RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 NKX6-2Q9C056 277 aaPredicted RBP18.9■□□□□ 0.62
SMAD4-213ENST00000591914 BCL2L11O43521 198 aa18.89■□□□□ 0.61
SMAD4-213ENST00000591914 IGHV3-53P01767 116 aa18.89■□□□□ 0.61
SMAD4-213ENST00000591914 SEC11BP0C7V7 166 aa18.89■□□□□ 0.61
SMAD4-213ENST00000591914 PRNTQ86SH4 94 aa18.89■□□□□ 0.61
SMAD4-213ENST00000591914 KCNS1Q96KK3 526 aa18.89■□□□□ 0.61
SMAD4-213ENST00000591914 SDF2L1Q9HCN8 221 aa18.89■□□□□ 0.61
SMAD4-213ENST00000591914 IFNA7P01567 189 aa18.88■□□□□ 0.61
SMAD4-213ENST00000591914 TYMSP04818 313 aa18.88■□□□□ 0.61
SMAD4-213ENST00000591914 FHITP49789 147 aa18.88■□□□□ 0.61
SMAD4-213ENST00000591914 LINC00479Q96M42 142 aa18.88■□□□□ 0.61
SMAD4-213ENST00000591914 DNAH17Q9UFH2 4485 aa18.88■□□□□ 0.61
SMAD4-213ENST00000591914 GCGP01275 180 aa18.87■□□□□ 0.61
SMAD4-213ENST00000591914 FHL2Q14192 279 aa18.87■□□□□ 0.61
SMAD4-213ENST00000591914 SAPCD1Q5SSQ6 148 aa18.87■□□□□ 0.61
SMAD4-213ENST00000591914 C11orf21Q9P2W6 132 aa18.87■□□□□ 0.61
SMAD4-213ENST00000591914 A0A096LPF7 62 aa18.86■□□□□ 0.61
SMAD4-213ENST00000591914 KANTRA0A1W2PQU2 76 aa18.86■□□□□ 0.61
SMAD4-213ENST00000591914 PEX7O00628 323 aa18.86■□□□□ 0.61
SMAD4-213ENST00000591914 PFN1P07737 140 aaKnown RBP18.86■□□□□ 0.61
SMAD4-213ENST00000591914 SLAQ13239 276 aa18.86■□□□□ 0.61
SMAD4-213ENST00000591914 ESRGQ1W209 222 aa18.86■□□□□ 0.61
SMAD4-213ENST00000591914 ZFP69Q49AA0 526 aa18.86■□□□□ 0.61
SMAD4-213ENST00000591914 SMUG1Q53HV7 270 aa18.86■□□□□ 0.61
SMAD4-213ENST00000591914 ZNF471Q9BX82 626 aaPredicted RBP18.86■□□□□ 0.61
SMAD4-213ENST00000591914 PRO0255Q9UI72 69 aa18.86■□□□□ 0.61
SMAD4-213ENST00000591914 TRAV34A0A0B4J273 112 aa18.85■□□□□ 0.61
SMAD4-213ENST00000591914 UMAD1C9J7I0 102 aa18.85■□□□□ 0.61
SMAD4-213ENST00000591914 PAX4O43316 350 aa18.85■□□□□ 0.61
SMAD4-213ENST00000591914 STOML3Q8TAV4 291 aa18.85■□□□□ 0.61
SMAD4-213ENST00000591914 HIST1H2BAQ96A08 127 aa18.85■□□□□ 0.61
SMAD4-213ENST00000591914 NBDYA0A0U1RRE5 68 aa18.84■□□□□ 0.61
SMAD4-213ENST00000591914 M0R2P5 195 aa18.84■□□□□ 0.61
SMAD4-213ENST00000591914 PPT1P50897 306 aa18.84■□□□□ 0.61
SMAD4-213ENST00000591914 CRYBA4P53673 196 aa18.84■□□□□ 0.61
SMAD4-213ENST00000591914 HHLA3Q9XRX5 114 aa18.84■□□□□ 0.61
SMAD4-213ENST00000591914 ZNF479Q96JC4 524 aa18.83■□□□□ 0.6
SMAD4-213ENST00000591914 UPK3BQ9BT76 320 aa18.83■□□□□ 0.6
SMAD4-213ENST00000591914 ARL2-SNX15V9GYD0 113 aa18.83■□□□□ 0.6
SMAD4-213ENST00000591914 SFTA3P0C7M3 94 aa18.82■□□□□ 0.6
SMAD4-213ENST00000591914 TMUB2Q71RG4 321 aa18.82■□□□□ 0.6
SMAD4-213ENST00000591914 MBD3L1Q8WWY6 194 aa18.82■□□□□ 0.6
SMAD4-213ENST00000591914 MRPS16Q9Y3D3 137 aaKnown RBP18.82■□□□□ 0.6
SMAD4-213ENST00000591914 PRSS29PA6NIE9 313 aa18.81■□□□□ 0.6
SMAD4-213ENST00000591914 EIF5AP63241 154 aaKnown RBP18.81■□□□□ 0.6
SMAD4-213ENST00000591914 SOHLH1Q5JUK2 328 aa18.81■□□□□ 0.6
SMAD4-213ENST00000591914 C1orf134Q5TEV5 83 aa18.81■□□□□ 0.6
SMAD4-213ENST00000591914 Q86TA4 180 aa18.81■□□□□ 0.6
SMAD4-213ENST00000591914 FAM213BQ8TBF2 198 aa18.81■□□□□ 0.6
SMAD4-213ENST00000591914 TCEAL7Q9BRU2 100 aa18.81■□□□□ 0.6
SMAD4-213ENST00000591914 Q9H8V8 135 aa18.81■□□□□ 0.6
SMAD4-213ENST00000591914 ICOSQ9Y6W8 199 aa18.81■□□□□ 0.6
SMAD4-213ENST00000591914 TRAV4A0A0B4J268 109 aa18.8■□□□□ 0.6
SMAD4-213ENST00000591914 TRGV4A0A0C4DH28 118 aa18.8■□□□□ 0.6
SMAD4-213ENST00000591914 A0A1B0GVY2 172 aa18.8■□□□□ 0.6
SMAD4-213ENST00000591914 DPPA3Q6W0C5 159 aa18.8■□□□□ 0.6
SMAD4-213ENST00000591914 PFDN1O60925 122 aa18.79■□□□□ 0.6
SMAD4-213ENST00000591914 SFT2D1Q8WV19 159 aa18.79■□□□□ 0.6
SMAD4-213ENST00000591914 TCTE3Q8IZS6 198 aa18.78■□□□□ 0.6
SMAD4-213ENST00000591914 TPT1P13693 172 aaKnown RBP18.77■□□□□ 0.6
SMAD4-213ENST00000591914 CST9LP1Q5W188 147 aa18.77■□□□□ 0.6
SMAD4-213ENST00000591914 Q6ZNX1 250 aa18.77■□□□□ 0.6
SMAD4-213ENST00000591914 OR4C5Q8NGB2 326 aa18.77■□□□□ 0.6
SMAD4-213ENST00000591914 FMC1Q96HJ9 113 aa18.77■□□□□ 0.6
SMAD4-213ENST00000591914 C9orf85Q96MD7 179 aa18.77■□□□□ 0.6
SMAD4-213ENST00000591914 MRPL23Q16540 153 aaKnown RBP18.76■□□□□ 0.59
SMAD4-213ENST00000591914 COX8CQ7Z4L0 72 aa18.76■□□□□ 0.59
SMAD4-213ENST00000591914 ZFP30Q9Y2G7 519 aa18.76■□□□□ 0.59
SMAD4-213ENST00000591914 FABP5P3A8MUU1 101 aa18.75■□□□□ 0.59
SMAD4-213ENST00000591914 PAGE4O60829 102 aa18.75■□□□□ 0.59
SMAD4-213ENST00000591914 ZNF876PQ49A33 203 aa18.75■□□□□ 0.59
SMAD4-213ENST00000591914 IGKV3D-20A0A0C4DH25 116 aa18.74■□□□□ 0.59
SMAD4-213ENST00000591914 TRBV6-1A0A0K0K1D8 114 aa18.74■□□□□ 0.59
SMAD4-213ENST00000591914 RNASE3P12724 160 aaKnown RBP18.74■□□□□ 0.59
SMAD4-213ENST00000591914 PTH2Q96A98 100 aa18.74■□□□□ 0.59
SMAD4-213ENST00000591914 PKHD1P08F94 4074 aa18.74■□□□□ 0.59
SMAD4-213ENST00000591914 H2AFB1P0C5Y9 115 aa18.73■□□□□ 0.59
SMAD4-213ENST00000591914 UBE2G1P62253 170 aa18.73■□□□□ 0.59
SMAD4-213ENST00000591914 LGALSLQ3ZCW2 172 aaPredicted RBP18.73■□□□□ 0.59
SMAD4-213ENST00000591914 TTC32Q5I0X7 151 aa18.73■□□□□ 0.59
SMAD4-213ENST00000591914 C6orf223Q8N319 242 aa18.73■□□□□ 0.59
SMAD4-213ENST00000591914 ZC2HC1AQ96GY0 325 aa18.73■□□□□ 0.59
SMAD4-213ENST00000591914 KRTAP1-5Q9BYS1 174 aa18.73■□□□□ 0.59
SMAD4-213ENST00000591914 PKD1P98161 4303 aa18.73■□□□□ 0.59
SMAD4-213ENST00000591914 A0A1B0GV50 99 aa18.72■□□□□ 0.59
SMAD4-213ENST00000591914 C9JCJ5 164 aa18.72■□□□□ 0.59
SMAD4-213ENST00000591914 K7EQD1 137 aa18.72■□□□□ 0.59
SMAD4-213ENST00000591914 ORM1P02763 201 aa18.72■□□□□ 0.59
SMAD4-213ENST00000591914 CRIP1P50238 77 aa18.72■□□□□ 0.59
SMAD4-213ENST00000591914 LTAP01374 205 aa18.71■□□□□ 0.59
SMAD4-213ENST00000591914 NEGR1Q7Z3B1 354 aa18.71■□□□□ 0.59
SMAD4-213ENST00000591914 A0A1W2PPQ1 181 aa18.7■□□□□ 0.58
SMAD4-213ENST00000591914 GYPEP15421 78 aa18.7■□□□□ 0.58
SMAD4-213ENST00000591914 CFAP126Q5VTH2 177 aa18.7■□□□□ 0.58
SMAD4-213ENST00000591914 LYPD5Q6UWN5 251 aa18.7■□□□□ 0.58
SMAD4-213ENST00000591914 PGPEP1LA6NFU8 196 aa18.69■□□□□ 0.58
SMAD4-213ENST00000591914 RS1O15537 224 aa18.69■□□□□ 0.58
SMAD4-213ENST00000591914 C1QBP02746 253 aa18.69■□□□□ 0.58
SMAD4-213ENST00000591914 GATA1P15976 413 aaPredicted RBP18.69■□□□□ 0.58
SMAD4-213ENST00000591914 SRIP30626 198 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms