RNA–Protein interactions for RNA: ENST00000592395.5

TCF3-216, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 996 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-216ENST00000592395 ZNF415Q09FC8 603 aa13.16□□□□□ -0.3
TCF3-216ENST00000592395 TDRG1Q3Y452 100 aa13.16□□□□□ -0.3
TCF3-216ENST00000592395 SMUG1Q53HV7 270 aa13.16□□□□□ -0.3
TCF3-216ENST00000592395 LGALS9CQ6DKI2 356 aa13.16□□□□□ -0.3
TCF3-216ENST00000592395 NAGKQ9UJ70 344 aa13.16□□□□□ -0.3
TCF3-216ENST00000592395 KLF12Q9Y4X4 402 aa13.16□□□□□ -0.3
TCF3-216ENST00000592395 TRGV11A0A075B6L2 103 aa13.15□□□□□ -0.3
TCF3-216ENST00000592395 GAGE12BA1L429 117 aa13.15□□□□□ -0.3
TCF3-216ENST00000592395 TEX46H3BTG2 121 aa13.15□□□□□ -0.3
TCF3-216ENST00000592395 GAGE7O76087 117 aa13.15□□□□□ -0.3
TCF3-216ENST00000592395 GAGE12FP0CL80 117 aa13.15□□□□□ -0.3
TCF3-216ENST00000592395 GAGE12GP0CL81 117 aa13.15□□□□□ -0.3
TCF3-216ENST00000592395 GAGE12IP0CL82 117 aa13.15□□□□□ -0.3
TCF3-216ENST00000592395 Q6ZTI0 123 aa13.15□□□□□ -0.3
TCF3-216ENST00000592395 Q86TA4 180 aa13.15□□□□□ -0.3
TCF3-216ENST00000592395 GCGP01275 180 aa13.14□□□□□ -0.31
TCF3-216ENST00000592395 ZNF80P51504 273 aaPredicted RBP13.14□□□□□ -0.31
TCF3-216ENST00000592395 TMEM183BQ1AE95 376 aa13.14□□□□□ -0.31
TCF3-216ENST00000592395 TMEM183AQ8IXX5 376 aa13.14□□□□□ -0.31
TCF3-216ENST00000592395 FMC1Q96HJ9 113 aa13.14□□□□□ -0.31
TCF3-216ENST00000592395 MANBALQ9NQG1 85 aa13.14□□□□□ -0.31
TCF3-216ENST00000592395 DNAH1Q9P2D7 4330 aa13.13□□□□□ -0.31
TCF3-216ENST00000592395 RYR3Q15413 4870 aa13.13□□□□□ -0.31
TCF3-216ENST00000592395 TRGV1A0A0A0MS02 117 aa13.13□□□□□ -0.31
TCF3-216ENST00000592395 F5H768 121 aa13.13□□□□□ -0.31
TCF3-216ENST00000592395 SPINK4O60575 86 aa13.13□□□□□ -0.31
TCF3-216ENST00000592395 PFN1P07737 140 aaKnown RBP13.13□□□□□ -0.31
TCF3-216ENST00000592395 AKR1C3P42330 323 aa13.13□□□□□ -0.31
TCF3-216ENST00000592395 NKX2-5P52952 324 aaPredicted RBP13.13□□□□□ -0.31
TCF3-216ENST00000592395 UBE2G1P62253 170 aa13.13□□□□□ -0.31
TCF3-216ENST00000592395 TMEM88Q6PEY1 159 aa13.13□□□□□ -0.31
TCF3-216ENST00000592395 KCNS1Q96KK3 526 aa13.13□□□□□ -0.31
TCF3-216ENST00000592395 TRBV6-1A0A0K0K1D8 114 aa13.12□□□□□ -0.31
TCF3-216ENST00000592395 CCL20P78556 96 aa13.12□□□□□ -0.31
TCF3-216ENST00000592395 LGALS9BQ3B8N2 356 aa13.12□□□□□ -0.31
TCF3-216ENST00000592395 C18orf15Q96N68 181 aa13.12□□□□□ -0.31
TCF3-216ENST00000592395 SDF2L1Q9HCN8 221 aa13.12□□□□□ -0.31
TCF3-216ENST00000592395 MDFICQ9P1T7 246 aa13.12□□□□□ -0.31
TCF3-216ENST00000592395 GNG13Q9P2W3 67 aa13.12□□□□□ -0.31
TCF3-216ENST00000592395 ZFP30Q9Y2G7 519 aa13.12□□□□□ -0.31
TCF3-216ENST00000592395 RYR2Q92736 4967 aa13.11□□□□□ -0.31
TCF3-216ENST00000592395 TYMSP04818 313 aa13.11□□□□□ -0.31
TCF3-216ENST00000592395 SPXQ9BT56 116 aa13.11□□□□□ -0.31
TCF3-216ENST00000592395 TRGV2A0A075B6R0 118 aa13.1□□□□□ -0.31
TCF3-216ENST00000592395 IGHV3-16A0A0C4DH30 117 aa13.1□□□□□ -0.31
TCF3-216ENST00000592395 SCO2A0A1W2PP80 73 aa13.1□□□□□ -0.31
TCF3-216ENST00000592395 GNRH2O43555 120 aa13.1□□□□□ -0.31
TCF3-216ENST00000592395 S100A9P06702 114 aaKnown RBP13.1□□□□□ -0.31
TCF3-216ENST00000592395 C15orf53Q8NAA6 179 aa13.1□□□□□ -0.31
TCF3-216ENST00000592395 MRPL16Q9NX20 251 aaKnown RBP13.1□□□□□ -0.31
TCF3-216ENST00000592395 LTAP01374 205 aa13.09□□□□□ -0.31
TCF3-216ENST00000592395 ALKAL2Q6UX46 152 aa13.09□□□□□ -0.31
TCF3-216ENST00000592395 COX8CQ7Z4L0 72 aa13.09□□□□□ -0.31
TCF3-216ENST00000592395 TXNDC17Q9BRA2 123 aa13.09□□□□□ -0.31
TCF3-216ENST00000592395 C11orf21Q9P2W6 132 aa13.09□□□□□ -0.31
TCF3-216ENST00000592395 FABP5P3A8MUU1 101 aa13.08□□□□□ -0.32
TCF3-216ENST00000592395 IFNA1P01562 189 aa13.08□□□□□ -0.32
TCF3-216ENST00000592395 P0DMU3 169 aa13.08□□□□□ -0.32
TCF3-216ENST00000592395 FAM231AP0DMU4 169 aa13.08□□□□□ -0.32
TCF3-216ENST00000592395 FAM231CP0DMU5 169 aa13.08□□□□□ -0.32
TCF3-216ENST00000592395 OR5I1Q13606 314 aa13.07□□□□□ -0.32
TCF3-216ENST00000592395 ZC2HC1AQ96GY0 325 aa13.07□□□□□ -0.32
TCF3-216ENST00000592395 HOXA5P20719 270 aa13.06□□□□□ -0.32
TCF3-216ENST00000592395 RASL10AQ92737 203 aa13.06□□□□□ -0.32
TCF3-216ENST00000592395 C11orf52Q96A22 123 aa13.06□□□□□ -0.32
TCF3-216ENST00000592395 M0R2P5 195 aa13.05□□□□□ -0.32
TCF3-216ENST00000592395 BLOC1S1P78537 153 aa13.05□□□□□ -0.32
TCF3-216ENST00000592395 MEF2BQ02080 365 aaPredicted RBP13.05□□□□□ -0.32
TCF3-216ENST00000592395 FAM162BQ5T6X4 162 aa13.05□□□□□ -0.32
TCF3-216ENST00000592395 CDPF1Q6NVV7 123 aa13.05□□□□□ -0.32
TCF3-216ENST00000592395 HYDINQ4G0P3 5121 aa13.05□□□□□ -0.32
TCF3-216ENST00000592395 TRAV26-1A0A087WT03 109 aa13.04□□□□□ -0.32
TCF3-216ENST00000592395 BCL2P10415 239 aa13.04□□□□□ -0.32
TCF3-216ENST00000592395 TAGLN2P37802 199 aaKnown RBP13.04□□□□□ -0.32
TCF3-216ENST00000592395 CRIP1P50238 77 aa13.04□□□□□ -0.32
TCF3-216ENST00000592395 SSBP4Q9BWG4 385 aaPredicted RBP13.04□□□□□ -0.32
TCF3-216ENST00000592395 MUC4Q99102 2169 aa13.04□□□□□ -0.32
TCF3-216ENST00000592395 IGKV3D-20A0A0C4DH25 116 aa13.03□□□□□ -0.32
TCF3-216ENST00000592395 PDE6DO43924 150 aa13.03□□□□□ -0.32
TCF3-216ENST00000592395 SH2D1AO60880 128 aa13.03□□□□□ -0.32
TCF3-216ENST00000592395 NUDT3O95989 172 aa13.03□□□□□ -0.32
TCF3-216ENST00000592395 ZNF674Q2M3X9 581 aa13.03□□□□□ -0.32
TCF3-216ENST00000592395 BAGE2Q86Y30 109 aa13.03□□□□□ -0.32
TCF3-216ENST00000592395 POM121L12Q8N7R1 296 aa13.03□□□□□ -0.32
TCF3-216ENST00000592395 VAX2Q9UIW0 290 aa13.03□□□□□ -0.32
TCF3-216ENST00000592395 H3BNG1 76 aa13.02□□□□□ -0.33
TCF3-216ENST00000592395 IGHV3-53P01767 116 aa13.02□□□□□ -0.33
TCF3-216ENST00000592395 ORM1P02763 201 aa13.02□□□□□ -0.33
TCF3-216ENST00000592395 RPL35P42766 123 aaKnown RBP13.02□□□□□ -0.33
TCF3-216ENST00000592395 NHLRC2Q8NBF2 726 aa13.02□□□□□ -0.33
TCF3-216ENST00000592395 C9orf85Q96MD7 179 aa13.02□□□□□ -0.33
TCF3-216ENST00000592395 MLST8Q9BVC4 326 aa13.02□□□□□ -0.33
TCF3-216ENST00000592395 VPS13DQ5THJ4 4388 aa13.02□□□□□ -0.33
TCF3-216ENST00000592395 A0A0J9YY99 117 aa13.01□□□□□ -0.33
TCF3-216ENST00000592395 B4DEV8 164 aa13.01□□□□□ -0.33
TCF3-216ENST00000592395 RNASE3P12724 160 aaKnown RBP13.01□□□□□ -0.33
TCF3-216ENST00000592395 UBE2DNLQ8IWF7 75 aa13.01□□□□□ -0.33
TCF3-216ENST00000592395 LYPD6BQ8NI32 183 aa13.01□□□□□ -0.33
TCF3-216ENST00000592395 DERL1Q9BUN8 251 aa13.01□□□□□ -0.33
TCF3-216ENST00000592395 TRAV4A0A0B4J268 109 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms