RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 TRAV21A0A0B4J279 112 aa13.85□□□□□ -0.19
TRIM47-207ENST00000593089 A0A1W2PPV4 95 aa13.85□□□□□ -0.19
TRIM47-207ENST00000593089 M0R2P5 195 aa13.85□□□□□ -0.19
TRIM47-207ENST00000593089 TYMSP04818 313 aa13.85□□□□□ -0.19
TRIM47-207ENST00000593089 ACOT6Q3I5F7 207 aaPredicted RBP13.85□□□□□ -0.19
TRIM47-207ENST00000593089 TVP23CQ96ET8 276 aa13.85□□□□□ -0.19
TRIM47-207ENST00000593089 TRAV8-1A0A0A6YYK1 113 aa13.84□□□□□ -0.19
TRIM47-207ENST00000593089 K7EP13 123 aa13.84□□□□□ -0.19
TRIM47-207ENST00000593089 HMGB3O15347 200 aaKnown RBP13.84□□□□□ -0.19
TRIM47-207ENST00000593089 XGP55808 180 aa13.84□□□□□ -0.19
TRIM47-207ENST00000593089 RAB2AP61019 212 aa13.84□□□□□ -0.19
TRIM47-207ENST00000593089 GNG5P63218 68 aa13.84□□□□□ -0.19
TRIM47-207ENST00000593089 PQLC2Q6ZP29 291 aa13.84□□□□□ -0.19
TRIM47-207ENST00000593089 TREM1Q9NP99 234 aa13.84□□□□□ -0.19
TRIM47-207ENST00000593089 CRYGDP07320 174 aa13.83□□□□□ -0.2
TRIM47-207ENST00000593089 KRTAP10-1P60331 282 aa13.83□□□□□ -0.2
TRIM47-207ENST00000593089 NHLRC2Q8NBF2 726 aa13.83□□□□□ -0.2
TRIM47-207ENST00000593089 SDF2L1Q9HCN8 221 aa13.83□□□□□ -0.2
TRIM47-207ENST00000593089 SGK494Q96LW2 274 aa13.82□□□□□ -0.2
TRIM47-207ENST00000593089 FAT1Q14517 4588 aa13.81□□□□□ -0.2
TRIM47-207ENST00000593089 PPT1P50897 306 aa13.81□□□□□ -0.2
TRIM47-207ENST00000593089 C10orf126Q8N4M7 172 aa13.81□□□□□ -0.2
TRIM47-207ENST00000593089 OR10G9Q8NGN4 311 aa13.81□□□□□ -0.2
TRIM47-207ENST00000593089 OR10G7Q8NGN6 311 aa13.81□□□□□ -0.2
TRIM47-207ENST00000593089 KCNS1Q96KK3 526 aa13.81□□□□□ -0.2
TRIM47-207ENST00000593089 GATA1P15976 413 aaPredicted RBP13.8□□□□□ -0.2
TRIM47-207ENST00000593089 DEFA1P59665 94 aa13.8□□□□□ -0.2
TRIM47-207ENST00000593089 DEFA3P59666 94 aa13.8□□□□□ -0.2
TRIM47-207ENST00000593089 SH2D6Q7Z4S9 175 aa13.8□□□□□ -0.2
TRIM47-207ENST00000593089 ARL6IP6Q8N6S5 226 aa13.8□□□□□ -0.2
TRIM47-207ENST00000593089 ASB13Q8WXK3 278 aa13.8□□□□□ -0.2
TRIM47-207ENST00000593089 ARL14EPLP0DKL9 152 aa13.79□□□□□ -0.2
TRIM47-207ENST00000593089 IGHV3-38A0A0C4DH36 116 aa13.78□□□□□ -0.2
TRIM47-207ENST00000593089 FBLL1A6NHQ2 334 aaKnown RBP13.78□□□□□ -0.2
TRIM47-207ENST00000593089 INAFM2P0DMQ5 153 aa13.78□□□□□ -0.2
TRIM47-207ENST00000593089 NDFIP1Q9BT67 221 aa13.78□□□□□ -0.2
TRIM47-207ENST00000593089 PSCAO43653 123 aa13.77□□□□□ -0.21
TRIM47-207ENST00000593089 GCSHP23434 173 aa13.77□□□□□ -0.21
TRIM47-207ENST00000593089 CDC34P49427 236 aaPredicted RBP13.77□□□□□ -0.21
TRIM47-207ENST00000593089 ZNF80P51504 273 aaPredicted RBP13.77□□□□□ -0.21
TRIM47-207ENST00000593089 ZNF876PQ49A33 203 aa13.77□□□□□ -0.21
TRIM47-207ENST00000593089 Q5VSD8 79 aa13.77□□□□□ -0.21
TRIM47-207ENST00000593089 SLC25A29Q8N8R3 303 aa13.77□□□□□ -0.21
TRIM47-207ENST00000593089 FRZBQ92765 325 aa13.77□□□□□ -0.21
TRIM47-207ENST00000593089 IGHV3-73A0A0B4J1V6 119 aa13.76□□□□□ -0.21
TRIM47-207ENST00000593089 TIRAPP58753 221 aa13.76□□□□□ -0.21
TRIM47-207ENST00000593089 C11orf21Q9P2W6 132 aa13.76□□□□□ -0.21
TRIM47-207ENST00000593089 SERTM2A0A1B0GWG4 89 aa13.75□□□□□ -0.21
TRIM47-207ENST00000593089 A6NHS1 94 aa13.75□□□□□ -0.21
TRIM47-207ENST00000593089 TCRAP04437 139 aa13.75□□□□□ -0.21
TRIM47-207ENST00000593089 PFN1P07737 140 aaKnown RBP13.75□□□□□ -0.21
TRIM47-207ENST00000593089 STAG3L2P0CL84 134 aa13.75□□□□□ -0.21
TRIM47-207ENST00000593089 STAG3L3P0CL85 134 aa13.75□□□□□ -0.21
TRIM47-207ENST00000593089 LINC01556Q5JQF7 62 aa13.75□□□□□ -0.21
TRIM47-207ENST00000593089 OR10J3Q5JRS4 329 aa13.75□□□□□ -0.21
TRIM47-207ENST00000593089 CFAP126Q5VTH2 177 aa13.75□□□□□ -0.21
TRIM47-207ENST00000593089 DPPA3Q6W0C5 159 aa13.75□□□□□ -0.21
TRIM47-207ENST00000593089 HSD17B11Q8NBQ5 300 aa13.75□□□□□ -0.21
TRIM47-207ENST00000593089 PRADC1Q9BSG0 188 aa13.75□□□□□ -0.21
TRIM47-207ENST00000593089 HERC1Q15751 4861 aa13.74□□□□□ -0.21
TRIM47-207ENST00000593089 TRAV8-6A0A0B4J262 113 aa13.74□□□□□ -0.21
TRIM47-207ENST00000593089 RS1O15537 224 aa13.74□□□□□ -0.21
TRIM47-207ENST00000593089 GCGP01275 180 aa13.74□□□□□ -0.21
TRIM47-207ENST00000593089 TMEM75Q8N9X5 138 aa13.74□□□□□ -0.21
TRIM47-207ENST00000593089 C5orf17Q8NAS9 161 aa13.74□□□□□ -0.21
TRIM47-207ENST00000593089 Q9HAA7 133 aa13.74□□□□□ -0.21
TRIM47-207ENST00000593089 PSG8Q9UQ74 426 aa13.74□□□□□ -0.21
TRIM47-207ENST00000593089 IGLV5-52A0A0A0MRZ9 124 aa13.73□□□□□ -0.21
TRIM47-207ENST00000593089 K7EQM0 130 aa13.73□□□□□ -0.21
TRIM47-207ENST00000593089 TAAR5O14804 337 aa13.73□□□□□ -0.21
TRIM47-207ENST00000593089 SMR3BP02814 79 aaPredicted RBP13.73□□□□□ -0.21
TRIM47-207ENST00000593089 GCHFRP30047 84 aa13.73□□□□□ -0.21
TRIM47-207ENST00000593089 HAMPP81172 84 aa13.73□□□□□ -0.21
TRIM47-207ENST00000593089 RHOHQ15669 191 aa13.73□□□□□ -0.21
TRIM47-207ENST00000593089 RAB24Q969Q5 203 aa13.73□□□□□ -0.21
TRIM47-207ENST00000593089 TRBV6-4A0A1B0GX49 114 aa13.72□□□□□ -0.21
TRIM47-207ENST00000593089 LRCOL1A6NCL2 159 aa13.72□□□□□ -0.21
TRIM47-207ENST00000593089 IBA57-AS1B1ANH7 110 aa13.72□□□□□ -0.21
TRIM47-207ENST00000593089 CIDEAO60543 219 aa13.72□□□□□ -0.21
TRIM47-207ENST00000593089 IGHV3-30P01768 117 aa13.72□□□□□ -0.21
TRIM47-207ENST00000593089 IGHV3-33P01772 117 aa13.72□□□□□ -0.21
TRIM47-207ENST00000593089 IGHV3-30-3P0DP02 117 aa13.72□□□□□ -0.21
TRIM47-207ENST00000593089 IGHV3-30-5P0DP03 117 aa13.72□□□□□ -0.21
TRIM47-207ENST00000593089 PRNTQ86SH4 94 aa13.72□□□□□ -0.21
TRIM47-207ENST00000593089 OR2G3Q8NGZ4 309 aa13.72□□□□□ -0.21
TRIM47-207ENST00000593089 C9orf85Q96MD7 179 aa13.72□□□□□ -0.21
TRIM47-207ENST00000593089 PGPEP1LA6NFU8 196 aa13.71□□□□□ -0.21
TRIM47-207ENST00000593089 SUMO1P63165 101 aaKnown RBP13.71□□□□□ -0.21
TRIM47-207ENST00000593089 FLI1Q01543 452 aaPredicted RBP13.71□□□□□ -0.21
TRIM47-207ENST00000593089 ZFP69Q49AA0 526 aa13.71□□□□□ -0.21
TRIM47-207ENST00000593089 ZNF506Q5JVG8 444 aa13.71□□□□□ -0.21
TRIM47-207ENST00000593089 ALG5Q9Y673 324 aa13.71□□□□□ -0.21
TRIM47-207ENST00000593089 IGLV2-11P01706 119 aa13.7□□□□□ -0.22
TRIM47-207ENST00000593089 ATP6V0CP27449 155 aa13.7□□□□□ -0.22
TRIM47-207ENST00000593089 SMUG1Q53HV7 270 aa13.7□□□□□ -0.22
TRIM47-207ENST00000593089 LELP1Q5T871 98 aa13.7□□□□□ -0.22
TRIM47-207ENST00000593089 SUN5Q8TC36 379 aa13.7□□□□□ -0.22
TRIM47-207ENST00000593089 PSMG3Q9BT73 122 aaPredicted RBP13.7□□□□□ -0.22
TRIM47-207ENST00000593089 EPDR1Q9UM22 224 aa13.7□□□□□ -0.22
TRIM47-207ENST00000593089 GGTLC3B5MD39 225 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms