RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 IGKV3D-20A0A0C4DH25 116 aa9.91□□□□□ -0.82
VMP1-217ENST00000593168 C7orf71A4D174 169 aa9.91□□□□□ -0.82
VMP1-217ENST00000593168 RBMY1BA6NDE4 496 aaKnown RBP9.91□□□□□ -0.82
VMP1-217ENST00000593168 RBMY1EA6NEQ0 496 aaKnown RBP9.91□□□□□ -0.82
VMP1-217ENST00000593168 J3KRW8 73 aa9.91□□□□□ -0.82
VMP1-217ENST00000593168 TYMSP04818 313 aa9.91□□□□□ -0.82
VMP1-217ENST00000593168 RBMY1DP0C7P1 496 aaKnown RBP9.91□□□□□ -0.82
VMP1-217ENST00000593168 TRPT1Q86TN4 253 aaKnown RBP9.91□□□□□ -0.82
VMP1-217ENST00000593168 STHQ8IWL8 128 aa9.91□□□□□ -0.82
VMP1-217ENST00000593168 NUP35Q8NFH5 326 aa9.91□□□□□ -0.82
VMP1-217ENST00000593168 GTSF1Q8WW33 167 aa9.91□□□□□ -0.82
VMP1-217ENST00000593168 C11orf21Q9P2W6 132 aa9.91□□□□□ -0.82
VMP1-217ENST00000593168 HIGD1CA8MV81 97 aa9.9□□□□□ -0.82
VMP1-217ENST00000593168 RAB5AP20339 215 aa9.9□□□□□ -0.82
VMP1-217ENST00000593168 TCL1AP56279 114 aa9.9□□□□□ -0.82
VMP1-217ENST00000593168 KIR3DS1Q14943 382 aa9.9□□□□□ -0.82
VMP1-217ENST00000593168 SPINK13Q1W4C9 94 aa9.9□□□□□ -0.82
VMP1-217ENST00000593168 GFI1BQ5VTD9 330 aa9.9□□□□□ -0.82
VMP1-217ENST00000593168 ZNF575Q86XF7 245 aa9.9□□□□□ -0.82
VMP1-217ENST00000593168 TMSB15BA0A087X1C1 80 aa9.89□□□□□ -0.83
VMP1-217ENST00000593168 M0R2Z0 102 aa9.89□□□□□ -0.83
VMP1-217ENST00000593168 ZNF324O75467 553 aaPredicted RBP9.89□□□□□ -0.83
VMP1-217ENST00000593168 AMBPP02760 352 aa9.89□□□□□ -0.83
VMP1-217ENST00000593168 GZMBP10144 247 aa9.89□□□□□ -0.83
VMP1-217ENST00000593168 KRTAP10-11P60412 298 aa9.89□□□□□ -0.83
VMP1-217ENST00000593168 DEFB121Q5J5C9 76 aa9.89□□□□□ -0.83
VMP1-217ENST00000593168 Q6ZQT7 251 aa9.89□□□□□ -0.83
VMP1-217ENST00000593168 GTSCR1Q86UQ5 136 aa9.89□□□□□ -0.83
VMP1-217ENST00000593168 WWC2-AS2Q96NR7 200 aa9.89□□□□□ -0.83
VMP1-217ENST00000593168 EPPK1P58107 5090 aaKnown RBP9.89□□□□□ -0.83
VMP1-217ENST00000593168 TRAV12-2A0A075B6T6 113 aa9.88□□□□□ -0.83
VMP1-217ENST00000593168 TRAV12-3A0A0B4J271 114 aa9.88□□□□□ -0.83
VMP1-217ENST00000593168 CRXO43186 299 aaPredicted RBP9.88□□□□□ -0.83
VMP1-217ENST00000593168 IGLC6P0CF74 106 aa9.88□□□□□ -0.83
VMP1-217ENST00000593168 NUTF2P61970 127 aaKnown RBP9.88□□□□□ -0.83
VMP1-217ENST00000593168 COX19Q49B96 90 aa9.88□□□□□ -0.83
VMP1-217ENST00000593168 C20orf144Q9BQM9 153 aa9.88□□□□□ -0.83
VMP1-217ENST00000593168 SRD5A3Q9H8P0 318 aa9.88□□□□□ -0.83
VMP1-217ENST00000593168 BIRC6Q9NR09 4857 aa9.88□□□□□ -0.83
VMP1-217ENST00000593168 TDRG1Q3Y452 100 aa9.87□□□□□ -0.83
VMP1-217ENST00000593168 ANXA2RQ3ZCQ2 193 aa9.87□□□□□ -0.83
VMP1-217ENST00000593168 DNLZQ5SXM8 178 aa9.87□□□□□ -0.83
VMP1-217ENST00000593168 RASL11AQ6T310 242 aa9.87□□□□□ -0.83
VMP1-217ENST00000593168 ATP5L2Q7Z4Y8 100 aa9.87□□□□□ -0.83
VMP1-217ENST00000593168 KCNS1Q96KK3 526 aa9.87□□□□□ -0.83
VMP1-217ENST00000593168 PGLYRP4Q96LB8 373 aa9.87□□□□□ -0.83
VMP1-217ENST00000593168 DYNC2H1Q8NCM8 4307 aaKnown RBP9.86□□□□□ -0.83
VMP1-217ENST00000593168 RPS10P46783 165 aaKnown RBP9.86□□□□□ -0.83
VMP1-217ENST00000593168 FXYD7P58549 80 aa9.86□□□□□ -0.83
VMP1-217ENST00000593168 MORN3Q6PF18 240 aaPredicted RBP9.86□□□□□ -0.83
VMP1-217ENST00000593168 FAM159AQ6UWV7 190 aa9.86□□□□□ -0.83
VMP1-217ENST00000593168 FER1L6-AS1Q8NA97 138 aa9.86□□□□□ -0.83
VMP1-217ENST00000593168 ZMAT5Q9UDW3 170 aaKnown RBP9.86□□□□□ -0.83
VMP1-217ENST00000593168 NAGKQ9UJ70 344 aa9.86□□□□□ -0.83
VMP1-217ENST00000593168 A0A1B0GUT8 65 aa9.85□□□□□ -0.83
VMP1-217ENST00000593168 GRIFINA4D1Z8 144 aa9.85□□□□□ -0.83
VMP1-217ENST00000593168 F2Z2F3 143 aa9.85□□□□□ -0.83
VMP1-217ENST00000593168 SPINK4O60575 86 aa9.85□□□□□ -0.83
VMP1-217ENST00000593168 CTRLP40313 264 aa9.85□□□□□ -0.83
VMP1-217ENST00000593168 MUC21Q5SSG8 566 aa9.85□□□□□ -0.83
VMP1-217ENST00000593168 MRPL54Q6P161 138 aaKnown RBP9.85□□□□□ -0.83
VMP1-217ENST00000593168 Q8N1Y9 231 aa9.85□□□□□ -0.83
VMP1-217ENST00000593168 DEFB125Q8N687 156 aa9.85□□□□□ -0.83
VMP1-217ENST00000593168 BORCS7Q96B45 105 aa9.85□□□□□ -0.83
VMP1-217ENST00000593168 SSBP4Q9BWG4 385 aaPredicted RBP9.85□□□□□ -0.83
VMP1-217ENST00000593168 WFDC10AQ9H1F0 79 aa9.85□□□□□ -0.83
VMP1-217ENST00000593168 IGHV1OR15-1A0A075B7D0 117 aa9.84□□□□□ -0.83
VMP1-217ENST00000593168 A0A1B0GW15 77 aa9.84□□□□□ -0.83
VMP1-217ENST00000593168 A0A1B0GXF2 115 aa9.84□□□□□ -0.83
VMP1-217ENST00000593168 OR5AL1P0C617 328 aa9.84□□□□□ -0.83
VMP1-217ENST00000593168 MED14OSP0DP75 135 aa9.84□□□□□ -0.83
VMP1-217ENST00000593168 EGFEM1PQ0D2K5 195 aa9.84□□□□□ -0.83
VMP1-217ENST00000593168 RIGQ13278 110 aa9.84□□□□□ -0.83
VMP1-217ENST00000593168 WDR73Q6P4I2 378 aa9.84□□□□□ -0.83
VMP1-217ENST00000593168 LYZL1Q6UWQ5 148 aa9.84□□□□□ -0.83
VMP1-217ENST00000593168 B9D2Q9BPU9 175 aa9.84□□□□□ -0.83
VMP1-217ENST00000593168 LINC00467Q9BRT7 94 aa9.84□□□□□ -0.83
VMP1-217ENST00000593168 CNFNQ9BYD5 112 aa9.84□□□□□ -0.83
VMP1-217ENST00000593168 KRTAP3-3Q9BYR6 98 aa9.84□□□□□ -0.83
VMP1-217ENST00000593168 KRTAP3-2Q9BYR7 98 aa9.84□□□□□ -0.83
VMP1-217ENST00000593168 GNRH2O43555 120 aa9.83□□□□□ -0.84
VMP1-217ENST00000593168 SNAI2O43623 268 aa9.83□□□□□ -0.84
VMP1-217ENST00000593168 INSP01308 110 aa9.83□□□□□ -0.84
VMP1-217ENST00000593168 FRMD6-AS1P0C7T7 363 aa9.83□□□□□ -0.84
VMP1-217ENST00000593168 RBMY1A1P0DJD3 496 aaKnown RBP9.83□□□□□ -0.84
VMP1-217ENST00000593168 RBMY1CP0DJD4 496 aa9.83□□□□□ -0.84
VMP1-217ENST00000593168 ASIPP42127 132 aa9.83□□□□□ -0.84
VMP1-217ENST00000593168 RBMY1FQ15415 496 aaKnown RBP9.83□□□□□ -0.84
VMP1-217ENST00000593168 C1QTNF4Q9BXJ3 329 aa9.83□□□□□ -0.84
VMP1-217ENST00000593168 GNB1LQ9BYB4 327 aa9.83□□□□□ -0.84
VMP1-217ENST00000593168 DNAH7Q8WXX0 4024 aa9.82□□□□□ -0.84
VMP1-217ENST00000593168 MT-ND6P03923 174 aa9.82□□□□□ -0.84
VMP1-217ENST00000593168 S100A8P05109 93 aa9.82□□□□□ -0.84
VMP1-217ENST00000593168 ARMS2P0C7Q2 107 aa9.82□□□□□ -0.84
VMP1-217ENST00000593168 RPL35AP18077 110 aaKnown RBP9.82□□□□□ -0.84
VMP1-217ENST00000593168 CACNG7P62955 275 aa9.82□□□□□ -0.84
VMP1-217ENST00000593168 HBBP68871 147 aa9.82□□□□□ -0.84
VMP1-217ENST00000593168 TMEM256Q8N2U0 113 aa9.82□□□□□ -0.84
VMP1-217ENST00000593168 TPPP3Q9BW30 176 aa9.82□□□□□ -0.84
VMP1-217ENST00000593168 SCRT2Q9NQ03 307 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms