RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 DNAH2Q9P225 4427 aa10.51□□□□□ -0.73
ERCC1-213ENST00000592023 TRGV4A0A0C4DH28 118 aa10.5□□□□□ -0.73
ERCC1-213ENST00000592023 A0A1W2PRE2 83 aa10.5□□□□□ -0.73
ERCC1-213ENST00000592023 GCGP01275 180 aa10.5□□□□□ -0.73
ERCC1-213ENST00000592023 IGLV2-11P01706 119 aa10.5□□□□□ -0.73
ERCC1-213ENST00000592023 ZNF80P51504 273 aaPredicted RBP10.5□□□□□ -0.73
ERCC1-213ENST00000592023 FHL2Q14192 279 aa10.5□□□□□ -0.73
ERCC1-213ENST00000592023 ZFP69Q49AA0 526 aa10.5□□□□□ -0.73
ERCC1-213ENST00000592023 C6orf223Q8N319 242 aa10.5□□□□□ -0.73
ERCC1-213ENST00000592023 TMEM75Q8N9X5 138 aa10.5□□□□□ -0.73
ERCC1-213ENST00000592023 ZNF479Q96JC4 524 aa10.5□□□□□ -0.73
ERCC1-213ENST00000592023 UPK3BQ9BT76 320 aa10.5□□□□□ -0.73
ERCC1-213ENST00000592023 Q9H8V8 135 aa10.5□□□□□ -0.73
ERCC1-213ENST00000592023 FAT2Q9NYQ8 4349 aa10.5□□□□□ -0.73
ERCC1-213ENST00000592023 MAP1LC3B2A6NCE7 125 aa10.49□□□□□ -0.73
ERCC1-213ENST00000592023 IFNA7P01567 189 aa10.49□□□□□ -0.73
ERCC1-213ENST00000592023 CRYBA4P53673 196 aa10.49□□□□□ -0.73
ERCC1-213ENST00000592023 RASL10AQ92737 203 aa10.49□□□□□ -0.73
ERCC1-213ENST00000592023 KCNS1Q96KK3 526 aa10.49□□□□□ -0.73
ERCC1-213ENST00000592023 MAP1LC3BQ9GZQ8 125 aa10.49□□□□□ -0.73
ERCC1-213ENST00000592023 HHLA3Q9XRX5 114 aa10.49□□□□□ -0.73
ERCC1-213ENST00000592023 TRAV34A0A0B4J273 112 aa10.48□□□□□ -0.73
ERCC1-213ENST00000592023 M0R2P5 195 aa10.48□□□□□ -0.73
ERCC1-213ENST00000592023 SLAQ13239 276 aa10.48□□□□□ -0.73
ERCC1-213ENST00000592023 ZNF345Q14585 488 aa10.48□□□□□ -0.73
ERCC1-213ENST00000592023 SMUG1Q53HV7 270 aa10.48□□□□□ -0.73
ERCC1-213ENST00000592023 TTC32Q5I0X7 151 aa10.48□□□□□ -0.73
ERCC1-213ENST00000592023 KCNRGQ8N5I3 272 aa10.48□□□□□ -0.73
ERCC1-213ENST00000592023 KRTAP1-5Q9BYS1 174 aa10.48□□□□□ -0.73
ERCC1-213ENST00000592023 C11orf21Q9P2W6 132 aa10.48□□□□□ -0.73
ERCC1-213ENST00000592023 TRAV4A0A0B4J268 109 aa10.47□□□□□ -0.73
ERCC1-213ENST00000592023 FAM74A7A6NL05 159 aa10.47□□□□□ -0.73
ERCC1-213ENST00000592023 PEX7O00628 323 aa10.47□□□□□ -0.73
ERCC1-213ENST00000592023 PFN1P07737 140 aaKnown RBP10.47□□□□□ -0.73
ERCC1-213ENST00000592023 OR11H4Q8NGC9 324 aa10.47□□□□□ -0.73
ERCC1-213ENST00000592023 LINC00479Q96M42 142 aa10.47□□□□□ -0.73
ERCC1-213ENST00000592023 DNAH17Q9UFH2 4485 aa10.47□□□□□ -0.73
ERCC1-213ENST00000592023 FBLL1A6NHQ2 334 aaKnown RBP10.46□□□□□ -0.73
ERCC1-213ENST00000592023 PPT1P50897 306 aa10.46□□□□□ -0.73
ERCC1-213ENST00000592023 TNP2Q05952 138 aa10.46□□□□□ -0.73
ERCC1-213ENST00000592023 Q86TA4 180 aa10.46□□□□□ -0.73
ERCC1-213ENST00000592023 OR4C5Q8NGB2 326 aa10.46□□□□□ -0.73
ERCC1-213ENST00000592023 PCNPQ8WW12 178 aaKnown RBP10.46□□□□□ -0.73
ERCC1-213ENST00000592023 ARL2-SNX15V9GYD0 113 aa10.46□□□□□ -0.73
ERCC1-213ENST00000592023 C9JCJ5 164 aa10.45□□□□□ -0.74
ERCC1-213ENST00000592023 GYPEP15421 78 aa10.45□□□□□ -0.74
ERCC1-213ENST00000592023 FHITP49789 147 aa10.45□□□□□ -0.74
ERCC1-213ENST00000592023 MRPL23Q16540 153 aaKnown RBP10.45□□□□□ -0.74
ERCC1-213ENST00000592023 SAPCD1Q5SSQ6 148 aa10.45□□□□□ -0.74
ERCC1-213ENST00000592023 ZNF471Q9BX82 626 aaPredicted RBP10.45□□□□□ -0.74
ERCC1-213ENST00000592023 KANTRA0A1W2PQU2 76 aa10.44□□□□□ -0.74
ERCC1-213ENST00000592023 HMSDA8MTL9 139 aa10.44□□□□□ -0.74
ERCC1-213ENST00000592023 K7EQD1 137 aa10.44□□□□□ -0.74
ERCC1-213ENST00000592023 BCL2L11O43521 198 aa10.44□□□□□ -0.74
ERCC1-213ENST00000592023 NXPH4O95158 308 aa10.44□□□□□ -0.74
ERCC1-213ENST00000592023 SRIP30626 198 aa10.44□□□□□ -0.74
ERCC1-213ENST00000592023 STOML3Q8TAV4 291 aa10.44□□□□□ -0.74
ERCC1-213ENST00000592023 FAM213BQ8TBF2 198 aa10.44□□□□□ -0.74
ERCC1-213ENST00000592023 A0A1B0GV50 99 aa10.43□□□□□ -0.74
ERCC1-213ENST00000592023 ZNF876PQ49A33 203 aa10.43□□□□□ -0.74
ERCC1-213ENST00000592023 NEGR1Q7Z3B1 354 aa10.43□□□□□ -0.74
ERCC1-213ENST00000592023 ZNF575Q86XF7 245 aa10.43□□□□□ -0.74
ERCC1-213ENST00000592023 HIST1H2BAQ96A08 127 aa10.43□□□□□ -0.74
ERCC1-213ENST00000592023 C9orf85Q96MD7 179 aa10.43□□□□□ -0.74
ERCC1-213ENST00000592023 NKX6-2Q9C056 277 aaPredicted RBP10.43□□□□□ -0.74
ERCC1-213ENST00000592023 A0A0D9SG52 128 aa10.42□□□□□ -0.74
ERCC1-213ENST00000592023 LOC100131303A0A0U1RQF7 123 aa10.42□□□□□ -0.74
ERCC1-213ENST00000592023 A0A1W2PPQ1 181 aa10.42□□□□□ -0.74
ERCC1-213ENST00000592023 SIVA1O15304 175 aa10.42□□□□□ -0.74
ERCC1-213ENST00000592023 ORM1P02763 201 aa10.42□□□□□ -0.74
ERCC1-213ENST00000592023 SEC11BP0C7V7 166 aa10.42□□□□□ -0.74
ERCC1-213ENST00000592023 CST9LP1Q5W188 147 aa10.42□□□□□ -0.74
ERCC1-213ENST00000592023 LYPD5Q6UWN5 251 aa10.42□□□□□ -0.74
ERCC1-213ENST00000592023 HERC2O95714 4834 aa10.41□□□□□ -0.74
ERCC1-213ENST00000592023 PFDN1O60925 122 aa10.41□□□□□ -0.74
ERCC1-213ENST00000592023 RNASE3P12724 160 aaKnown RBP10.41□□□□□ -0.74
ERCC1-213ENST00000592023 UBE2G1P62253 170 aa10.41□□□□□ -0.74
ERCC1-213ENST00000592023 ZNF506Q5JVG8 444 aa10.41□□□□□ -0.74
ERCC1-213ENST00000592023 DPPA3Q6W0C5 159 aa10.41□□□□□ -0.74
ERCC1-213ENST00000592023 SFT2D1Q8WV19 159 aa10.41□□□□□ -0.74
ERCC1-213ENST00000592023 ZC2HC1AQ96GY0 325 aa10.41□□□□□ -0.74
ERCC1-213ENST00000592023 IGHV3-73A0A0B4J1V6 119 aa10.4□□□□□ -0.74
ERCC1-213ENST00000592023 IGKV3D-20A0A0C4DH25 116 aa10.4□□□□□ -0.74
ERCC1-213ENST00000592023 PGPEP1LA6NFU8 196 aa10.4□□□□□ -0.74
ERCC1-213ENST00000592023 UMAD1C9J7I0 102 aa10.4□□□□□ -0.74
ERCC1-213ENST00000592023 PAGE4O60829 102 aa10.4□□□□□ -0.74
ERCC1-213ENST00000592023 GATA1P15976 413 aaPredicted RBP10.4□□□□□ -0.74
ERCC1-213ENST00000592023 S100A4P26447 101 aaKnown RBP10.4□□□□□ -0.74
ERCC1-213ENST00000592023 AKR1C3P42330 323 aa10.4□□□□□ -0.74
ERCC1-213ENST00000592023 LINC00315P59091 139 aa10.4□□□□□ -0.74
ERCC1-213ENST00000592023 FMC1Q96HJ9 113 aa10.4□□□□□ -0.74
ERCC1-213ENST00000592023 TXNDC17Q9BRA2 123 aa10.4□□□□□ -0.74
ERCC1-213ENST00000592023 FABP5P3A8MUU1 101 aa10.39□□□□□ -0.75
ERCC1-213ENST00000592023 M0R036 132 aa10.39□□□□□ -0.75
ERCC1-213ENST00000592023 RS1O15537 224 aa10.39□□□□□ -0.75
ERCC1-213ENST00000592023 ASIPP42127 132 aa10.39□□□□□ -0.75
ERCC1-213ENST00000592023 EIF5AP63241 154 aaKnown RBP10.39□□□□□ -0.75
ERCC1-213ENST00000592023 CFAP126Q5VTH2 177 aa10.39□□□□□ -0.75
ERCC1-213ENST00000592023 TMUB2Q71RG4 321 aa10.39□□□□□ -0.75
ERCC1-213ENST00000592023 WFDC10BQ8IUB3 73 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms