LIG1-205ENST00000593425 ACOT6Q3I5F7 207 aaPredicted RBP10.85□□□□□ -0.67
LIG1-205ENST00000593425 C9orf85Q96MD7 179 aa10.85□□□□□ -0.67
LIG1-205ENST00000593425 GTSF1LQ9H1H1 148 aa10.85□□□□□ -0.67
LIG1-205ENST00000593425 A0A1W2PPV4 95 aa10.84□□□□□ -0.67
LIG1-205ENST00000593425 PGPEP1LA6NFU8 196 aa10.84□□□□□ -0.67
LIG1-205ENST00000593425 UPK1BO75841 260 aa10.84□□□□□ -0.67
LIG1-205ENST00000593425 C1QBP02746 253 aa10.84□□□□□ -0.67
LIG1-205ENST00000593425 LAGE3Q14657 143 aa10.84□□□□□ -0.67
LIG1-205ENST00000593425 ZNF506Q5JVG8 444 aa10.84□□□□□ -0.67
LIG1-205ENST00000593425 LINC00299Q6ZSB3 139 aa10.84□□□□□ -0.67
LIG1-205ENST00000593425 ATP6V0E2Q8NHE4 81 aa10.84□□□□□ -0.67
LIG1-205ENST00000593425 S100ZQ8WXG8 99 aa10.84□□□□□ -0.67
LIG1-205ENST00000593425 BOLA1Q9Y3E2 137 aa10.84□□□□□ -0.67
LIG1-205ENST00000593425 CIDEAO60543 219 aa10.83□□□□□ -0.68
LIG1-205ENST00000593425 GCGP01275 180 aa10.83□□□□□ -0.68
LIG1-205ENST00000593425 PET100P0DJ07 73 aa10.83□□□□□ -0.68
LIG1-205ENST00000593425 Q6ZSA8 131 aa10.83□□□□□ -0.68
LIG1-205ENST00000593425 NDFIP1Q9BT67 221 aa10.83□□□□□ -0.68
LIG1-205ENST00000593425 LECT2O14960 151 aa10.82□□□□□ -0.68
LIG1-205ENST00000593425 TCRAP04437 139 aa10.82□□□□□ -0.68
LIG1-205ENST00000593425 ARL14EPLP0DKL9 152 aa10.82□□□□□ -0.68
LIG1-205ENST00000593425 MGST1P10620 155 aaKnown RBP10.82□□□□□ -0.68
LIG1-205ENST00000593425 RNASE3P12724 160 aaKnown RBP10.82□□□□□ -0.68
LIG1-205ENST00000593425 OR10G9Q8NGN4 311 aa10.82□□□□□ -0.68
LIG1-205ENST00000593425 OR10G7Q8NGN6 311 aa10.82□□□□□ -0.68
LIG1-205ENST00000593425 TM2D2Q9BX73 214 aa10.82□□□□□ -0.68
LIG1-205ENST00000593425 SERTM2A0A1B0GWG4 89 aa10.81□□□□□ -0.68
LIG1-205ENST00000593425 TAAR5O14804 337 aa10.81□□□□□ -0.68
LIG1-205ENST00000593425 SSNA1O43805 119 aa10.81□□□□□ -0.68
LIG1-205ENST00000593425 IGLV2-11P01706 119 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms